Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17820

Experiment: 1-ethyl-3-methylimidazolium acetate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 20 mM
3,925,128	+		AO353_17815	0.26	-1.6
3,925,128	+		AO353_17815	0.26	+0.1
3,925,128	+		AO353_17815	0.26	-1.8
3,925,129	-		AO353_17815	0.26	+2.4
3,925,224	+		AO353_17815	0.34	-0.2
3,925,224	+		AO353_17815	0.34	+0.1
3,925,224	+		AO353_17815	0.34	-1.2
3,925,224	+		AO353_17815	0.34	-0.5
3,925,225	-		AO353_17815	0.34	+1.4
3,925,225	-		AO353_17815	0.34	+1.4
3,925,337	+		AO353_17815	0.43	+0.3
3,925,366	+		AO353_17815	0.46	-0.2
3,925,366	+		AO353_17815	0.46	+0.6
3,925,366	+		AO353_17815	0.46	-2.0
3,925,366	+		AO353_17815	0.46	+1.0
3,925,366	+		AO353_17815	0.46	+0.6
3,925,367	-		AO353_17815	0.46	+1.5
3,925,367	-		AO353_17815	0.46	+0.1
3,925,367	-		AO353_17815	0.46	-0.2
3,925,367	-		AO353_17815	0.46	-0.2
3,925,579	+		AO353_17815	0.64	-0.8
3,925,579	+		AO353_17815	0.64	+2.2
3,925,579	+		AO353_17815	0.64	+1.0
3,925,580	-		AO353_17815	0.64	-0.2
3,925,580	-		AO353_17815	0.64	-0.8
3,925,580	-		AO353_17815	0.64	+0.5
3,925,580	-		AO353_17815	0.64	-0.4
3,925,657	+		AO353_17815	0.70	+0.4
3,925,657	+		AO353_17815	0.70	-0.8
3,925,657	+		AO353_17815	0.70	-1.0
3,925,657	+		AO353_17815	0.70	+0.4
3,925,657	+		AO353_17815	0.70	+2.1
3,925,658	-		AO353_17815	0.70	-0.4
3,925,658	-		AO353_17815	0.70	+0.4
3,925,658	-		AO353_17815	0.70	-0.3
3,925,663	+		AO353_17815	0.71	-2.5
3,925,663	+		AO353_17815	0.71	+0.8
3,925,663	+		AO353_17815	0.71	-0.3
3,925,663	+		AO353_17815	0.71	-0.2
3,925,663	+		AO353_17815	0.71	-0.3
3,925,663	+		AO353_17815	0.71	-1.4
3,925,663	+		AO353_17815	0.71	+0.3
3,925,663	+		AO353_17815	0.71	+0.8
3,925,664	-		AO353_17815	0.71	-0.9
3,925,664	-		AO353_17815	0.71	-0.3
3,925,664	-		AO353_17815	0.71	-0.0
3,925,664	-		AO353_17815	0.71	+0.1
3,925,664	-		AO353_17815	0.71	+0.8
3,925,664	-		AO353_17815	0.71	-0.1
3,925,977	-				-0.9
3,925,977	-				-0.8
3,925,977	-				+1.4
3,926,048	+				-0.8
3,926,048	+				+0.3
3,926,048	+				+1.2
3,926,048	+				+0.0
3,926,048	+				+1.0
3,926,048	+				-0.6
3,926,048	+				+1.1
3,926,048	+				-0.2
3,926,048	+				+0.2
3,926,049	-				+1.0
3,926,049	-				-2.4
3,926,049	-				+0.9
3,926,049	-				-0.2
3,926,049	-				-0.2
3,926,049	-				-2.1
3,926,053	+				+1.0
3,926,053	+				-0.2
3,926,053	+				+0.6
3,926,053	+				-0.7
3,926,053	+				+0.5
3,926,053	+				-0.1
3,926,053	+				-1.0
3,926,053	+				-0.4
3,926,053	+				+1.1
3,926,053	+				+0.2
3,926,053	+				+0.2
3,926,053	+				-1.2
3,926,053	+				+0.9
3,926,053	+				-0.1
3,926,053	+				-0.2
3,926,053	+				+0.2
3,926,053	+				+0.4
3,926,053	+				-1.1
3,926,053	+				+0.3
3,926,053	+				+0.2
3,926,053	+				-0.9
3,926,054	-				+0.3
3,926,054	-				+0.1
3,926,054	-				+0.7
3,926,054	-				+0.5
3,926,054	-				+0.4
3,926,054	-				+0.2
3,926,054	-				+0.1
3,926,054	-				+0.0
3,926,054	-				+1.2
3,926,054	-				+0.3
3,926,054	-				-0.2
3,926,054	-				-1.5
3,926,054	-				+1.4
3,926,055	+				+1.0
3,926,055	+				+0.7
3,926,055	+				-0.1
3,926,055	+				-0.4
3,926,055	+				+0.2
3,926,055	+				-0.4
3,926,055	+				-0.2
3,926,055	+				+0.4
3,926,055	+				-1.2
3,926,055	+				+0.8
3,926,055	+				-0.7
3,926,055	+				+2.4
3,926,056	-				-0.6
3,926,056	-				+0.8
3,926,056	-				-1.8
3,926,056	-				+1.6
3,926,056	-				+0.0
3,926,056	-				-2.6
3,926,056	-				+0.4
3,926,056	-				+0.7
3,926,056	-				-0.4
3,926,056	-				+0.0
3,926,056	-				+2.4
3,926,056	-				-0.2
3,926,056	-				+1.2
3,926,059	+				+0.7
3,926,059	+				+0.4
3,926,059	+				+0.6
3,926,059	+				+0.6
3,926,059	+				+1.2
3,926,060	-				+0.8
3,926,060	-				-0.0
3,926,060	-				+1.8
3,926,060	-				+0.8
3,926,060	-				-0.4
3,926,060	-				+0.2
3,926,115	+				+1.8
3,926,115	+				-0.5
3,926,115	+				+0.0
3,926,115	+				+0.8
3,926,116	-				+1.4
3,926,176	+		AO353_17820	0.22	+1.8
3,926,176	+		AO353_17820	0.22	-0.4
3,926,177	-		AO353_17820	0.23	-0.3
3,926,177	-		AO353_17820	0.23	-1.5
3,926,398	+		AO353_17820	0.83	-0.8
3,926,398	+		AO353_17820	0.83	-0.2
3,926,398	+		AO353_17820	0.83	+1.8
3,926,398	+		AO353_17820	0.83	-2.8
3,926,398	+		AO353_17820	0.83	-1.8
3,926,399	-		AO353_17820	0.83	-1.8
3,926,399	-		AO353_17820	0.83	-1.6
3,926,399	-		AO353_17820	0.83	+0.6
3,926,399	-		AO353_17820	0.83	-0.2
3,926,399	-		AO353_17820	0.83	+3.1
3,926,399	-		AO353_17820	0.83	-0.4
3,926,433	+				+1.0
3,926,483	+				-0.2
3,926,483	+				+0.0
3,926,484	-				-2.0
3,926,707	+		AO353_17825	0.24	+2.1
3,926,707	+		AO353_17825	0.24	+0.2
3,926,707	+		AO353_17825	0.24	-0.3
3,926,707	+		AO353_17825	0.24	+2.1
3,926,708	-		AO353_17825	0.25	-0.3
3,926,708	-		AO353_17825	0.25	-2.1
3,926,708	-		AO353_17825	0.25	+0.8
3,926,821	+		AO353_17825	0.37	+0.8
3,926,821	+		AO353_17825	0.37	+0.1
3,926,822	-		AO353_17825	0.37	+0.1
3,926,991	+		AO353_17825	0.55	+0.9
3,926,991	+		AO353_17825	0.55	-0.2
3,926,991	+		AO353_17825	0.55	-0.3
3,926,992	-		AO353_17825	0.55	+1.6
3,926,992	-		AO353_17825	0.55	-0.4
3,927,085	+		AO353_17825	0.65	+0.5
3,927,085	+		AO353_17825	0.65	+0.2
3,927,085	+		AO353_17825	0.65	+0.2
3,927,086	-		AO353_17825	0.65	-1.2
3,927,101	+		AO353_17825	0.67	+0.7
3,927,101	+		AO353_17825	0.67	-1.0
3,927,101	+		AO353_17825	0.67	-0.1
3,927,101	+		AO353_17825	0.67	-1.3
3,927,102	-		AO353_17825	0.67	-0.8
3,927,102	-		AO353_17825	0.67	+0.8
3,927,102	-		AO353_17825	0.67	-1.2
3,927,102	-		AO353_17825	0.67	-2.0
3,927,102	-		AO353_17825	0.67	+0.6
3,927,102	-		AO353_17825	0.67	-0.5
3,927,102	-		AO353_17825	0.67	-1.5
3,927,193	+		AO353_17825	0.76	+1.1
3,927,193	+		AO353_17825	0.76	+0.2
3,927,193	+		AO353_17825	0.76	+1.4
3,927,193	+		AO353_17825	0.76	-0.5
3,927,193	+		AO353_17825	0.76	+0.4
3,927,193	+		AO353_17825	0.76	-0.3
3,927,193	+		AO353_17825	0.76	-1.0
3,927,193	+		AO353_17825	0.76	-0.3
3,927,193	+		AO353_17825	0.76	+0.2
3,927,193	+		AO353_17825	0.76	+0.8
3,927,193	+		AO353_17825	0.76	+0.6
3,927,193	+		AO353_17825	0.76	-0.1
3,927,193	+		AO353_17825	0.76	+1.2
3,927,193	+		AO353_17825	0.76	-0.5
3,927,193	+		AO353_17825	0.76	+1.6
3,927,193	+		AO353_17825	0.76	-0.8
3,927,193	+		AO353_17825	0.76	-1.2
3,927,194	-		AO353_17825	0.76	+0.2
3,927,194	-		AO353_17825	0.76	-1.2
3,927,194	-		AO353_17825	0.76	+0.2
3,927,194	-		AO353_17825	0.76	-0.2
3,927,194	-		AO353_17825	0.76	+2.0
3,927,194	-		AO353_17825	0.76	+0.2
3,927,211	+		AO353_17825	0.78	+1.4
3,927,211	+		AO353_17825	0.78	-0.5
3,927,211	+		AO353_17825	0.78	-1.2
3,927,211	+		AO353_17825	0.78	-0.2
3,927,212	-		AO353_17825	0.78	+0.8
3,927,224	+		AO353_17825	0.80	+2.0
3,927,225	-		AO353_17825	0.80	-0.3
3,927,286	+		AO353_17825	0.86	+1.0
3,927,287	-		AO353_17825	0.86	-0.7
3,927,287	-		AO353_17825	0.86	+0.1
3,927,287	-		AO353_17825	0.86	-1.5
3,927,349	+				+0.2
3,927,349	+				+0.2
3,927,349	+				+0.4
3,927,349	+				+2.4
3,927,349	+				-0.1
3,927,350	-				-0.3
3,927,350	-				-2.8
3,927,350	-				-1.2
3,927,350	-				+0.0
3,927,392	+				-1.7
3,927,393	-				+1.8
3,927,393	-				+0.1
3,927,401	+				-0.5
3,927,401	+				+0.8
3,927,401	+				+2.0
3,927,402	-				-0.2
3,927,402	-				+0.1
3,927,402	-				-0.6
3,927,402	-				-0.4
3,927,417	+				+1.1
3,927,417	+				-1.5
3,927,417	+				-2.2
3,927,418	-				-0.6
3,927,418	-				-1.9
3,927,418	-				+3.4
3,927,420	+				+1.1
3,927,420	+				+0.3
3,927,420	+				+0.2
3,927,420	+				-0.4
3,927,420	+				-1.5
3,927,420	+				-2.0
3,927,420	+				-0.8
3,927,420	+				+1.0
3,927,420	+				+0.8
3,927,420	+				-0.2
3,927,420	+				+0.8
3,927,421	-				+0.2
3,927,421	-				+0.4
3,927,421	-				-0.2
3,927,421	-				-2.2
3,927,421	-				-0.6