Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14755

Experiment: 1-ethyl-3-methylimidazolium acetate 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_14745 and AO353_14750 are separated by 169 nucleotidesAO353_14750 and AO353_14755 are separated by 142 nucleotidesAO353_14755 and AO353_14760 are separated by 46 nucleotidesAO353_14760 and AO353_14765 are separated by 36 nucleotides AO353_14745: AO353_14745 - peptidyl-tRNA hydrolase, at 3,267,512 to 3,268,096 _14745 AO353_14750: AO353_14750 - 50S ribosomal protein L25, at 3,268,266 to 3,268,865 _14750 AO353_14755: AO353_14755 - ribose-phosphate pyrophosphokinase, at 3,269,008 to 3,269,949 _14755 AO353_14760: AO353_14760 - tRNA-Gln, at 3,269,996 to 3,270,070 _14760 AO353_14765: AO353_14765 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, at 3,270,107 to 3,270,958 _14765 Position (kb) 3269 3270Strain fitness (log2 ratio) -1 0 1at 3269.989 kb on - strandat 3269.989 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium acetate 20 mM
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3,269,989 - +1.0
3,269,989 - +1.4

Or see this region's nucleotide sequence