Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11540

Experiment: 1-ethyl-3-methylimidazolium acetate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 20 mM
2,550,142	+		AO353_11530	0.85	+4.2
2,550,162	+		AO353_11530	0.86	+3.4
2,550,162	+		AO353_11530	0.86	+3.1
2,550,162	+		AO353_11530	0.86	+2.8
2,550,162	+		AO353_11530	0.86	+5.2
2,550,162	+		AO353_11530	0.86	+4.3
2,550,163	-		AO353_11530	0.86	+4.9
2,550,163	-		AO353_11530	0.86	+4.1
2,550,163	-		AO353_11530	0.86	+5.6
2,550,163	-		AO353_11530	0.86	+3.6
2,550,163	-		AO353_11530	0.86	+6.5
2,550,163	-		AO353_11530	0.86	+3.1
2,550,163	-		AO353_11530	0.86	+6.3
2,550,163	-		AO353_11530	0.86	+1.6
2,550,163	-		AO353_11530	0.86	+5.2
2,550,506	-				+1.6
2,550,506	-				+5.2
2,550,506	-				+3.2
2,550,524	-				+5.8
2,550,631	-				+3.5
2,550,673	+				-1.4
2,550,673	+				+1.6
2,550,673	+				+2.0
2,550,673	+				-1.8
2,550,673	+				+1.2
2,550,673	+				+2.2
2,550,673	+				-0.7
2,550,673	+				+0.0
2,550,673	+				-1.9
2,550,673	+				-0.4
2,550,673	+				+1.6
2,550,673	+				-0.1
2,550,673	+				-0.4
2,550,673	+				+2.8
2,550,673	+				+1.4
2,550,673	+				+0.1
2,550,673	+				+2.1
2,550,673	+				-0.4
2,550,673	+				+0.3
2,550,673	+				+0.9
2,550,673	+				+3.3
2,550,673	+				+2.0
2,550,673	+				-0.3
2,550,673	+				-1.1
2,550,673	+				+0.6
2,550,674	-				+3.3
2,550,674	-				+1.4
2,550,674	-				+2.2
2,550,674	-				+3.9
2,550,674	-				+4.7
2,550,674	-				+4.8
2,550,674	-				+2.5
2,550,674	-				+4.4
2,550,674	-				+4.0
2,550,674	-				+2.7
2,550,674	-				+2.1
2,550,674	-				+4.9
2,550,674	-				+1.9
2,550,674	-				+5.2
2,550,676	+				-2.0
2,550,676	+				+2.0
2,550,677	-				+3.1
2,550,677	-				+4.7
2,550,693	-				+2.3
2,550,753	+				+2.2
2,550,753	+				+0.6
2,550,753	+				-0.4
2,550,753	+				-2.2
2,550,753	+				-0.1
2,550,753	+				+1.0
2,550,753	+				+1.2
2,550,753	+				+1.5
2,550,753	+				+1.3
2,550,753	+				+1.2
2,550,753	+				-1.1
2,550,753	+				-0.2
2,550,754	-				+3.7
2,550,754	-				+5.5
2,550,754	-				+3.0
2,550,754	-				+1.7
2,550,754	-				+2.7
2,550,754	-				-0.4
2,550,757	+				-0.4
2,550,757	+				+0.3
2,550,834	+		AO353_11535	0.51	+1.2
2,550,928	+				+0.8
2,550,928	+				+0.9
2,550,928	+				+0.1
2,550,929	-				+4.1
2,550,960	+				+1.2
2,550,960	+				+0.3
2,550,961	-				+4.2
2,550,961	-				+4.2
2,551,073	+				+1.5
2,551,073	+				+0.6
2,551,073	+				-2.1
2,551,073	+				+1.9
2,551,073	+				+1.3
2,551,074	-				+3.3
2,551,074	-				+2.5
2,551,074	-				+3.4
2,551,074	-				+4.0
2,551,074	-				+3.2
2,551,074	-				+3.2
2,551,094	+				+0.9
2,551,095	-				+3.2
2,551,115	+		AO353_11540	0.12	+0.4
2,551,115	+		AO353_11540	0.12	+0.5
2,551,116	-		AO353_11540	0.12	+3.6
2,551,116	-		AO353_11540	0.12	-0.4
2,551,124	+		AO353_11540	0.12	+0.3
2,551,124	+		AO353_11540	0.12	-0.8
2,551,124	+		AO353_11540	0.12	+0.8
2,551,124	+		AO353_11540	0.12	-1.3
2,551,125	-		AO353_11540	0.13	+5.0
2,551,125	-		AO353_11540	0.13	+1.5
2,551,125	-		AO353_11540	0.13	+4.5
2,551,125	-		AO353_11540	0.13	+3.6
2,551,125	-		AO353_11540	0.13	+3.1
2,551,125	-		AO353_11540	0.13	-1.1
2,551,349	+		AO353_11540	0.35	-1.4
2,551,349	+		AO353_11540	0.35	-1.1
2,551,350	-		AO353_11540	0.35	+2.5
2,551,350	-		AO353_11540	0.35	+1.6
2,551,500	-		AO353_11540	0.50	+3.2
2,551,544	+		AO353_11540	0.54	+0.9
2,551,544	+		AO353_11540	0.54	+0.9
2,551,544	+		AO353_11540	0.54	-0.1
2,551,544	+		AO353_11540	0.54	+1.0
2,551,544	+		AO353_11540	0.54	-0.0
2,551,544	+		AO353_11540	0.54	+0.6
2,551,545	-		AO353_11540	0.54	+1.6
2,551,545	-		AO353_11540	0.54	+1.8
2,551,606	+		AO353_11540	0.60	-1.4
2,551,606	+		AO353_11540	0.60	+0.3
2,551,606	+		AO353_11540	0.60	+0.5
2,551,606	+		AO353_11540	0.60	-0.2
2,551,606	+		AO353_11540	0.60	-0.0
2,551,606	+		AO353_11540	0.60	+0.5
2,551,607	-		AO353_11540	0.60	+1.9
2,551,607	-		AO353_11540	0.60	+1.2
2,551,607	-		AO353_11540	0.60	+1.8
2,551,607	-		AO353_11540	0.60	-0.0
2,551,607	-		AO353_11540	0.60	+2.8
2,551,799	+		AO353_11540	0.79	+0.5
2,551,799	+		AO353_11540	0.79	+1.0
2,551,799	+		AO353_11540	0.79	+0.5
2,551,799	+		AO353_11540	0.79	+1.0
2,551,800	-		AO353_11540	0.79	+1.4
2,551,800	-		AO353_11540	0.79	+1.6
2,551,814	+		AO353_11540	0.80	+0.2
2,551,815	-		AO353_11540	0.81	+1.7
2,551,815	-		AO353_11540	0.81	+0.3
2,551,815	-		AO353_11540	0.81	+2.1
2,551,815	-		AO353_11540	0.81	+0.5
2,551,815	-		AO353_11540	0.81	+0.4
2,551,815	-		AO353_11540	0.81	+0.9
2,551,815	-		AO353_11540	0.81	-1.6
2,551,815	-		AO353_11540	0.81	+1.2
2,551,886	+		AO353_11540	0.88	+0.7
2,551,886	+		AO353_11540	0.88	-0.6
2,551,887	-		AO353_11540	0.88	+1.4
2,551,887	-		AO353_11540	0.88	+0.1
2,551,887	-		AO353_11540	0.88	-0.5
2,551,997	+				+0.8
2,551,997	+				+0.2
2,551,997	+				+0.1
2,551,997	+				+1.5
2,551,997	+				+0.4
2,551,997	+				-0.2
2,551,998	-				-1.1
2,551,998	-				+1.9
2,551,998	-				+0.8
2,551,998	-				-0.8
2,551,998	-				+1.2
2,551,998	-				-1.6
2,551,998	-				-0.7
2,551,998	-				+1.6
2,552,009	+				+2.0
2,552,010	-				+0.9
2,552,019	+				-0.3
2,552,019	+				-0.4
2,552,019	+				+1.2
2,552,019	+				-0.3
2,552,019	+				+0.2
2,552,020	-				+2.0
2,552,020	-				-1.8
2,552,020	-				+1.8
2,552,020	-				+1.0
2,552,020	-				-1.8
2,552,020	-				+1.0
2,552,020	-				-0.1
2,552,058	+				-0.5
2,552,058	+				+0.8
2,552,059	-				-0.4
2,552,059	-				+1.1
2,552,082	+				+0.4
2,552,082	+				-0.8
2,552,082	+				-1.2
2,552,082	+				+0.7
2,552,082	+				+0.9
2,552,083	-				+0.6
2,552,083	-				-0.5
2,552,083	-				-0.0
2,552,083	-				+0.0
2,552,083	-				-0.3
2,552,083	-				+1.2
2,552,083	-				+0.0
2,552,083	-				+0.9
2,552,083	-				-0.5
2,552,083	-				+0.6
2,552,083	-				-0.2
2,552,094	+				+0.9
2,552,094	+				+0.2
2,552,094	+				-0.4
2,552,094	+				-1.9
2,552,095	-				+0.2
2,552,095	-				+0.7
2,552,095	-				+2.4
2,552,095	-				-1.6
2,552,095	-				-0.1
2,552,095	-				+0.9
2,552,095	-				+1.0
2,552,095	-				+0.8
2,552,134	+				-0.8
2,552,135	-				-1.4
2,552,146	+				-2.8
2,552,146	+				+1.4
2,552,146	+				-0.5
2,552,146	+				-0.4
2,552,147	-				-0.4
2,552,147	-				-0.0
2,552,147	-				+0.2
2,552,147	-				-0.6
2,552,147	-				+1.6
2,552,168	+		AO353_11545	0.10	-0.8
2,552,168	+		AO353_11545	0.10	+0.2
2,552,168	+		AO353_11545	0.10	-0.8
2,552,168	+		AO353_11545	0.10	+0.8
2,552,168	+		AO353_11545	0.10	+1.4
2,552,169	-		AO353_11545	0.11	-1.4
2,552,169	-		AO353_11545	0.11	+1.2
2,552,169	-		AO353_11545	0.11	+1.6
2,552,169	-		AO353_11545	0.11	+2.2
2,552,284	+		AO353_11545	0.25	+1.0
2,552,284	+		AO353_11545	0.25	-0.4
2,552,285	-		AO353_11545	0.25	+0.5
2,552,341	+		AO353_11545	0.32	+1.1
2,552,341	+		AO353_11545	0.32	-1.1
2,552,342	-		AO353_11545	0.32	+1.2
2,552,342	-		AO353_11545	0.32	-0.0
2,552,342	-		AO353_11545	0.32	+1.8
2,552,342	-		AO353_11545	0.32	+3.8
2,552,434	+		AO353_11545	0.43	+0.7
2,552,435	-		AO353_11545	0.43	+0.5
2,552,435	-		AO353_11545	0.43	+0.8
2,552,435	-		AO353_11545	0.43	-1.6
2,552,491	+		AO353_11545	0.50	+1.8
2,552,492	-		AO353_11545	0.50	+0.0
2,552,638	+		AO353_11545	0.68	+0.8
2,552,638	+		AO353_11545	0.68	+1.2
2,552,639	-		AO353_11545	0.68	+0.4
2,552,639	-		AO353_11545	0.68	+1.5
2,552,639	-		AO353_11545	0.68	-0.2
2,552,798	-		AO353_11545	0.87	+2.4
2,552,798	-		AO353_11545	0.87	+0.1
2,552,803	+		AO353_11545	0.88	+0.8
2,552,803	+		AO353_11545	0.88	+0.5
2,552,804	-		AO353_11545	0.88	+1.1
2,552,804	-		AO353_11545	0.88	-0.0
2,552,814	+		AO353_11545	0.89	-0.0
2,552,929	+				+2.2
2,552,929	+				+0.9