Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1968

Experiment: Anaero. fumarate as e acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_1966 and Shewana3_1967 are separated by 187 nucleotidesShewana3_1967 and nrdB are separated by 16 nucleotidesnrdB and Shewana3_1969 are separated by 16 nucleotides Shewana3_1966: Shewana3_1966 - hypothetical protein (RefSeq), at 2,341,027 to 2,341,482 _1966 Shewana3_1967: Shewana3_1967 - ferredoxin (RefSeq), at 2,341,670 to 2,342,080 _1967 Shewana3_1968: nrdB - ribonucleotide-diphosphate reductase subunit beta (RefSeq), at 2,342,097 to 2,343,272 nrdB Shewana3_1969: Shewana3_1969 - ribonucleotide-diphosphate reductase subunit alpha (RefSeq), at 2,343,289 to 2,345,577 _1969 Position (kb) 2342 2343 2344Strain fitness (log2 ratio) -1 0 1at 2341.584 kb on - strandat 2342.023 kb on - strand, within Shewana3_1967

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. fumarate as e acceptor
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2,341,584 - +0.5
2,342,023 - Shewana3_1967 0.86 +0.2

Or see this region's nucleotide sequence