Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_06509

Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_06508 and H281DRAFT_06509 are separated by 409 nucleotidesH281DRAFT_06509 and H281DRAFT_06510 are separated by 338 nucleotides H281DRAFT_06508: H281DRAFT_06508 - putative Mg2+ transporter-C (MgtC) family protein, at 55,534 to 56,241 _06508 H281DRAFT_06509: H281DRAFT_06509 - hypothetical protein, at 56,651 to 57,133 _06509 H281DRAFT_06510: H281DRAFT_06510 - methyl-accepting chemotaxis protein, at 57,472 to 59,037 _06510 Position (kb) 56 57 58Strain fitness (log2 ratio) -2 -1 0 1at 55.692 kb on - strand, within H281DRAFT_06508at 55.803 kb on - strand, within H281DRAFT_06508at 55.811 kb on - strand, within H281DRAFT_06508at 55.966 kb on - strand, within H281DRAFT_06508at 56.049 kb on - strand, within H281DRAFT_06508at 56.298 kb on + strandat 56.494 kb on + strandat 56.681 kb on - strandat 56.814 kb on - strand, within H281DRAFT_06509at 57.290 kb on + strandat 57.440 kb on - strandat 57.713 kb on - strand, within H281DRAFT_06510at 57.907 kb on + strand, within H281DRAFT_06510

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C)
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55,692 - H281DRAFT_06508 0.22 -1.2
55,803 - H281DRAFT_06508 0.38 +0.3
55,811 - H281DRAFT_06508 0.39 +0.3
55,966 - H281DRAFT_06508 0.61 -0.0
56,049 - H281DRAFT_06508 0.73 -2.6
56,298 + +0.1
56,494 + +0.5
56,681 - +0.4
56,814 - H281DRAFT_06509 0.34 +0.7
57,290 + +0.4
57,440 - +0.4
57,713 - H281DRAFT_06510 0.15 +1.0
57,907 + H281DRAFT_06510 0.28 +0.5

Or see this region's nucleotide sequence