Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06030 and H281DRAFT_06031 are separated by 193 nucleotides H281DRAFT_06031 and H281DRAFT_06032 are separated by 171 nucleotides H281DRAFT_06032 and H281DRAFT_06033 are separated by 123 nucleotides
H281DRAFT_06029: H281DRAFT_06029 - homoserine kinase, at 34,319 to 35,314
_06029
H281DRAFT_06030: H281DRAFT_06030 - hypothetical protein, at 35,305 to 36,114
_06030
H281DRAFT_06031: H281DRAFT_06031 - transcriptional regulator, MarR family, at 36,308 to 36,760
_06031
H281DRAFT_06032: H281DRAFT_06032 - peroxiredoxin, Ohr subfamily, at 36,932 to 37,351
_06032
H281DRAFT_06033: H281DRAFT_06033 - deoxyribodipyrimidine photo-lyase type I, at 37,475 to 38,974
_06033
Position (kb) 36
37 Strain fitness (log2 ratio) -1
0
1 at 35.338 kb on + strand at 35.339 kb on - strand at 35.342 kb on + strand at 35.342 kb on + strand at 35.342 kb on + strand at 35.343 kb on - strand at 35.343 kb on - strand at 35.343 kb on - strand at 35.343 kb on - strand at 35.410 kb on + strand, within H281DRAFT_06030 at 35.617 kb on + strand, within H281DRAFT_06030 at 35.617 kb on + strand, within H281DRAFT_06030 at 35.617 kb on + strand, within H281DRAFT_06030 at 35.770 kb on + strand, within H281DRAFT_06030 at 35.771 kb on - strand, within H281DRAFT_06030 at 35.828 kb on + strand, within H281DRAFT_06030 at 35.829 kb on - strand, within H281DRAFT_06030 at 35.927 kb on + strand, within H281DRAFT_06030 at 35.928 kb on - strand, within H281DRAFT_06030 at 35.928 kb on - strand, within H281DRAFT_06030 at 36.028 kb on + strand, within H281DRAFT_06030 at 36.029 kb on - strand, within H281DRAFT_06030 at 36.040 kb on + strand at 36.040 kb on + strand at 36.041 kb on - strand at 36.049 kb on + strand at 36.049 kb on + strand at 36.099 kb on + strand at 36.120 kb on + strand at 36.207 kb on - strand at 36.217 kb on + strand at 36.217 kb on + strand at 36.218 kb on - strand at 36.218 kb on - strand at 36.226 kb on + strand at 36.274 kb on + strand at 36.365 kb on + strand, within H281DRAFT_06031 at 36.366 kb on - strand, within H281DRAFT_06031 at 36.396 kb on - strand, within H281DRAFT_06031 at 36.429 kb on - strand, within H281DRAFT_06031 at 36.438 kb on - strand, within H281DRAFT_06031 at 36.438 kb on - strand, within H281DRAFT_06031 at 36.600 kb on - strand, within H281DRAFT_06031 at 36.747 kb on - strand at 36.747 kb on - strand at 36.747 kb on - strand at 36.944 kb on + strand at 36.990 kb on + strand, within H281DRAFT_06032 at 36.990 kb on + strand, within H281DRAFT_06032 at 37.265 kb on - strand, within H281DRAFT_06032 at 37.312 kb on + strand at 37.312 kb on + strand at 37.349 kb on + strand at 37.401 kb on + strand at 37.414 kb on + strand at 37.458 kb on + strand at 37.459 kb on - strand at 37.459 kb on - strand at 37.565 kb on + strand at 37.565 kb on + strand at 37.566 kb on - strand at 37.616 kb on - strand at 37.616 kb on - strand at 37.642 kb on + strand, within H281DRAFT_06033
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 35,338 + +0.4 35,339 - +1.4 35,342 + -0.0 35,342 + -0.7 35,342 + -0.4 35,343 - +1.1 35,343 - +0.1 35,343 - +0.0 35,343 - -0.6 35,410 + H281DRAFT_06030 0.13 +0.1 35,617 + H281DRAFT_06030 0.39 -0.0 35,617 + H281DRAFT_06030 0.39 +0.5 35,617 + H281DRAFT_06030 0.39 -0.1 35,770 + H281DRAFT_06030 0.57 +0.2 35,771 - H281DRAFT_06030 0.58 +0.1 35,828 + H281DRAFT_06030 0.65 +0.3 35,829 - H281DRAFT_06030 0.65 -0.5 35,927 + H281DRAFT_06030 0.77 +0.1 35,928 - H281DRAFT_06030 0.77 +0.1 35,928 - H281DRAFT_06030 0.77 -0.8 36,028 + H281DRAFT_06030 0.89 -0.5 36,029 - H281DRAFT_06030 0.89 +1.6 36,040 + +0.1 36,040 + -0.3 36,041 - -0.3 36,049 + +0.6 36,049 + +0.2 36,099 + +0.8 36,120 + +0.6 36,207 - +0.4 36,217 + +1.2 36,217 + -0.6 36,218 - +0.7 36,218 - -0.7 36,226 + -0.0 36,274 + +0.5 36,365 + H281DRAFT_06031 0.13 -1.0 36,366 - H281DRAFT_06031 0.13 -1.0 36,396 - H281DRAFT_06031 0.19 -0.2 36,429 - H281DRAFT_06031 0.27 +0.8 36,438 - H281DRAFT_06031 0.29 -0.5 36,438 - H281DRAFT_06031 0.29 -0.2 36,600 - H281DRAFT_06031 0.64 -1.3 36,747 - +0.1 36,747 - -0.3 36,747 - +0.6 36,944 + +0.1 36,990 + H281DRAFT_06032 0.14 +0.8 36,990 + H281DRAFT_06032 0.14 +0.6 37,265 - H281DRAFT_06032 0.79 +0.1 37,312 + -0.2 37,312 + +0.8 37,349 + -0.7 37,401 + +1.4 37,414 + -0.1 37,458 + +0.5 37,459 - -0.3 37,459 - +0.0 37,565 + +0.7 37,565 + -0.3 37,566 - +0.4 37,616 - -0.6 37,616 - -0.8 37,642 + H281DRAFT_06033 0.11 +0.0
Or see this region's nucleotide sequence