Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05693 and H281DRAFT_05694 are separated by 65 nucleotides H281DRAFT_05694 and H281DRAFT_05695 are separated by 200 nucleotides H281DRAFT_05695 and H281DRAFT_05696 are separated by 19 nucleotides
H281DRAFT_05693: H281DRAFT_05693 - glutamyl-tRNA reductase, at 109,511 to 110,797
_05693
H281DRAFT_05694: H281DRAFT_05694 - two component transcriptional regulator, winged helix family, at 110,863 to 111,573
_05694
H281DRAFT_05695: H281DRAFT_05695 - hypothetical protein, at 111,774 to 112,037
_05695
H281DRAFT_05696: H281DRAFT_05696 - Xaa-Pro aminopeptidase, at 112,057 to 113,871
_05696
Position (kb)
111
112
113 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 110.809 kb on - strand at 110.809 kb on - strand at 110.809 kb on - strand at 110.809 kb on - strand at 110.809 kb on - strand at 110.824 kb on - strand at 110.826 kb on + strand at 110.827 kb on - strand at 110.827 kb on - strand at 110.827 kb on - strand at 110.827 kb on - strand at 110.828 kb on + strand at 110.829 kb on - strand at 110.846 kb on + strand at 110.847 kb on - strand at 110.847 kb on - strand at 110.910 kb on - strand at 110.922 kb on - strand at 110.939 kb on + strand, within H281DRAFT_05694 at 111.010 kb on + strand, within H281DRAFT_05694 at 111.046 kb on - strand, within H281DRAFT_05694 at 111.171 kb on - strand, within H281DRAFT_05694 at 111.181 kb on + strand, within H281DRAFT_05694 at 111.182 kb on - strand, within H281DRAFT_05694 at 111.238 kb on + strand, within H281DRAFT_05694 at 111.481 kb on - strand, within H281DRAFT_05694 at 111.546 kb on + strand at 111.546 kb on + strand at 111.547 kb on - strand at 111.547 kb on - strand at 111.624 kb on + strand at 111.624 kb on + strand at 111.625 kb on - strand at 111.625 kb on - strand at 111.625 kb on - strand at 111.625 kb on - strand at 111.626 kb on + strand at 111.626 kb on + strand at 111.627 kb on - strand at 111.627 kb on - strand at 111.627 kb on - strand at 111.627 kb on - strand at 111.635 kb on + strand at 111.653 kb on + strand at 111.714 kb on - strand at 111.714 kb on - strand at 111.898 kb on + strand, within H281DRAFT_05695 at 111.899 kb on - strand, within H281DRAFT_05695 at 111.899 kb on - strand, within H281DRAFT_05695 at 112.039 kb on + strand at 112.040 kb on - strand at 112.077 kb on + strand at 112.077 kb on + strand at 112.181 kb on - strand at 112.247 kb on + strand, within H281DRAFT_05696 at 112.247 kb on + strand, within H281DRAFT_05696 at 112.289 kb on - strand, within H281DRAFT_05696 at 112.711 kb on + strand, within H281DRAFT_05696 at 112.711 kb on + strand, within H281DRAFT_05696 at 112.711 kb on + strand, within H281DRAFT_05696 at 112.711 kb on + strand, within H281DRAFT_05696 at 112.711 kb on + strand, within H281DRAFT_05696 at 112.712 kb on - strand, within H281DRAFT_05696 at 112.712 kb on - strand, within H281DRAFT_05696 at 112.712 kb on - strand, within H281DRAFT_05696 at 112.712 kb on - strand, within H281DRAFT_05696 at 112.838 kb on - strand, within H281DRAFT_05696 at 112.908 kb on + strand, within H281DRAFT_05696 at 112.908 kb on + strand, within H281DRAFT_05696 at 112.909 kb on - strand, within H281DRAFT_05696 at 112.909 kb on - strand, within H281DRAFT_05696 at 112.909 kb on - strand, within H281DRAFT_05696 at 112.912 kb on + strand, within H281DRAFT_05696 at 112.913 kb on - strand, within H281DRAFT_05696 at 112.913 kb on - strand, within H281DRAFT_05696
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 110,809 - +2.4 110,809 - -0.6 110,809 - +1.0 110,809 - +0.2 110,809 - +0.1 110,824 - +0.3 110,826 + -1.9 110,827 - +0.9 110,827 - -0.5 110,827 - +0.2 110,827 - -0.1 110,828 + -0.1 110,829 - +0.8 110,846 + +2.5 110,847 - -1.1 110,847 - +0.9 110,910 - +0.6 110,922 - +0.8 110,939 + H281DRAFT_05694 0.11 -0.6 111,010 + H281DRAFT_05694 0.21 +0.2 111,046 - H281DRAFT_05694 0.26 +0.1 111,171 - H281DRAFT_05694 0.43 -1.3 111,181 + H281DRAFT_05694 0.45 +0.5 111,182 - H281DRAFT_05694 0.45 +1.1 111,238 + H281DRAFT_05694 0.53 +0.1 111,481 - H281DRAFT_05694 0.87 -0.7 111,546 + +0.7 111,546 + -0.1 111,547 - +0.4 111,547 - -0.2 111,624 + +0.3 111,624 + +0.3 111,625 - +0.5 111,625 - -0.5 111,625 - +0.3 111,625 - -0.1 111,626 + -0.0 111,626 + +0.5 111,627 - -1.4 111,627 - -0.3 111,627 - -0.4 111,627 - -0.3 111,635 + +0.7 111,653 + -0.1 111,714 - -0.1 111,714 - -0.3 111,898 + H281DRAFT_05695 0.47 +0.3 111,899 - H281DRAFT_05695 0.47 +1.5 111,899 - H281DRAFT_05695 0.47 +0.1 112,039 + +0.5 112,040 - -1.4 112,077 + +0.5 112,077 + -0.2 112,181 - +1.1 112,247 + H281DRAFT_05696 0.10 +0.0 112,247 + H281DRAFT_05696 0.10 -0.5 112,289 - H281DRAFT_05696 0.13 +1.2 112,711 + H281DRAFT_05696 0.36 -0.1 112,711 + H281DRAFT_05696 0.36 +0.0 112,711 + H281DRAFT_05696 0.36 +0.0 112,711 + H281DRAFT_05696 0.36 -0.4 112,711 + H281DRAFT_05696 0.36 -0.6 112,712 - H281DRAFT_05696 0.36 +1.9 112,712 - H281DRAFT_05696 0.36 +0.2 112,712 - H281DRAFT_05696 0.36 -0.5 112,712 - H281DRAFT_05696 0.36 -0.6 112,838 - H281DRAFT_05696 0.43 +0.9 112,908 + H281DRAFT_05696 0.47 -0.1 112,908 + H281DRAFT_05696 0.47 +0.2 112,909 - H281DRAFT_05696 0.47 -0.6 112,909 - H281DRAFT_05696 0.47 -0.7 112,909 - H281DRAFT_05696 0.47 +0.2 112,912 + H281DRAFT_05696 0.47 +1.7 112,913 - H281DRAFT_05696 0.47 -0.4 112,913 - H281DRAFT_05696 0.47 -0.3
Or see this region's nucleotide sequence