Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05323

Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_05322 and H281DRAFT_05323 are separated by 357 nucleotidesH281DRAFT_05323 and H281DRAFT_05324 overlap by 4 nucleotides H281DRAFT_05322: H281DRAFT_05322 - gluconolactonase (EC 3.1.1.17), at 73,610 to 74,563 _05322 H281DRAFT_05323: H281DRAFT_05323 - hypothetical protein, at 74,921 to 75,211 _05323 H281DRAFT_05324: H281DRAFT_05324 - tripartite ATP-independent transporter solute receptor, DctP family, at 75,208 to 76,203 _05324 Position (kb) 74 75 76Strain fitness (log2 ratio) -1 0 1at 74.169 kb on - strand, within H281DRAFT_05322at 74.169 kb on - strand, within H281DRAFT_05322at 74.319 kb on - strand, within H281DRAFT_05322at 74.729 kb on - strandat 74.826 kb on + strandat 74.982 kb on - strand, within H281DRAFT_05323at 74.982 kb on - strand, within H281DRAFT_05323at 74.982 kb on - strand, within H281DRAFT_05323at 75.772 kb on - strand, within H281DRAFT_05324at 76.013 kb on - strand, within H281DRAFT_05324

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C)
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74,169 - H281DRAFT_05322 0.59 +0.6
74,169 - H281DRAFT_05322 0.59 +1.6
74,319 - H281DRAFT_05322 0.74 -0.1
74,729 - -0.3
74,826 + +0.1
74,982 - H281DRAFT_05323 0.21 -0.7
74,982 - H281DRAFT_05323 0.21 -0.9
74,982 - H281DRAFT_05323 0.21 -0.1
75,772 - H281DRAFT_05324 0.57 -0.3
76,013 - H281DRAFT_05324 0.81 -1.4

Or see this region's nucleotide sequence