Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03984

Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03981 and H281DRAFT_03982 overlap by 1 nucleotidesH281DRAFT_03982 and H281DRAFT_03983 are separated by 2 nucleotidesH281DRAFT_03983 and H281DRAFT_03984 overlap by 26 nucleotidesH281DRAFT_03984 and H281DRAFT_03985 overlap by 17 nucleotides H281DRAFT_03981: H281DRAFT_03981 - Uncharacterized membrane protein, at 89,125 to 89,793 _03981 H281DRAFT_03982: H281DRAFT_03982 - acyl carrier protein, at 89,793 to 90,044 _03982 H281DRAFT_03983: H281DRAFT_03983 - acyl carrier protein, at 90,047 to 90,346 _03983 H281DRAFT_03984: H281DRAFT_03984 - 1-acyl-sn-glycerol-3-phosphate acyltransferases, at 90,321 to 91,115 _03984 H281DRAFT_03985: H281DRAFT_03985 - Beta-ketoacyl synthase, N-terminal domain, at 91,099 to 91,968 _03985 Position (kb) 90 91 92Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 90.323 kb on - strandat 90.366 kb on - strandat 90.659 kb on + strand, within H281DRAFT_03984at 90.660 kb on - strand, within H281DRAFT_03984at 90.660 kb on - strand, within H281DRAFT_03984at 90.660 kb on - strandat 90.661 kb on + strand, within H281DRAFT_03984at 90.725 kb on - strand, within H281DRAFT_03984at 90.832 kb on + strand, within H281DRAFT_03984at 90.832 kb on + strand, within H281DRAFT_03984at 90.850 kb on - strand, within H281DRAFT_03984at 91.096 kb on + strandat 91.285 kb on + strand, within H281DRAFT_03985at 91.538 kb on + strand, within H281DRAFT_03985at 91.821 kb on + strand, within H281DRAFT_03985at 91.822 kb on - strand, within H281DRAFT_03985at 91.864 kb on - strand, within H281DRAFT_03985at 91.922 kb on - strandat 91.969 kb on - strandat 91.969 kb on - strandat 91.969 kb on - strandat 92.027 kb on - strandat 92.027 kb on - strandat 92.061 kb on + strandat 92.066 kb on - strandat 92.066 kb on - strandat 92.090 kb on + strandat 92.090 kb on + strandat 92.091 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C)
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90,323 - +0.8
90,366 - +0.5
90,659 + H281DRAFT_03984 0.43 +0.1
90,660 - H281DRAFT_03984 0.43 +0.2
90,660 - H281DRAFT_03984 0.43 -0.4
90,660 - +1.8
90,661 + H281DRAFT_03984 0.43 +0.0
90,725 - H281DRAFT_03984 0.51 +0.4
90,832 + H281DRAFT_03984 0.64 +0.5
90,832 + H281DRAFT_03984 0.64 -2.8
90,850 - H281DRAFT_03984 0.67 +0.7
91,096 + +0.4
91,285 + H281DRAFT_03985 0.21 +0.1
91,538 + H281DRAFT_03985 0.50 +1.2
91,821 + H281DRAFT_03985 0.83 -0.1
91,822 - H281DRAFT_03985 0.83 -0.2
91,864 - H281DRAFT_03985 0.88 -1.1
91,922 - +0.6
91,969 - +0.4
91,969 - -0.3
91,969 - -0.7
92,027 - -0.2
92,027 - -0.1
92,061 + +0.2
92,066 - +0.1
92,066 - -0.0
92,090 + +0.0
92,090 + -0.3
92,091 - +0.6

Or see this region's nucleotide sequence