Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03523 and H281DRAFT_03524 are separated by 111 nucleotides H281DRAFT_03524 and H281DRAFT_03525 are separated by 218 nucleotides H281DRAFT_03525 and H281DRAFT_03526 are separated by 111 nucleotides H281DRAFT_03526 and H281DRAFT_03527 are separated by 269 nucleotides H281DRAFT_03527 and H281DRAFT_03528 are separated by 39 nucleotides
H281DRAFT_03523: H281DRAFT_03523 - mannose-6-phosphate isomerase, at 22,288 to 23,397
_03523
H281DRAFT_03524: H281DRAFT_03524 - hypothetical protein, at 23,509 to 23,784
_03524
H281DRAFT_03525: H281DRAFT_03525 - cold-shock DNA-binding protein family, at 24,003 to 24,206
_03525
H281DRAFT_03526: H281DRAFT_03526 - methyl-accepting chemotaxis sensory transducer with TarH sensor, at 24,318 to 25,940
_03526
H281DRAFT_03527: H281DRAFT_03527 - uncharacterized domain 1-containing protein, at 26,210 to 26,644
_03527
H281DRAFT_03528: H281DRAFT_03528 - ureidoglycolate lyase, at 26,684 to 27,532
_03528
Position (kb)
24
25
26 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 23.328 kb on - strand at 23.359 kb on + strand at 23.359 kb on + strand at 23.360 kb on - strand at 23.413 kb on + strand at 23.413 kb on + strand at 23.413 kb on + strand at 23.413 kb on + strand at 23.413 kb on + strand at 23.413 kb on + strand at 23.413 kb on + strand at 23.414 kb on - strand at 23.513 kb on + strand at 23.514 kb on - strand at 23.514 kb on - strand at 23.514 kb on - strand at 23.514 kb on - strand at 23.514 kb on - strand at 23.565 kb on + strand, within H281DRAFT_03524 at 23.565 kb on + strand, within H281DRAFT_03524 at 23.566 kb on - strand, within H281DRAFT_03524 at 23.567 kb on + strand, within H281DRAFT_03524 at 23.568 kb on - strand, within H281DRAFT_03524 at 23.568 kb on - strand, within H281DRAFT_03524 at 23.568 kb on - strand, within H281DRAFT_03524 at 23.587 kb on - strand, within H281DRAFT_03524 at 23.758 kb on - strand at 23.774 kb on + strand at 23.774 kb on + strand at 23.774 kb on + strand at 23.805 kb on + strand at 23.805 kb on + strand at 23.805 kb on + strand at 23.805 kb on + strand at 23.805 kb on + strand at 23.805 kb on + strand at 23.805 kb on + strand at 23.805 kb on + strand at 23.881 kb on + strand at 23.889 kb on + strand at 23.889 kb on + strand at 23.912 kb on + strand at 23.912 kb on + strand at 23.923 kb on + strand at 23.923 kb on + strand at 23.923 kb on + strand at 23.924 kb on - strand at 23.924 kb on - strand at 23.924 kb on - strand at 23.924 kb on - strand at 23.961 kb on + strand at 23.961 kb on + strand at 23.979 kb on + strand at 23.979 kb on + strand at 23.979 kb on + strand at 23.980 kb on - strand at 23.980 kb on - strand at 23.980 kb on - strand at 23.991 kb on - strand at 24.015 kb on - strand at 24.016 kb on - strand at 24.029 kb on + strand, within H281DRAFT_03525 at 24.119 kb on + strand, within H281DRAFT_03525 at 24.120 kb on - strand, within H281DRAFT_03525 at 24.204 kb on + strand at 24.204 kb on + strand at 24.204 kb on + strand at 24.208 kb on + strand at 24.208 kb on + strand at 24.209 kb on - strand at 24.209 kb on - strand at 24.217 kb on + strand at 24.217 kb on + strand at 24.234 kb on - strand at 24.248 kb on - strand at 24.250 kb on + strand at 24.827 kb on + strand, within H281DRAFT_03526 at 24.827 kb on + strand, within H281DRAFT_03526 at 24.864 kb on - strand, within H281DRAFT_03526 at 24.915 kb on + strand, within H281DRAFT_03526 at 24.915 kb on + strand, within H281DRAFT_03526 at 24.915 kb on + strand, within H281DRAFT_03526 at 24.916 kb on - strand, within H281DRAFT_03526 at 24.916 kb on - strand, within H281DRAFT_03526 at 25.302 kb on + strand, within H281DRAFT_03526 at 25.323 kb on - strand, within H281DRAFT_03526 at 25.323 kb on - strand, within H281DRAFT_03526 at 25.323 kb on - strand, within H281DRAFT_03526 at 25.469 kb on - strand, within H281DRAFT_03526 at 25.570 kb on + strand, within H281DRAFT_03526 at 25.863 kb on + strand at 25.864 kb on - strand at 25.975 kb on - strand at 25.975 kb on - strand at 25.975 kb on - strand at 26.035 kb on + strand at 26.036 kb on - strand at 26.099 kb on + strand at 26.139 kb on - strand at 26.148 kb on - strand at 26.221 kb on - strand at 26.379 kb on - strand, within H281DRAFT_03527 at 26.379 kb on - strand, within H281DRAFT_03527 at 26.448 kb on - strand, within H281DRAFT_03527 at 26.448 kb on - strand, within H281DRAFT_03527 at 26.460 kb on - strand, within H281DRAFT_03527 at 26.510 kb on + strand, within H281DRAFT_03527 at 26.510 kb on + strand, within H281DRAFT_03527 at 26.511 kb on - strand, within H281DRAFT_03527 at 26.697 kb on + strand at 26.698 kb on - strand at 26.763 kb on + strand at 26.763 kb on + strand at 26.764 kb on - strand at 26.856 kb on + strand, within H281DRAFT_03528 at 26.856 kb on + strand, within H281DRAFT_03528 at 26.856 kb on + strand, within H281DRAFT_03528 at 26.856 kb on + strand, within H281DRAFT_03528 at 26.856 kb on + strand, within H281DRAFT_03528 at 26.857 kb on - strand, within H281DRAFT_03528
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 23,328 - -0.3 23,359 + -0.0 23,359 + +0.1 23,360 - -0.3 23,413 + -0.6 23,413 + -0.2 23,413 + -0.6 23,413 + -0.7 23,413 + -1.1 23,413 + -0.1 23,413 + +0.1 23,414 - -0.6 23,513 + -0.2 23,514 - +0.2 23,514 - -0.1 23,514 - -1.0 23,514 - -0.2 23,514 - +4.2 23,565 + H281DRAFT_03524 0.20 -0.3 23,565 + H281DRAFT_03524 0.20 +0.2 23,566 - H281DRAFT_03524 0.21 -0.2 23,567 + H281DRAFT_03524 0.21 +0.2 23,568 - H281DRAFT_03524 0.21 +0.1 23,568 - H281DRAFT_03524 0.21 -0.2 23,568 - H281DRAFT_03524 0.21 -0.8 23,587 - H281DRAFT_03524 0.28 -0.4 23,758 - -0.2 23,774 + -0.6 23,774 + +0.1 23,774 + -0.1 23,805 + +1.8 23,805 + -0.4 23,805 + -0.1 23,805 + -0.5 23,805 + -0.5 23,805 + +0.5 23,805 + -0.1 23,805 + -0.1 23,881 + -2.2 23,889 + -0.5 23,889 + +0.5 23,912 + +0.0 23,912 + -0.6 23,923 + +0.3 23,923 + -0.3 23,923 + -0.5 23,924 - +2.8 23,924 - -0.5 23,924 - -0.8 23,924 - -0.7 23,961 + +0.1 23,961 + -0.6 23,979 + +1.0 23,979 + -0.6 23,979 + -0.8 23,980 - -0.6 23,980 - -0.3 23,980 - +0.2 23,991 - -0.9 24,015 - -0.3 24,016 - -0.3 24,029 + H281DRAFT_03525 0.13 -0.3 24,119 + H281DRAFT_03525 0.57 +0.0 24,120 - H281DRAFT_03525 0.57 -1.1 24,204 + -0.2 24,204 + -1.0 24,204 + -0.5 24,208 + -0.7 24,208 + -0.8 24,209 - -0.5 24,209 - -0.2 24,217 + -0.8 24,217 + +0.0 24,234 - -0.0 24,248 - -0.6 24,250 + -2.2 24,827 + H281DRAFT_03526 0.31 -0.0 24,827 + H281DRAFT_03526 0.31 +0.3 24,864 - H281DRAFT_03526 0.34 +0.7 24,915 + H281DRAFT_03526 0.37 -0.7 24,915 + H281DRAFT_03526 0.37 -2.2 24,915 + H281DRAFT_03526 0.37 +0.5 24,916 - H281DRAFT_03526 0.37 -1.9 24,916 - H281DRAFT_03526 0.37 -0.6 25,302 + H281DRAFT_03526 0.61 +0.5 25,323 - H281DRAFT_03526 0.62 +0.9 25,323 - H281DRAFT_03526 0.62 -0.8 25,323 - H281DRAFT_03526 0.62 +2.3 25,469 - H281DRAFT_03526 0.71 -0.5 25,570 + H281DRAFT_03526 0.77 -0.8 25,863 + +0.1 25,864 - +0.1 25,975 - -0.3 25,975 - -1.1 25,975 - -0.0 26,035 + -0.4 26,036 - +0.2 26,099 + +1.0 26,139 - +0.1 26,148 - -0.7 26,221 - -0.2 26,379 - H281DRAFT_03527 0.39 +0.2 26,379 - H281DRAFT_03527 0.39 -0.4 26,448 - H281DRAFT_03527 0.55 -0.4 26,448 - H281DRAFT_03527 0.55 +0.1 26,460 - H281DRAFT_03527 0.57 +0.3 26,510 + H281DRAFT_03527 0.69 +0.0 26,510 + H281DRAFT_03527 0.69 -0.4 26,511 - H281DRAFT_03527 0.69 +0.4 26,697 + -0.5 26,698 - -0.1 26,763 + -0.5 26,763 + -0.1 26,764 - -0.6 26,856 + H281DRAFT_03528 0.20 -0.7 26,856 + H281DRAFT_03528 0.20 -0.8 26,856 + H281DRAFT_03528 0.20 -1.1 26,856 + H281DRAFT_03528 0.20 +0.8 26,856 + H281DRAFT_03528 0.20 -1.4 26,857 - H281DRAFT_03528 0.20 -0.6
Or see this region's nucleotide sequence