Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01904 and H281DRAFT_01905 are separated by 30 nucleotides H281DRAFT_01905 and H281DRAFT_01906 are separated by 2 nucleotides H281DRAFT_01906 and H281DRAFT_01907 overlap by 14 nucleotides
H281DRAFT_01904: H281DRAFT_01904 - Cytochrome c, mono- and diheme variants, at 17,226 to 18,560
_01904
H281DRAFT_01905: H281DRAFT_01905 - hypothetical protein, at 18,591 to 18,767
_01905
H281DRAFT_01906: H281DRAFT_01906 - cytochrome c oxidase subunit 2, at 18,770 to 19,351
_01906
H281DRAFT_01907: H281DRAFT_01907 - cytochrome c oxidase subunit 1, at 19,338 to 20,963
_01907
Position (kb) 18
19 Strain fitness (log2 ratio) -2
-1
0
1
2 at 17.638 kb on - strand at 17.662 kb on - strand, within H281DRAFT_01904 at 17.752 kb on + strand, within H281DRAFT_01904 at 17.784 kb on + strand, within H281DRAFT_01904 at 17.785 kb on - strand, within H281DRAFT_01904 at 17.802 kb on + strand, within H281DRAFT_01904 at 17.803 kb on - strand, within H281DRAFT_01904 at 17.866 kb on - strand, within H281DRAFT_01904 at 17.980 kb on - strand, within H281DRAFT_01904 at 18.108 kb on + strand, within H281DRAFT_01904 at 18.108 kb on + strand, within H281DRAFT_01904 at 18.108 kb on + strand, within H281DRAFT_01904 at 18.123 kb on + strand, within H281DRAFT_01904 at 18.124 kb on - strand, within H281DRAFT_01904 at 18.124 kb on - strand, within H281DRAFT_01904 at 18.124 kb on - strand, within H281DRAFT_01904 at 18.124 kb on - strand, within H281DRAFT_01904 at 18.160 kb on - strand, within H281DRAFT_01904 at 18.249 kb on + strand, within H281DRAFT_01904 at 18.250 kb on - strand, within H281DRAFT_01904 at 18.250 kb on - strand, within H281DRAFT_01904 at 18.418 kb on - strand, within H281DRAFT_01904 at 18.473 kb on + strand at 18.473 kb on + strand at 18.474 kb on - strand at 18.477 kb on + strand at 18.477 kb on + strand at 18.477 kb on + strand at 18.477 kb on + strand at 18.478 kb on - strand at 18.478 kb on - strand at 18.478 kb on - strand at 18.478 kb on - strand at 18.478 kb on - strand at 18.559 kb on - strand at 18.640 kb on + strand, within H281DRAFT_01905 at 18.641 kb on - strand, within H281DRAFT_01905 at 18.641 kb on - strand, within H281DRAFT_01905 at 18.729 kb on + strand, within H281DRAFT_01905 at 18.729 kb on + strand, within H281DRAFT_01905 at 18.729 kb on + strand, within H281DRAFT_01905 at 19.050 kb on - strand, within H281DRAFT_01906 at 19.153 kb on + strand, within H281DRAFT_01906 at 19.153 kb on + strand, within H281DRAFT_01906 at 19.154 kb on - strand, within H281DRAFT_01906 at 19.179 kb on - strand at 19.350 kb on - strand at 19.394 kb on + strand at 19.395 kb on - strand at 19.473 kb on + strand at 19.476 kb on + strand at 19.476 kb on + strand at 19.476 kb on + strand at 19.512 kb on + strand, within H281DRAFT_01907 at 19.513 kb on - strand, within H281DRAFT_01907 at 19.680 kb on + strand, within H281DRAFT_01907 at 19.717 kb on - strand, within H281DRAFT_01907 at 19.717 kb on - strand, within H281DRAFT_01907 at 19.736 kb on - strand, within H281DRAFT_01907 at 19.736 kb on - strand, within H281DRAFT_01907
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 17,638 - +1.8 17,662 - H281DRAFT_01904 0.33 +1.2 17,752 + H281DRAFT_01904 0.39 -0.5 17,784 + H281DRAFT_01904 0.42 -0.3 17,785 - H281DRAFT_01904 0.42 -0.2 17,802 + H281DRAFT_01904 0.43 +0.7 17,803 - H281DRAFT_01904 0.43 +1.1 17,866 - H281DRAFT_01904 0.48 +0.2 17,980 - H281DRAFT_01904 0.56 +0.0 18,108 + H281DRAFT_01904 0.66 +0.3 18,108 + H281DRAFT_01904 0.66 +0.3 18,108 + H281DRAFT_01904 0.66 -0.4 18,123 + H281DRAFT_01904 0.67 +0.1 18,124 - H281DRAFT_01904 0.67 +0.3 18,124 - H281DRAFT_01904 0.67 +0.0 18,124 - H281DRAFT_01904 0.67 +1.8 18,124 - H281DRAFT_01904 0.67 +0.3 18,160 - H281DRAFT_01904 0.70 -0.3 18,249 + H281DRAFT_01904 0.77 +0.7 18,250 - H281DRAFT_01904 0.77 -1.4 18,250 - H281DRAFT_01904 0.77 -0.4 18,418 - H281DRAFT_01904 0.89 -0.0 18,473 + -0.0 18,473 + -0.1 18,474 - +0.0 18,477 + +0.4 18,477 + -0.2 18,477 + +0.7 18,477 + -0.2 18,478 - +1.8 18,478 - -0.2 18,478 - +0.5 18,478 - -0.6 18,478 - -0.1 18,559 - +0.7 18,640 + H281DRAFT_01905 0.28 +0.1 18,641 - H281DRAFT_01905 0.28 +1.8 18,641 - H281DRAFT_01905 0.28 -0.1 18,729 + H281DRAFT_01905 0.78 +0.7 18,729 + H281DRAFT_01905 0.78 +0.8 18,729 + H281DRAFT_01905 0.78 +0.5 19,050 - H281DRAFT_01906 0.48 -0.2 19,153 + H281DRAFT_01906 0.66 +0.8 19,153 + H281DRAFT_01906 0.66 -1.2 19,154 - H281DRAFT_01906 0.66 +0.6 19,179 - -1.5 19,350 - -1.7 19,394 + -0.7 19,395 - -1.4 19,473 + +0.5 19,476 + +0.4 19,476 + -0.6 19,476 + +0.2 19,512 + H281DRAFT_01907 0.11 -0.0 19,513 - H281DRAFT_01907 0.11 +0.2 19,680 + H281DRAFT_01907 0.21 +0.4 19,717 - H281DRAFT_01907 0.23 -0.0 19,717 - H281DRAFT_01907 0.23 +0.2 19,736 - H281DRAFT_01907 0.24 -2.3 19,736 - H281DRAFT_01907 0.24 +1.3
Or see this region's nucleotide sequence