Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01848

Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01845 and H281DRAFT_01846 are separated by 11 nucleotidesH281DRAFT_01846 and H281DRAFT_01847 are separated by 87 nucleotidesH281DRAFT_01847 and H281DRAFT_01848 are separated by 156 nucleotidesH281DRAFT_01848 and H281DRAFT_01849 are separated by 83 nucleotides H281DRAFT_01845: H281DRAFT_01845 - hypothetical protein, at 753,435 to 753,611 _01845 H281DRAFT_01846: H281DRAFT_01846 - hypothetical protein, at 753,623 to 753,850 _01846 H281DRAFT_01847: H281DRAFT_01847 - hypothetical protein, at 753,938 to 754,141 _01847 H281DRAFT_01848: H281DRAFT_01848 - hypothetical protein, at 754,298 to 754,621 _01848 H281DRAFT_01849: H281DRAFT_01849 - Protein of unknown function (DUF2950), at 754,705 to 755,640 _01849 Position (kb) 754 755Strain fitness (log2 ratio) -1 0 1 2at 753.306 kb on - strandat 753.620 kb on + strandat 753.620 kb on + strandat 753.620 kb on + strandat 753.621 kb on - strandat 753.629 kb on + strandat 753.827 kb on + strand, within H281DRAFT_01846at 753.922 kb on - strandat 754.208 kb on + strandat 754.209 kb on - strandat 754.217 kb on - strandat 754.403 kb on + strand, within H281DRAFT_01848at 754.404 kb on - strand, within H281DRAFT_01848at 754.408 kb on + strand, within H281DRAFT_01848at 754.590 kb on - strandat 754.814 kb on + strand, within H281DRAFT_01849at 754.888 kb on - strand, within H281DRAFT_01849at 754.922 kb on + strand, within H281DRAFT_01849at 754.929 kb on - strand, within H281DRAFT_01849at 754.973 kb on + strand, within H281DRAFT_01849at 754.973 kb on + strand, within H281DRAFT_01849at 754.973 kb on + strand, within H281DRAFT_01849

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C)
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753,306 - +0.2
753,620 + +0.2
753,620 + +0.2
753,620 + -0.2
753,621 - -1.0
753,629 + +0.4
753,827 + H281DRAFT_01846 0.89 -0.1
753,922 - -0.3
754,208 + -0.7
754,209 - -0.4
754,217 - -0.2
754,403 + H281DRAFT_01848 0.32 +1.8
754,404 - H281DRAFT_01848 0.33 -0.1
754,408 + H281DRAFT_01848 0.34 +0.6
754,590 - -0.3
754,814 + H281DRAFT_01849 0.12 +0.4
754,888 - H281DRAFT_01849 0.20 +0.5
754,922 + H281DRAFT_01849 0.23 -0.5
754,929 - H281DRAFT_01849 0.24 +0.3
754,973 + H281DRAFT_01849 0.29 -0.3
754,973 + H281DRAFT_01849 0.29 -1.6
754,973 + H281DRAFT_01849 0.29 -0.2

Or see this region's nucleotide sequence