Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01782 and H281DRAFT_01783 are separated by 115 nucleotides H281DRAFT_01783 and H281DRAFT_01784 are separated by 117 nucleotides H281DRAFT_01784 and H281DRAFT_01785 are separated by 160 nucleotides H281DRAFT_01785 and H281DRAFT_01786 overlap by 4 nucleotides
H281DRAFT_01782: H281DRAFT_01782 - Predicted arabinose efflux permease, MFS family, at 684,387 to 685,697
_01782
H281DRAFT_01783: H281DRAFT_01783 - Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding, at 685,813 to 686,397
_01783
H281DRAFT_01784: H281DRAFT_01784 - Pimeloyl-ACP methyl ester carboxylesterase, at 686,515 to 687,387
_01784
H281DRAFT_01785: H281DRAFT_01785 - hypothetical protein, at 687,548 to 688,192
_01785
H281DRAFT_01786: H281DRAFT_01786 - RNA polymerase sigma-70 factor, ECF subfamily, at 688,189 to 688,779
_01786
Position (kb) 686
687
688 Strain fitness (log2 ratio) -1
0
1 at 685.711 kb on - strand at 685.929 kb on - strand, within H281DRAFT_01783 at 686.072 kb on + strand, within H281DRAFT_01783 at 686.072 kb on + strand, within H281DRAFT_01783 at 686.073 kb on - strand, within H281DRAFT_01783 at 686.073 kb on - strand, within H281DRAFT_01783 at 686.073 kb on - strand, within H281DRAFT_01783 at 686.276 kb on + strand, within H281DRAFT_01783 at 686.285 kb on - strand, within H281DRAFT_01783 at 686.647 kb on - strand, within H281DRAFT_01784 at 686.936 kb on + strand, within H281DRAFT_01784 at 687.144 kb on - strand, within H281DRAFT_01784 at 687.211 kb on - strand, within H281DRAFT_01784 at 687.245 kb on + strand, within H281DRAFT_01784 at 688.309 kb on + strand, within H281DRAFT_01786 at 688.310 kb on - strand, within H281DRAFT_01786 at 688.310 kb on - strand, within H281DRAFT_01786
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 685,711 - +0.6 685,929 - H281DRAFT_01783 0.20 -0.4 686,072 + H281DRAFT_01783 0.44 -0.6 686,072 + H281DRAFT_01783 0.44 -0.2 686,073 - H281DRAFT_01783 0.44 -0.0 686,073 - H281DRAFT_01783 0.44 +0.9 686,073 - H281DRAFT_01783 0.44 +0.2 686,276 + H281DRAFT_01783 0.79 -0.8 686,285 - H281DRAFT_01783 0.81 +0.9 686,647 - H281DRAFT_01784 0.15 +0.1 686,936 + H281DRAFT_01784 0.48 +0.7 687,144 - H281DRAFT_01784 0.72 +1.7 687,211 - H281DRAFT_01784 0.80 +0.4 687,245 + H281DRAFT_01784 0.84 +0.1 688,309 + H281DRAFT_01786 0.20 +0.2 688,310 - H281DRAFT_01786 0.20 -0.3 688,310 - H281DRAFT_01786 0.20 -0.1
Or see this region's nucleotide sequence