Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01434

Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01433 and H281DRAFT_01434 are separated by 106 nucleotidesH281DRAFT_01434 and H281DRAFT_01435 are separated by 177 nucleotides H281DRAFT_01433: H281DRAFT_01433 - polysaccharide transporter, PST family, at 289,418 to 290,734 _01433 H281DRAFT_01434: H281DRAFT_01434 - phosphate:Na+ symporter, at 290,841 to 292,538 _01434 H281DRAFT_01435: H281DRAFT_01435 - H+/gluconate symporter, at 292,716 to 294,215 _01435 Position (kb) 290 291 292 293Strain fitness (log2 ratio) -2 -1 0 1at 289.927 kb on - strand, within H281DRAFT_01433at 290.044 kb on - strand, within H281DRAFT_01433at 290.125 kb on - strand, within H281DRAFT_01433at 290.148 kb on - strand, within H281DRAFT_01433at 290.179 kb on - strand, within H281DRAFT_01433at 290.313 kb on + strandat 290.314 kb on - strand, within H281DRAFT_01433at 290.314 kb on - strand, within H281DRAFT_01433at 290.317 kb on - strand, within H281DRAFT_01433at 290.349 kb on + strand, within H281DRAFT_01433at 290.349 kb on + strand, within H281DRAFT_01433at 290.394 kb on + strand, within H281DRAFT_01433at 290.395 kb on - strand, within H281DRAFT_01433at 290.395 kb on - strand, within H281DRAFT_01433at 290.524 kb on - strand, within H281DRAFT_01433at 290.681 kb on - strandat 290.732 kb on + strandat 290.733 kb on - strandat 290.733 kb on - strandat 290.790 kb on + strandat 291.064 kb on + strand, within H281DRAFT_01434at 291.064 kb on + strand, within H281DRAFT_01434at 291.177 kb on - strand, within H281DRAFT_01434at 291.336 kb on + strand, within H281DRAFT_01434at 291.577 kb on + strand, within H281DRAFT_01434at 291.578 kb on - strand, within H281DRAFT_01434at 291.578 kb on - strand, within H281DRAFT_01434at 291.731 kb on + strand, within H281DRAFT_01434at 291.741 kb on - strand, within H281DRAFT_01434at 292.059 kb on + strand, within H281DRAFT_01434at 292.060 kb on - strand, within H281DRAFT_01434at 292.114 kb on + strand, within H281DRAFT_01434at 292.167 kb on - strand, within H281DRAFT_01434at 292.378 kb on - strandat 292.399 kb on + strandat 292.399 kb on + strandat 292.537 kb on - strandat 292.692 kb on - strandat 293.321 kb on - strand, within H281DRAFT_01435

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C)
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289,927 - H281DRAFT_01433 0.39 -0.0
290,044 - H281DRAFT_01433 0.48 +0.8
290,125 - H281DRAFT_01433 0.54 -0.1
290,148 - H281DRAFT_01433 0.55 +0.4
290,179 - H281DRAFT_01433 0.58 +0.2
290,313 + +0.0
290,314 - H281DRAFT_01433 0.68 -1.1
290,314 - H281DRAFT_01433 0.68 -0.4
290,317 - H281DRAFT_01433 0.68 +1.0
290,349 + H281DRAFT_01433 0.71 +0.4
290,349 + H281DRAFT_01433 0.71 +0.1
290,394 + H281DRAFT_01433 0.74 +0.1
290,395 - H281DRAFT_01433 0.74 -0.1
290,395 - H281DRAFT_01433 0.74 -0.1
290,524 - H281DRAFT_01433 0.84 +0.3
290,681 - -0.1
290,732 + +0.1
290,733 - -0.6
290,733 - -0.9
290,790 + -0.1
291,064 + H281DRAFT_01434 0.13 +0.0
291,064 + H281DRAFT_01434 0.13 +0.2
291,177 - H281DRAFT_01434 0.20 +0.2
291,336 + H281DRAFT_01434 0.29 -1.8
291,577 + H281DRAFT_01434 0.43 +0.0
291,578 - H281DRAFT_01434 0.43 -0.1
291,578 - H281DRAFT_01434 0.43 -0.2
291,731 + H281DRAFT_01434 0.52 +0.2
291,741 - H281DRAFT_01434 0.53 -1.5
292,059 + H281DRAFT_01434 0.72 +0.2
292,060 - H281DRAFT_01434 0.72 -0.3
292,114 + H281DRAFT_01434 0.75 -0.8
292,167 - H281DRAFT_01434 0.78 -0.4
292,378 - -0.9
292,399 + +0.2
292,399 + -0.1
292,537 - -0.5
292,692 - -1.0
293,321 - H281DRAFT_01435 0.40 -0.8

Or see this region's nucleotide sequence