Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21880

Experiment: 1-ethyl-3-methylimidazolium acetate 15 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 15 mM
4,797,411	+				-0.8
4,797,412	-				-0.4
4,797,412	-				+0.7
4,797,412	-				-0.5
4,797,412	-				+0.7
4,797,421	-				-2.3
4,797,465	+		AO353_21875	0.14	+0.2
4,797,466	-		AO353_21875	0.14	+0.3
4,797,578	+		AO353_21875	0.27	+0.3
4,797,578	+		AO353_21875	0.27	+0.2
4,797,578	+		AO353_21875	0.27	-1.6
4,797,578	+		AO353_21875	0.27	-0.3
4,797,579	-		AO353_21875	0.27	+1.2
4,797,579	-		AO353_21875	0.27	+0.3
4,797,611	+		AO353_21875	0.31	-1.0
4,797,611	+		AO353_21875	0.31	+0.7
4,797,611	+		AO353_21875	0.31	-0.3
4,797,612	-		AO353_21875	0.31	-1.0
4,797,612	-		AO353_21875	0.31	+0.0
4,797,612	-		AO353_21875	0.31	-1.0
4,797,612	-		AO353_21875	0.31	-0.8
4,797,631	-		AO353_21875	0.33	+1.7
4,797,631	-				+0.0
4,797,686	+		AO353_21875	0.39	-0.6
4,797,687	-		AO353_21875	0.39	-0.1
4,797,687	-		AO353_21875	0.39	+0.0
4,797,687	-		AO353_21875	0.39	-0.6
4,797,713	+		AO353_21875	0.42	+0.9
4,797,778	+		AO353_21875	0.49	+0.3
4,797,881	+		AO353_21875	0.61	+0.7
4,797,882	-		AO353_21875	0.61	+0.7
4,797,882	-		AO353_21875	0.61	+0.2
4,797,925	+		AO353_21875	0.66	-0.8
4,797,925	+		AO353_21875	0.66	+1.4
4,797,925	+		AO353_21875	0.66	+0.3
4,797,925	+		AO353_21875	0.66	-0.6
4,797,925	+		AO353_21875	0.66	-0.6
4,797,925	+		AO353_21875	0.66	-0.0
4,797,925	+		AO353_21875	0.66	-1.3
4,797,925	+		AO353_21875	0.66	+0.7
4,797,926	-		AO353_21875	0.66	+0.5
4,797,926	-		AO353_21875	0.66	+0.1
4,797,926	-		AO353_21875	0.66	-0.7
4,797,926	-		AO353_21875	0.66	+1.1
4,797,926	-		AO353_21875	0.66	+0.0
4,797,926	-		AO353_21875	0.66	+0.6
4,797,926	-		AO353_21875	0.66	-0.8
4,797,926	-		AO353_21875	0.66	+0.0
4,797,926	-		AO353_21875	0.66	-0.3
4,797,926	-		AO353_21875	0.66	-1.0
4,797,926	-		AO353_21875	0.66	+0.3
4,797,926	-		AO353_21875	0.66	+0.3
4,797,926	-		AO353_21875	0.66	-0.8
4,797,926	-		AO353_21875	0.66	-2.1
4,797,928	+		AO353_21875	0.66	-0.3
4,797,928	+		AO353_21875	0.66	+0.5
4,797,929	-		AO353_21875	0.66	+0.2
4,797,929	-		AO353_21875	0.66	+1.5
4,797,929	-		AO353_21875	0.66	+0.7
4,797,974	+		AO353_21875	0.71	+1.3
4,797,974	+		AO353_21875	0.71	-0.3
4,797,981	+		AO353_21875	0.72	+0.1
4,797,982	-		AO353_21875	0.72	-1.3
4,798,030	+		AO353_21875	0.78	+0.2
4,798,030	+		AO353_21875	0.78	-0.3
4,798,031	-				+0.7
4,798,031	-		AO353_21875	0.78	+0.7
4,798,031	-		AO353_21875	0.78	-0.4
4,798,031	-		AO353_21875	0.78	-1.6
4,798,031	-		AO353_21875	0.78	-0.3
4,798,090	+		AO353_21875	0.84	-1.3
4,798,090	+		AO353_21875	0.84	-0.7
4,798,090	+		AO353_21875	0.84	-0.5
4,798,090	+		AO353_21875	0.84	-0.3
4,798,090	+		AO353_21875	0.84	-0.1
4,798,091	-		AO353_21875	0.85	-0.4
4,798,091	-		AO353_21875	0.85	+0.1
4,798,094	+		AO353_21875	0.85	-2.6
4,798,094	+				-0.3
4,798,094	+		AO353_21875	0.85	+0.2
4,798,094	+		AO353_21875	0.85	+0.2
4,798,095	-		AO353_21875	0.85	-1.6
4,798,095	-		AO353_21875	0.85	-0.2
4,798,095	-		AO353_21875	0.85	-2.3
4,798,194	+				-1.3
4,798,194	+				+0.3
4,798,194	+				-0.8
4,798,194	+				+0.3
4,798,194	+				+0.4
4,798,194	+				-0.1
4,798,194	+				+1.2
4,798,195	-				+0.0
4,798,195	-				-0.1
4,798,195	-				-0.6
4,798,195	-				-0.6
4,798,195	-				-0.3
4,798,231	+				+0.7
4,798,231	+				-0.4
4,798,232	-				+1.6
4,798,265	+				-1.0
4,798,265	+				+1.3
4,798,266	-				-1.2
4,798,266	-				-1.4
4,798,266	-				-0.4
4,798,266	-				+0.7
4,798,287	+				-0.8
4,798,288	-				+1.3
4,798,288	-				+0.2
4,798,309	+				+0.7
4,798,309	+				-0.3
4,798,310	-				+0.7
4,798,314	+				+0.7
4,798,314	+				-1.0
4,798,314	+				+1.1
4,798,315	-				-0.3
4,798,315	-				+0.3
4,798,326	+				+0.7
4,798,326	+				+2.3
4,798,326	+				+0.7
4,798,326	+				+1.7
4,798,327	-				+2.1
4,798,327	-				-0.3
4,798,327	-				-0.1
4,798,327	-				+0.4
4,798,365	+				-0.3
4,798,365	+				-0.1
4,798,365	+				+1.0
4,798,365	+				-0.4
4,798,366	-				+2.2
4,798,366	-				-0.9
4,798,366	-				+0.4
4,798,366	-				-0.7
4,798,366	-				-0.5
4,798,366	-				+0.7
4,798,391	+				+0.4
4,798,391	+				-0.8
4,798,391	+				-1.0
4,798,392	-				-1.7
4,798,392	-				-0.6
4,798,392	-				+0.0
4,798,395	-				+1.0
4,798,524	+		AO353_21880	0.15	-0.3
4,798,524	+		AO353_21880	0.15	-2.2
4,798,524	+		AO353_21880	0.15	-0.8
4,798,530	+		AO353_21880	0.16	-0.7
4,798,530	+		AO353_21880	0.16	-0.8
4,798,531	-		AO353_21880	0.16	-1.0
4,798,531	-		AO353_21880	0.16	-1.6
4,798,531	-		AO353_21880	0.16	+2.0
4,798,531	-		AO353_21880	0.16	-0.6
4,798,636	-		AO353_21880	0.30	-1.8
4,798,636	-		AO353_21880	0.30	-2.3
4,798,638	+		AO353_21880	0.30	-0.3
4,798,639	-		AO353_21880	0.30	+0.7
4,798,639	-		AO353_21880	0.30	-0.6
4,798,639	-		AO353_21880	0.30	-1.3
4,798,639	-		AO353_21880	0.30	-0.8
4,798,698	+		AO353_21880	0.38	-2.3
4,798,699	-		AO353_21880	0.38	-0.6
4,798,720	+		AO353_21880	0.41	+0.0
4,798,721	-		AO353_21880	0.41	+0.3
4,798,764	+		AO353_21880	0.46	-0.4
4,798,764	+		AO353_21880	0.46	-0.4
4,798,764	+		AO353_21880	0.46	-0.4
4,798,764	+		AO353_21880	0.46	-0.3
4,798,764	+		AO353_21880	0.46	+0.1
4,798,764	+		AO353_21880	0.46	+0.7
4,798,765	-		AO353_21880	0.47	-1.8
4,798,765	-		AO353_21880	0.47	-1.4
4,798,765	-		AO353_21880	0.47	+0.1
4,798,814	-		AO353_21880	0.53	-1.3
4,798,874	-		AO353_21880	0.61	+0.2
4,798,938	+		AO353_21880	0.69	+0.2
4,799,102	+				-1.6
4,799,103	-				-0.3
4,799,103	-				+0.3
4,799,103	-				+1.2
4,799,103	-				-0.3
4,799,103	-				-0.6
4,799,103	-				-0.5
4,799,103	-				-0.0
4,799,175	-				+2.0
4,799,187	-				-0.4
4,799,199	-				-2.1
4,799,202	+				-0.3
4,799,202	+				-0.3
4,799,202	+				-1.4
4,799,202	+				+1.2
4,799,202	+				-0.4
4,799,203	-				+0.7
4,799,236	+				-0.3
4,799,237	-				-0.5
4,799,271	-				+0.2
4,799,328	-				+0.5
4,799,328	-				-1.6
4,799,397	+		AO353_21885	0.15	-0.5
4,799,398	-		AO353_21885	0.15	-3.2
4,799,398	-		AO353_21885	0.15	-0.3
4,799,398	-		AO353_21885	0.15	+1.3
4,799,440	+		AO353_21885	0.20	-0.4
4,799,440	+		AO353_21885	0.20	+0.2
4,799,441	-		AO353_21885	0.20	-0.3
4,799,441	-		AO353_21885	0.20	-0.7
4,799,448	+		AO353_21885	0.21	-1.1
4,799,449	-		AO353_21885	0.21	+0.7
4,799,482	+		AO353_21885	0.24	+0.3
4,799,512	+		AO353_21885	0.28	-0.6
4,799,512	+		AO353_21885	0.28	-0.6
4,799,513	-		AO353_21885	0.28	+0.5
4,799,513	-		AO353_21885	0.28	-1.6
4,799,571	+		AO353_21885	0.34	+2.7
4,799,571	+		AO353_21885	0.34	-0.6
4,799,571	+		AO353_21885	0.34	-0.2
4,799,571	+		AO353_21885	0.34	-2.1
4,799,571	+		AO353_21885	0.34	-0.8
4,799,571	+		AO353_21885	0.34	-0.1
4,799,571	+		AO353_21885	0.34	+0.1
4,799,571	+		AO353_21885	0.34	+0.3
4,799,572	-		AO353_21885	0.34	+2.5
4,799,572	-		AO353_21885	0.34	-0.8
4,799,572	-		AO353_21885	0.34	+1.0
4,799,623	+		AO353_21885	0.40	+0.2
4,799,624	-		AO353_21885	0.40	-0.7
4,799,719	+		AO353_21885	0.51	-0.7
4,799,720	-		AO353_21885	0.51	+0.2
4,799,720	-		AO353_21885	0.51	-1.3
4,799,720	-		AO353_21885	0.51	-0.8
4,799,724	+		AO353_21885	0.51	+1.2
4,799,725	-		AO353_21885	0.51	-0.5
4,799,725	-		AO353_21885	0.51	+0.7
4,799,785	-		AO353_21885	0.58	-1.0
4,799,785	-		AO353_21885	0.58	-0.2
4,799,808	+		AO353_21885	0.61	-0.8
4,799,809	-		AO353_21885	0.61	-2.4
4,799,809	-		AO353_21885	0.61	-0.5
4,799,809	-		AO353_21885	0.61	+0.2
4,799,886	-		AO353_21885	0.69	-0.8
4,800,092	+				+0.2
4,800,092	+				-0.1
4,800,092	+				+1.3
4,800,092	+				+1.0
4,800,092	+				+0.9
4,800,159	+				-0.1
4,800,159	+				+1.1
4,800,159	+				-0.8
4,800,159	+				-0.9