Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04940

Experiment: 1-ethyl-3-methylimidazolium acetate 15 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 15 mM
1,090,036	+		AO353_04930	0.35	-0.9
1,090,036	+		AO353_04930	0.35	+1.1
1,090,037	-		AO353_04930	0.35	+0.8
1,090,037	-		AO353_04930	0.35	-0.9
1,090,044	+		AO353_04930	0.36	-0.5
1,090,044	+		AO353_04930	0.36	-1.0
1,090,045	-		AO353_04930	0.37	-0.9
1,090,123	-		AO353_04930	0.54	-0.1
1,090,302	+				+0.7
1,090,302	+				+0.1
1,090,302	+				+0.1
1,090,303	-				+0.3
1,090,303	-				+1.2
1,090,355	+				-0.5
1,090,355	+				-0.2
1,090,355	+				-0.2
1,090,355	+				+0.1
1,090,356	-				-0.9
1,090,356	-				+0.8
1,090,356	-				-0.2
1,090,371	+				-0.7
1,090,371	+				+1.1
1,090,410	-				+1.2
1,090,410	-				+0.8
1,090,410	-				+1.4
1,090,410	-				+0.9
1,090,447	+				+1.1
1,090,447	+				-0.2
1,090,447	+				+0.2
1,090,447	+				-0.7
1,090,447	+				+0.8
1,090,447	+				-0.0
1,090,448	-				-0.5
1,090,448	-				+0.7
1,090,448	-				+0.7
1,090,448	-				+2.2
1,090,448	-				+0.9
1,090,448	-				+0.7
1,090,448	-				-0.9
1,090,448	-				+0.2
1,090,580	+		AO353_04935	0.20	+1.1
1,090,580	+		AO353_04935	0.20	-1.1
1,090,580	+		AO353_04935	0.20	-0.9
1,090,580	+		AO353_04935	0.20	-0.7
1,090,580	+		AO353_04935	0.20	-0.8
1,090,580	+		AO353_04935	0.20	-1.4
1,090,580	+		AO353_04935	0.20	-1.6
1,090,581	-		AO353_04935	0.20	+0.8
1,090,581	-		AO353_04935	0.20	-0.7
1,090,581	-		AO353_04935	0.20	+0.1
1,090,581	-		AO353_04935	0.20	+0.1
1,090,581	-		AO353_04935	0.20	+2.4
1,090,581	-		AO353_04935	0.20	+0.5
1,090,581	-		AO353_04935	0.20	-0.2
1,090,581	-		AO353_04935	0.20	+0.3
1,090,581	-		AO353_04935	0.20	+1.1
1,090,581	-		AO353_04935	0.20	+1.1
1,090,581	-		AO353_04935	0.20	-0.9
1,090,581	-		AO353_04935	0.20	-0.7
1,090,581	-		AO353_04935	0.20	+1.1
1,090,581	-		AO353_04935	0.20	+0.6
1,090,614	-		AO353_04935	0.27	-1.2
1,090,616	-		AO353_04935	0.27	+0.1
1,090,635	-		AO353_04935	0.31	+1.5
1,090,731	+		AO353_04935	0.51	-2.2
1,090,731	+		AO353_04935	0.51	-1.0
1,090,742	+		AO353_04935	0.54	-0.5
1,090,742	+		AO353_04935	0.54	-2.1
1,090,742	+		AO353_04935	0.54	-2.5
1,090,743	-		AO353_04935	0.54	-0.9
1,090,743	-		AO353_04935	0.54	+0.9
1,090,817	+		AO353_04935	0.70	+1.1
1,090,817	+		AO353_04935	0.70	-0.0
1,090,817	+		AO353_04935	0.70	-0.6
1,090,817	+		AO353_04935	0.70	-1.0
1,090,817	+		AO353_04935	0.70	-1.2
1,090,817	+		AO353_04935	0.70	-2.1
1,090,817	+		AO353_04935	0.70	+0.1
1,090,817	+		AO353_04935	0.70	-0.5
1,090,818	-		AO353_04935	0.70	+1.4
1,090,818	-		AO353_04935	0.70	+2.7
1,090,818	-		AO353_04935	0.70	+0.5
1,090,818	-		AO353_04935	0.70	+0.7
1,090,818	-		AO353_04935	0.70	-0.5
1,090,818	-		AO353_04935	0.70	-0.6
1,090,818	-		AO353_04935	0.70	+0.2
1,090,893	+		AO353_04935	0.86	+0.8
1,090,894	-		AO353_04935	0.86	+0.2
1,090,894	-		AO353_04935	0.86	+2.1
1,090,914	+				+1.1
1,090,914	+				-1.8
1,090,914	+				-0.7
1,090,915	-				+1.1
1,090,915	-				-0.5
1,090,915	-				+0.8
1,090,959	-				+1.1
1,090,959	-				+0.9
1,090,959	-				+1.3
1,090,968	+				-0.3
1,090,968	+				-0.4
1,090,969	-				+1.3
1,090,969	-				+0.6
1,090,969	-				-0.4
1,090,969	-				+1.2
1,090,972	+				+0.5
1,090,972	+				-0.7
1,090,972	+				-1.6
1,090,972	+				-0.2
1,090,973	-				+0.7
1,090,973	-				-0.1
1,090,973	-				-1.7
1,090,973	-				+1.1
1,090,992	+				-0.2
1,090,992	+				-1.5
1,090,992	+				-1.2
1,090,992	+				-0.4
1,090,993	-				+1.7
1,090,996	+				-0.4
1,090,996	+				+1.7
1,090,997	-				+1.5
1,091,146	-		AO353_04940	0.22	+1.2
1,091,279	+		AO353_04940	0.44	-1.1
1,091,279	+		AO353_04940	0.44	+1.5
1,091,279	+		AO353_04940	0.44	-0.5
1,091,279	+		AO353_04940	0.44	+0.9
1,091,279	+		AO353_04940	0.44	+0.3
1,091,279	+		AO353_04940	0.44	+0.5
1,091,279	+		AO353_04940	0.44	+1.3
1,091,280	-		AO353_04940	0.44	+1.7
1,091,280	-		AO353_04940	0.44	+0.8
1,091,280	-		AO353_04940	0.44	+2.0
1,091,280	-		AO353_04940	0.44	+1.1
1,091,280	-		AO353_04940	0.44	-1.2
1,091,280	-		AO353_04940	0.44	-0.5
1,091,280	-		AO353_04940	0.44	+0.8
1,091,367	+		AO353_04940	0.58	-0.0
1,091,409	+		AO353_04940	0.65	-0.1
1,091,410	-		AO353_04940	0.65	-0.0
1,091,410	-		AO353_04940	0.65	+1.8
1,091,420	-		AO353_04940	0.67	+0.1
1,091,420	-		AO353_04940	0.67	+2.3
1,091,516	+		AO353_04940	0.83	+2.1
1,091,516	+		AO353_04940	0.83	-0.1
1,091,516	+		AO353_04940	0.83	-0.7
1,091,517	-		AO353_04940	0.83	+0.1
1,091,517	-		AO353_04940	0.83	+0.2
1,091,517	-		AO353_04940	0.83	-1.0
1,091,519	+		AO353_04940	0.83	+0.4
1,091,519	+		AO353_04940	0.83	+0.1
1,091,519	+		AO353_04940	0.83	+0.1
1,091,519	+		AO353_04940	0.83	+0.8
1,091,520	-		AO353_04940	0.83	+1.1
1,091,525	+		AO353_04940	0.84	-0.5
1,091,573	+				-0.0
1,091,573	+				+0.6
1,091,573	+				+0.1
1,091,573	+				+1.1
1,091,574	-				+1.4
1,091,574	-				+0.6
1,091,574	-				+0.6
1,091,574	-				+2.1
1,091,574	-				-0.2
1,091,574	-				-0.4
1,091,574	-				-0.9
1,091,574	-				+1.3
1,091,574	-				+0.5
1,091,574	-				+1.5
1,091,574	-				+2.3
1,091,692	+				+0.1
1,091,692	+				-2.4
1,091,693	-				+1.3
1,091,693	-				-0.0
1,091,693	-				+2.1
1,091,801	-		AO353_04945	0.19	+0.8
1,091,801	-		AO353_04945	0.19	+0.1
1,091,812	+		AO353_04945	0.20	+1.1
1,091,932	+		AO353_04945	0.32	-0.5
1,091,932	+		AO353_04945	0.32	+1.4
1,091,933	-		AO353_04945	0.32	+1.4
1,091,934	+		AO353_04945	0.33	+0.8
1,091,934	+		AO353_04945	0.33	+0.6
1,091,934	+		AO353_04945	0.33	-0.9
1,091,934	+		AO353_04945	0.33	+0.1
1,091,934	+		AO353_04945	0.33	+0.7
1,091,934	+		AO353_04945	0.33	-0.5
1,091,934	+		AO353_04945	0.33	-0.3
1,091,934	+		AO353_04945	0.33	+1.3
1,091,934	+		AO353_04945	0.33	-1.9
1,091,934	+		AO353_04945	0.33	+1.2
1,091,934	+		AO353_04945	0.33	+1.1
1,091,934	+		AO353_04945	0.33	+1.1
1,091,934	+		AO353_04945	0.33	-1.2
1,091,934	+		AO353_04945	0.33	-0.7
1,091,934	+		AO353_04945	0.33	-0.9
1,091,934	+		AO353_04945	0.33	+0.1
1,091,934	+		AO353_04945	0.33	-0.9
1,091,934	+		AO353_04945	0.33	-0.1
1,091,934	+		AO353_04945	0.33	+1.7
1,091,934	+		AO353_04945	0.33	+2.3
1,091,934	+		AO353_04945	0.33	+0.5
1,091,934	+		AO353_04945	0.33	+1.6
1,091,934	+		AO353_04945	0.33	+1.1
1,091,934	+		AO353_04945	0.33	-0.5
1,091,935	-		AO353_04945	0.33	+2.7
1,091,935	-		AO353_04945	0.33	-0.2
1,091,935	-		AO353_04945	0.33	+1.6
1,091,935	-		AO353_04945	0.33	+2.4
1,091,935	-		AO353_04945	0.33	-1.5
1,091,935	-		AO353_04945	0.33	-1.5
1,091,935	-		AO353_04945	0.33	-0.8
1,091,935	-		AO353_04945	0.33	-1.2
1,091,935	-		AO353_04945	0.33	-0.4
1,091,935	-		AO353_04945	0.33	-0.2
1,091,935	-		AO353_04945	0.33	-0.4
1,091,935	-		AO353_04945	0.33	+1.8
1,091,935	-		AO353_04945	0.33	+0.9
1,091,935	-		AO353_04945	0.33	+0.2
1,091,935	-		AO353_04945	0.33	+1.1
1,091,935	-		AO353_04945	0.33	-0.7
1,091,935	-		AO353_04945	0.33	-0.9
1,091,980	+		AO353_04945	0.37	-0.5
1,092,026	+		AO353_04945	0.42	+0.5
1,092,026	+		AO353_04945	0.42	-0.4
1,092,046	+		AO353_04945	0.44	+1.2
1,092,046	+		AO353_04945	0.44	+0.5
1,092,047	-		AO353_04945	0.44	-2.1
1,092,047	-		AO353_04945	0.44	+0.7
1,092,047	-		AO353_04945	0.44	+1.8
1,092,047	-		AO353_04945	0.44	-0.5
1,092,050	+		AO353_04945	0.45	+1.1
1,092,050	+		AO353_04945	0.45	+0.1
1,092,050	+		AO353_04945	0.45	+1.1
1,092,051	-		AO353_04945	0.45	+0.7
1,092,051	-		AO353_04945	0.45	-0.6
1,092,051	-		AO353_04945	0.45	-0.9
1,092,051	-		AO353_04945	0.45	-0.9
1,092,051	-		AO353_04945	0.45	+0.9
1,092,051	-		AO353_04945	0.45	-0.0
1,092,110	+		AO353_04945	0.51	-2.1
1,092,110	+		AO353_04945	0.51	-0.1
1,092,110	+		AO353_04945	0.51	+0.3
1,092,110	+		AO353_04945	0.51	+1.8
1,092,111	-		AO353_04945	0.51	+1.5
1,092,111	-		AO353_04945	0.51	-1.2
1,092,111	-		AO353_04945	0.51	+0.2
1,092,111	-		AO353_04945	0.51	-0.0
1,092,111	-		AO353_04945	0.51	-1.1
1,092,111	-		AO353_04945	0.51	+0.3
1,092,111	-		AO353_04945	0.51	+0.2
1,092,111	-		AO353_04945	0.51	-0.9
1,092,111	-		AO353_04945	0.51	-0.2
1,092,111	-		AO353_04945	0.51	-0.9
1,092,117	-		AO353_04945	0.52	-1.5
1,092,162	+		AO353_04945	0.57	+0.7
1,092,162	+		AO353_04945	0.57	+1.6
1,092,162	+		AO353_04945	0.57	+0.2
1,092,162	+		AO353_04945	0.57	+1.3
1,092,163	-		AO353_04945	0.57	+1.1
1,092,163	-		AO353_04945	0.57	-1.9
1,092,163	-		AO353_04945	0.57	+0.2
1,092,163	-		AO353_04945	0.57	+0.3
1,092,173	+		AO353_04945	0.58	+0.5
1,092,173	+		AO353_04945	0.58	+1.2
1,092,173	+		AO353_04945	0.58	+0.3
1,092,173	+		AO353_04945	0.58	+0.5
1,092,173	+		AO353_04945	0.58	-0.9
1,092,173	+		AO353_04945	0.58	+1.0
1,092,174	-		AO353_04945	0.58	+0.2
1,092,174	-		AO353_04945	0.58	-0.3
1,092,183	+		AO353_04945	0.59	+0.7
1,092,183	+		AO353_04945	0.59	+0.8
1,092,183	+		AO353_04945	0.59	+0.8
1,092,252	+		AO353_04945	0.66	+1.1
1,092,252	+		AO353_04945	0.66	-0.9
1,092,252	+		AO353_04945	0.66	+1.7
1,092,252	+		AO353_04945	0.66	-1.5
1,092,252	+		AO353_04945	0.66	+1.1
1,092,252	+		AO353_04945	0.66	+0.3
1,092,252	+		AO353_04945	0.66	-0.5
1,092,252	+		AO353_04945	0.66	+0.7
1,092,253	-		AO353_04945	0.66	+2.7
1,092,253	-		AO353_04945	0.66	-0.1
1,092,253	-		AO353_04945	0.66	+0.8
1,092,253	-		AO353_04945	0.66	+0.8
1,092,253	-		AO353_04945	0.66	+0.5
1,092,253	-		AO353_04945	0.66	+2.1
1,092,253	-		AO353_04945	0.66	-0.4
1,092,253	-		AO353_04945	0.66	-0.4
1,092,253	-		AO353_04945	0.66	+1.1
1,092,283	+		AO353_04945	0.69	-0.2
1,092,284	-		AO353_04945	0.69	+0.4
1,092,388	+		AO353_04945	0.80	+0.3
1,092,402	+		AO353_04945	0.82	+1.5
1,092,402	+		AO353_04945	0.82	+2.1
1,092,402	+		AO353_04945	0.82	-0.2
1,092,512	-				-0.0
1,092,559	+				+0.2
1,092,560	-				-2.2
1,092,565	+				-0.7
1,092,565	+				-1.5
1,092,566	-				-1.5
1,092,566	-				-0.9
1,092,566	-				+1.1
1,092,568	+				-1.2
1,092,568	+				-1.5
1,092,569	-				-0.5
1,092,569	-				+0.5
1,092,575	+				-2.2
1,092,575	+				+1.1
1,092,575	+				-1.5
1,092,575	+				+2.1
1,092,576	-				-0.2
1,092,578	+				+3.1
1,092,578	+				+1.7
1,092,578	+				+1.0
1,092,578	+				+1.1
1,092,578	+				-0.5
1,092,578	+				+0.8
1,092,578	+				-0.6
1,092,578	+				+0.4
1,092,578	+				+0.6
1,092,578	+				+0.8
1,092,579	-				-0.9
1,092,579	-				-0.1
1,092,579	-				-0.9
1,092,608	+				-0.5
1,092,608	+				+2.7
1,092,608	+				+1.1