Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_00270

Experiment: 1-ethyl-3-methylimidazolium acetate 15 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 15 mM
46,071	-		AO353_00255	0.44	-0.7
46,071	-		AO353_00255	0.44	+0.8
46,071	-		AO353_00255	0.44	-0.2
46,071	-		AO353_00255	0.44	+1.8
46,071	-		AO353_00255	0.44	-1.2
46,071	-		AO353_00255	0.44	-1.7
46,071	-		AO353_00255	0.44	-0.2
46,075	-		AO353_00255	0.45	+0.8
46,075	-		AO353_00255	0.45	-1.3
46,086	-		AO353_00255	0.47	+0.4
46,086	-		AO353_00255	0.47	-2.1
46,102	-		AO353_00255	0.50	+0.1
46,355	+				+0.3
46,363	+				-0.3
46,364	-				+0.4
46,364	-				-0.5
46,439	+		AO353_00260	0.28	+1.3
46,439	+		AO353_00260	0.28	+1.2
46,440	-		AO353_00260	0.28	+0.4
46,477	+		AO353_00260	0.39	+1.8
46,603	-		AO353_00260	0.73	-0.3
46,603	-		AO353_00260	0.73	+0.3
46,646	-		AO353_00260	0.85	+0.4
46,646	-		AO353_00260	0.85	+0.8
46,700	-				-0.2
46,714	-				+0.8
46,714	-				+1.8
46,714	-				+1.2
46,714	-				+0.4
46,714	-				+0.8
46,880	-		AO353_00265	0.45	-1.5
46,968	-		AO353_00265	0.83	+0.3
46,968	-		AO353_00265	0.83	-1.8
46,968	-		AO353_00265	0.83	+0.0
46,968	-		AO353_00265	0.83	+0.1
47,005	+				-1.5
47,035	+				-0.2
47,035	+				-1.1
47,035	+				-2.0
47,035	+				-0.5
47,035	+				-1.2
47,035	+				-0.5
47,035	+				-1.2
47,036	-				-0.2
47,036	-				+0.5
47,036	-				-1.0
47,036	-				-0.1
47,036	-				+0.7
47,036	-				-0.2
47,038	+				-0.7
47,038	+				+0.8
47,038	+				-0.7
47,039	-				-1.0
47,039	-				-0.4
47,039	-				-0.8
47,088	+				+0.8
47,088	+				-0.7
47,088	+				+0.8
47,088	+				+2.6
47,088	+				+0.3
47,088	+				-0.7
47,088	+				-0.2
47,088	+				-0.2
47,088	+				+1.8
47,089	-				-0.4
47,089	-				+0.8
47,089	-				-1.5
47,089	-				-1.5
47,089	-				-0.2
47,133	+				+1.6
47,133	+				-0.6
47,133	+				-0.9
47,133	+				-2.0
47,133	+				-0.7
47,134	-				-0.2
47,134	-				+1.8
47,134	-				+0.3
47,134	-				+0.2
47,134	-				-0.6
47,192	+				+1.0
47,193	-				-0.1
47,204	-				-0.2
47,204	-				-0.2
47,214	+				+0.1
47,214	+				-0.7
47,215	-				-0.7
47,215	-				-0.5
47,215	-				+0.0
47,215	-				-0.4
47,289	+		AO353_00270	0.10	-0.6
47,290	-		AO353_00270	0.10	+0.0
47,290	-		AO353_00270	0.10	+0.8
47,290	-		AO353_00270	0.10	+0.6
47,316	-		AO353_00270	0.11	+1.2
47,316	-		AO353_00270	0.11	+0.8
47,316	-		AO353_00270	0.11	-0.5
47,339	+		AO353_00270	0.12	-1.2
47,340	-		AO353_00270	0.12	+0.5
47,340	-		AO353_00270	0.12	+1.6
47,352	+		AO353_00270	0.13	+0.8
47,352	+		AO353_00270	0.13	+1.2
47,353	-		AO353_00270	0.13	+1.0
47,353	-		AO353_00270	0.13	-1.9
47,355	+		AO353_00270	0.13	-0.2
47,355	+		AO353_00270	0.13	-0.3
47,356	-		AO353_00270	0.13	-0.2
47,356	-		AO353_00270	0.13	+0.3
47,401	+		AO353_00270	0.15	+0.4
47,487	+		AO353_00270	0.18	-0.6
47,487	+		AO353_00270	0.18	+0.5
47,487	+		AO353_00270	0.18	-0.2
47,488	-		AO353_00270	0.18	-0.2
47,488	-		AO353_00270	0.18	-1.0
47,488	-		AO353_00270	0.18	-0.5
47,488	-		AO353_00270	0.18	+1.3
47,653	+		AO353_00270	0.24	-0.3
47,654	-		AO353_00270	0.24	-0.2
47,721	+		AO353_00270	0.26	+0.5
47,721	+		AO353_00270	0.26	+0.8
47,721	+		AO353_00270	0.26	+0.3
47,721	+		AO353_00270	0.26	-0.2
47,721	+		AO353_00270	0.26	-1.7
47,722	-		AO353_00270	0.26	-0.5
47,722	-		AO353_00270	0.26	+0.2
47,722	-		AO353_00270	0.26	-2.1
47,722	-		AO353_00270	0.26	+0.8
47,722	-		AO353_00270	0.26	+0.0
47,722	-		AO353_00270	0.26	+0.1
47,741	+		AO353_00270	0.27	+0.2
47,884	+		AO353_00270	0.32	+0.1
47,884	+		AO353_00270	0.32	+0.8
47,885	-		AO353_00270	0.32	+0.8
47,885	-		AO353_00270	0.32	+1.1
47,885	-		AO353_00270	0.32	-0.5
47,885	-		AO353_00270	0.32	+0.3
48,030	+		AO353_00270	0.38	+1.1
48,030	+		AO353_00270	0.38	+1.1
48,030	+		AO353_00270	0.38	+1.2
48,031	-		AO353_00270	0.38	-0.0
48,031	-		AO353_00270	0.38	-0.4
48,031	-		AO353_00270	0.38	-1.2
48,031	-		AO353_00270	0.38	+0.0
48,153	-		AO353_00270	0.42	+0.4
48,168	+		AO353_00270	0.43	+0.4
48,168	+		AO353_00270	0.43	-0.4
48,169	-		AO353_00270	0.43	-0.7
48,169	-		AO353_00270	0.43	+1.7
48,169	-		AO353_00270	0.43	+1.1
48,169	-		AO353_00270	0.43	+0.8
48,169	-		AO353_00270	0.43	-0.7
48,171	+		AO353_00270	0.43	+1.4
48,172	-		AO353_00270	0.43	-1.2
48,172	-		AO353_00270	0.43	-0.4
48,205	-		AO353_00270	0.44	+0.2
48,207	+		AO353_00270	0.44	+1.5
48,207	+		AO353_00270	0.44	+0.8
48,207	+		AO353_00270	0.44	+0.8
48,208	-		AO353_00270	0.44	-1.3
48,208	-		AO353_00270	0.44	+1.3
48,245	+		AO353_00270	0.46	+0.8
48,245	+		AO353_00270	0.46	-0.6
48,245	+		AO353_00270	0.46	+2.4
48,245	+		AO353_00270	0.46	+0.8
48,245	+		AO353_00270	0.46	-0.0
48,245	+		AO353_00270	0.46	+1.8
48,246	-		AO353_00270	0.46	+0.8
48,246	-		AO353_00270	0.46	-0.2
48,246	-		AO353_00270	0.46	-1.5
48,246	-		AO353_00270	0.46	-0.0
48,246	-		AO353_00270	0.46	+2.4
48,246	-		AO353_00270	0.46	+0.1
48,246	-		AO353_00270	0.46	+0.8
48,415	-		AO353_00270	0.52	-0.2
48,415	-		AO353_00270	0.52	-1.2
48,415	-		AO353_00270	0.52	+0.8
48,435	+		AO353_00270	0.53	-0.6
48,436	-		AO353_00270	0.53	-1.2
48,436	-		AO353_00270	0.53	+0.8
48,436	-		AO353_00270	0.53	+0.3
48,436	-		AO353_00270	0.53	+0.1
48,452	-		AO353_00270	0.54	-0.7
48,452	-		AO353_00270	0.54	-2.3
48,691	-		AO353_00270	0.62	-1.0
48,691	-		AO353_00270	0.62	+0.3
48,741	-		AO353_00270	0.64	+1.0
48,778	-		AO353_00270	0.66	-0.2
48,907	-		AO353_00270	0.70	+1.8
48,907	-		AO353_00270	0.70	+0.3
48,934	-		AO353_00270	0.71	+0.3
48,934	-		AO353_00270	0.71	-0.4
48,934	-		AO353_00270	0.71	-0.2
48,934	-		AO353_00270	0.71	+1.0
48,934	-		AO353_00270	0.71	+0.4
48,965	-		AO353_00270	0.73	+0.3
49,037	-		AO353_00270	0.75	+1.6
49,037	-		AO353_00270	0.75	+0.8
49,058	-		AO353_00270	0.76	-1.4
49,058	-		AO353_00270	0.76	+1.6
49,058	-		AO353_00270	0.76	+1.1
49,070	-		AO353_00270	0.76	-0.4
49,228	-		AO353_00270	0.82	-0.0
49,228	-		AO353_00270	0.82	+0.1
49,228	-		AO353_00270	0.82	+2.4
49,444	-				-0.2
49,444	-				+1.4
49,444	-				+0.3
49,450	-				+0.8
49,450	-				+0.6
49,662	-				-2.2
49,662	-				-2.1
49,662	-				+0.1
49,761	-				+2.4
49,761	-				-0.4
49,761	-				-0.5
49,761	-				-1.5
49,773	-				-1.2
49,869	-		AO353_00275	0.34	+1.6
49,869	-		AO353_00275	0.34	-0.4
49,883	-		AO353_00275	0.37	-0.7
49,883	-		AO353_00275	0.37	-1.0
49,917	-		AO353_00275	0.46	-0.4
49,934	-		AO353_00275	0.50	-1.7
49,957	-		AO353_00275	0.56	+1.2
49,957	-		AO353_00275	0.56	+0.8
49,957	-		AO353_00275	0.56	-0.7
49,957	-		AO353_00275	0.56	+0.6
49,957	-		AO353_00275	0.56	-1.7
49,957	-		AO353_00275	0.56	-1.2
49,957	-		AO353_00275	0.56	+0.8
49,957	-		AO353_00275	0.56	+0.2
49,957	-		AO353_00275	0.56	-1.0
49,957	-		AO353_00275	0.56	-0.4
49,957	-		AO353_00275	0.56	-2.6
49,957	-		AO353_00275	0.56	-0.7
49,957	-		AO353_00275	0.56	+0.2
49,957	-		AO353_00275	0.56	+0.4
49,957	-		AO353_00275	0.56	+1.3
49,957	-		AO353_00275	0.56	-0.8
49,961	-		AO353_00275	0.57	-0.2
49,961	-		AO353_00275	0.57	+0.5
49,961	-		AO353_00275	0.57	+1.4
49,961	-		AO353_00275	0.57	+1.0
49,961	-		AO353_00275	0.57	+0.0
49,961	-		AO353_00275	0.57	-0.2
49,961	-		AO353_00275	0.57	-1.3
49,961	-		AO353_00275	0.57	-0.4
49,961	-		AO353_00275	0.57	+3.4
49,961	-		AO353_00275	0.57	+0.7
49,961	-		AO353_00275	0.57	+0.1
49,961	-		AO353_00275	0.57	-1.0
49,961	-		AO353_00275	0.57	+0.4
50,085	-		AO353_00275	0.88	-1.2
50,085	-		AO353_00275	0.88	-0.4
50,085	-		AO353_00275	0.88	-0.3
50,085	-		AO353_00275	0.88	+0.4
50,148	-				-0.8
50,205	-				+0.2
50,205	-				+0.3
50,205	-				+0.8
50,464	+				-1.4
50,464	+				-2.0
50,470	+				-1.5
50,470	+				-0.2
50,470	+				-1.7
50,501	+		AO353_00285	0.11	-0.2
50,501	+		AO353_00285	0.11	+0.5
50,501	+		AO353_00285	0.11	+0.4
50,502	-		AO353_00285	0.11	+0.0
50,502	-		AO353_00285	0.11	+0.3
50,502	-		AO353_00285	0.11	-1.2
50,518	+		AO353_00285	0.17	-2.5
50,518	+		AO353_00285	0.17	+0.0
50,519	-		AO353_00285	0.17	+0.7
50,546	+		AO353_00285	0.27	+0.0
50,546	+		AO353_00285	0.27	+2.3
50,546	+		AO353_00285	0.27	-0.7
50,547	-		AO353_00285	0.28	-0.7
50,547	-		AO353_00285	0.28	+0.8
50,547	-		AO353_00285	0.28	+0.4
50,547	-		AO353_00285	0.28	-2.5
50,601	+		AO353_00285	0.47	+1.6
50,602	-		AO353_00285	0.47	+0.8
50,602	-		AO353_00285	0.47	+1.8
50,602	-		AO353_00285	0.47	+0.5
50,602	-		AO353_00285	0.47	+1.8
50,602	-		AO353_00285	0.47	-0.2
50,675	+		AO353_00285	0.74	+1.4
50,675	+		AO353_00285	0.74	-0.2
50,675	+		AO353_00285	0.74	+0.1