Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3612

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,336,433	+		Shewana3_3611	0.64	+0.9
4,336,627	-		Shewana3_3611	0.74	+0.2
4,336,708	-		Shewana3_3611	0.78	-0.2
4,336,708	-		Shewana3_3611	0.78	-0.5
4,336,743	-		Shewana3_3611	0.80	+1.3
4,336,745	+		Shewana3_3611	0.80	-0.3
4,336,863	+		Shewana3_3611	0.86	+0.1
4,336,863	+		Shewana3_3611	0.86	+0.0
4,336,868	-		Shewana3_3611	0.86	-0.1
4,336,871	-		Shewana3_3611	0.87	-0.1
4,336,959	+				-0.2
4,337,067	-				-0.2
4,337,202	+				-0.9
4,337,233	-				-0.0
4,337,233	-				-0.1
4,337,250	+				-0.4
4,337,258	-				+0.1
4,337,268	-				-0.4
4,337,304	+	metF	Shewana3_3612	0.11	-0.4
4,337,312	-	metF	Shewana3_3612	0.12	+0.1
4,337,319	-	metF	Shewana3_3612	0.13	-0.1
4,337,333	+	metF	Shewana3_3612	0.14	+1.2
4,337,434	+	metF	Shewana3_3612	0.26	-0.0
4,337,699	-	metF	Shewana3_3612	0.55	-1.3
4,337,750	+	metF	Shewana3_3612	0.61	-0.7
4,337,804	+	metF	Shewana3_3612	0.67	-0.1
4,337,829	+	metF	Shewana3_3612	0.70	-0.3
4,337,876	+	metF	Shewana3_3612	0.75	+0.5
4,337,959	-	metF	Shewana3_3612	0.84	+0.1
4,337,959	-	metF	Shewana3_3612	0.84	+0.5
4,337,959	-	metF	Shewana3_3612	0.84	+0.3
4,337,992	-	metF	Shewana3_3612	0.88	-0.0
4,338,109	-				-0.3
4,338,368	+				-0.2
4,338,498	+				-0.0
4,338,674	+	metL	Shewana3_3613	0.11	-0.3
4,338,754	+	metL	Shewana3_3613	0.15	-0.5
4,338,754	+	metL	Shewana3_3613	0.15	-0.2
4,338,754	+	metL	Shewana3_3613	0.15	-0.2
4,338,754	+	metL	Shewana3_3613	0.15	+0.0
4,338,754	+	metL	Shewana3_3613	0.15	+0.3
4,338,754	+	metL	Shewana3_3613	0.15	-0.3
4,338,754	+	metL	Shewana3_3613	0.15	-0.7
4,338,754	+	metL	Shewana3_3613	0.15	-0.3
4,338,754	+	metL	Shewana3_3613	0.15	+0.7
4,338,754	+	metL	Shewana3_3613	0.15	-0.1
4,338,754	+	metL	Shewana3_3613	0.15	-0.3
4,338,754	+	metL	Shewana3_3613	0.15	-0.3
4,338,762	-	metL	Shewana3_3613	0.15	-0.0
4,338,762	-	metL	Shewana3_3613	0.15	-0.2
4,338,762	-	metL	Shewana3_3613	0.15	-0.2
4,338,762	-	metL	Shewana3_3613	0.15	-0.1
4,338,808	-	metL	Shewana3_3613	0.17	-0.1
4,338,885	-	metL	Shewana3_3613	0.20	-0.0
4,338,885	-	metL	Shewana3_3613	0.20	-0.4