Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2759
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
3,294,563 | + | Shewana3_2758 | 0.89 | +0.5 | |
3,294,583 | + | Shewana3_2758 | 0.89 | +0.3 | |
3,294,654 | - | -0.5 | |||
3,294,756 | - | -0.6 | |||
3,294,805 | + | +1.0 | |||
3,294,838 | - | +0.5 | |||
3,294,924 | - | +0.1 | |||
3,295,030 | + | +0.5 | |||
3,295,065 | + | +0.5 | |||
3,295,402 | - | Shewana3_2759 | 0.40 | -1.1 | |
3,295,485 | - | Shewana3_2759 | 0.49 | -1.1 | |
3,295,553 | + | Shewana3_2759 | 0.57 | +1.0 | |
3,295,589 | + | Shewana3_2759 | 0.61 | +0.5 | |
3,295,789 | + | Shewana3_2759 | 0.83 | +2.7 | |
3,295,858 | - | -1.1 | |||
3,295,889 | + | -0.0 | |||
3,295,892 | - | +0.5 | |||
3,296,005 | - | -1.8 | |||
3,296,005 | - | +0.5 | |||
3,296,923 | + | Shewana3_2760 | 0.52 | +0.5 |
Or see this region's nucleotide sequence