Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1962
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,334,632 | + | Shewana3_1960 | 0.61 | -0.5 | |
2,334,952 | - | Shewana3_1960 | 0.89 | +1.5 | |
2,335,024 | + | +0.5 | |||
2,335,558 | + | Shewana3_1962 | 0.57 | +0.8 | |
2,335,845 | - | +0.6 | |||
2,335,938 | - | ansA | Shewana3_1963 | 0.19 | +0.5 |
2,336,041 | - | ansA | Shewana3_1963 | 0.29 | -0.4 |
2,336,150 | - | ansA | Shewana3_1963 | 0.40 | -0.5 |
2,336,215 | + | ansA | Shewana3_1963 | 0.46 | +0.5 |
2,336,463 | + | +0.5 | |||
2,336,541 | - | ansA | Shewana3_1963 | 0.78 | +2.5 |
Or see this region's nucleotide sequence