Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0272 and Shewana3_0273 are separated by 303 nucleotides Shewana3_0273 and moaA are separated by 340 nucleotides
Shewana3_0272: Shewana3_0272 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 305,555 to 307,471
_0272
Shewana3_0273: Shewana3_0273 - electron transfer flavoprotein-ubiquinone oxidoreductase (RefSeq), at 307,775 to 309,424
_0273
Shewana3_0274: moaA - molybdenum cofactor biosynthesis protein A (RefSeq), at 309,765 to 310,778
moaA
Position (kb) 307
308
309
310 Strain fitness (log2 ratio) -2
-1
0
1 at 307.323 kb on - strand at 307.333 kb on - strand at 307.351 kb on + strand at 307.592 kb on - strand at 307.798 kb on - strand at 307.893 kb on + strand at 307.941 kb on + strand, within Shewana3_0273 at 307.975 kb on + strand, within Shewana3_0273 at 308.022 kb on - strand, within Shewana3_0273 at 308.066 kb on - strand, within Shewana3_0273 at 308.121 kb on + strand, within Shewana3_0273 at 308.377 kb on - strand, within Shewana3_0273 at 308.401 kb on - strand, within Shewana3_0273 at 308.412 kb on + strand, within Shewana3_0273 at 308.510 kb on - strand, within Shewana3_0273 at 308.555 kb on - strand, within Shewana3_0273 at 308.730 kb on + strand, within Shewana3_0273 at 308.730 kb on + strand, within Shewana3_0273 at 308.730 kb on + strand, within Shewana3_0273 at 308.730 kb on + strand, within Shewana3_0273 at 308.730 kb on + strand, within Shewana3_0273 at 308.738 kb on - strand, within Shewana3_0273 at 308.738 kb on - strand, within Shewana3_0273 at 308.738 kb on - strand, within Shewana3_0273 at 308.738 kb on - strand, within Shewana3_0273 at 308.738 kb on - strand, within Shewana3_0273 at 308.738 kb on - strand, within Shewana3_0273 at 308.738 kb on - strand, within Shewana3_0273 at 308.901 kb on - strand, within Shewana3_0273 at 309.045 kb on - strand, within Shewana3_0273 at 309.060 kb on + strand, within Shewana3_0273 at 309.317 kb on + strand at 309.362 kb on + strand at 309.512 kb on - strand at 309.539 kb on - strand at 309.540 kb on + strand at 309.597 kb on - strand at 309.610 kb on + strand at 309.642 kb on + strand at 309.733 kb on - strand at 309.880 kb on + strand, within moaA at 309.898 kb on - strand, within moaA at 310.014 kb on - strand, within moaA at 310.024 kb on - strand, within moaA at 310.109 kb on - strand, within moaA at 310.121 kb on - strand, within moaA at 310.134 kb on + strand, within moaA at 310.134 kb on + strand, within moaA at 310.134 kb on + strand, within moaA at 310.134 kb on + strand, within moaA at 310.142 kb on - strand, within moaA at 310.158 kb on + strand, within moaA at 310.218 kb on + strand, within moaA at 310.402 kb on - strand, within moaA
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 307,323 - -0.2 307,333 - +0.0 307,351 + -0.4 307,592 - -0.5 307,798 - -0.1 307,893 + -0.2 307,941 + Shewana3_0273 0.10 -1.2 307,975 + Shewana3_0273 0.12 -0.1 308,022 - Shewana3_0273 0.15 -0.2 308,066 - Shewana3_0273 0.18 -0.2 308,121 + Shewana3_0273 0.21 -0.1 308,377 - Shewana3_0273 0.36 +0.1 308,401 - Shewana3_0273 0.38 -0.0 308,412 + Shewana3_0273 0.39 -0.4 308,510 - Shewana3_0273 0.45 -0.1 308,555 - Shewana3_0273 0.47 +0.1 308,730 + Shewana3_0273 0.58 -0.1 308,730 + Shewana3_0273 0.58 +0.0 308,730 + Shewana3_0273 0.58 -0.8 308,730 + Shewana3_0273 0.58 -0.3 308,730 + Shewana3_0273 0.58 -0.1 308,738 - Shewana3_0273 0.58 -0.1 308,738 - Shewana3_0273 0.58 -0.1 308,738 - Shewana3_0273 0.58 -0.8 308,738 - Shewana3_0273 0.58 -0.3 308,738 - Shewana3_0273 0.58 -0.0 308,738 - Shewana3_0273 0.58 -0.8 308,738 - Shewana3_0273 0.58 -0.8 308,901 - Shewana3_0273 0.68 -1.8 309,045 - Shewana3_0273 0.77 -0.2 309,060 + Shewana3_0273 0.78 +0.3 309,317 + -0.2 309,362 + -0.4 309,512 - +0.2 309,539 - -0.1 309,540 + -0.1 309,597 - -0.4 309,610 + -0.1 309,642 + +0.0 309,733 - -0.1 309,880 + moaA Shewana3_0274 0.11 +0.0 309,898 - moaA Shewana3_0274 0.13 +0.1 310,014 - moaA Shewana3_0274 0.25 +1.2 310,024 - moaA Shewana3_0274 0.26 -0.2 310,109 - moaA Shewana3_0274 0.34 -0.7 310,121 - moaA Shewana3_0274 0.35 +0.2 310,134 + moaA Shewana3_0274 0.36 +0.3 310,134 + moaA Shewana3_0274 0.36 +0.2 310,134 + moaA Shewana3_0274 0.36 +0.2 310,134 + moaA Shewana3_0274 0.36 +0.0 310,142 - moaA Shewana3_0274 0.37 -0.4 310,158 + moaA Shewana3_0274 0.39 +0.0 310,218 + moaA Shewana3_0274 0.45 -0.0 310,402 - moaA Shewana3_0274 0.63 +0.1
Or see this region's nucleotide sequence