Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2498

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
2,577,482	+	livJ	Synpcc7942_2496	0.66	-1.3
2,577,611	+	livJ	Synpcc7942_2496	0.77	+1.6
2,577,619	-	livJ	Synpcc7942_2496	0.78	+0.2
2,577,619	-	livJ	Synpcc7942_2496	0.78	-1.0
2,577,632	-	livJ	Synpcc7942_2496	0.79	-1.4
2,577,668	-	livJ	Synpcc7942_2496	0.82	-1.3
2,577,670	+	livJ	Synpcc7942_2496	0.82	+0.0
2,577,688	-	livJ	Synpcc7942_2496	0.83	-3.3
2,577,701	+	livJ	Synpcc7942_2496	0.84	-0.3
2,577,717	-	livJ	Synpcc7942_2496	0.86	+0.0
2,577,722	-	livJ	Synpcc7942_2496	0.86	+0.5
2,577,755	+	livJ	Synpcc7942_2496	0.89	-0.5
2,577,763	-	livJ	Synpcc7942_2496	0.90	+1.0
2,577,763	-	livJ	Synpcc7942_2496	0.90	-1.8
2,577,769	-				+1.9
2,577,791	+				+0.9
2,577,829	-				-0.5
2,577,834	-				-0.3
2,577,835	+				-0.5
2,577,835	+				-1.8
2,577,843	-				+3.0
2,577,848	+				-0.8
2,577,856	-				+2.4
2,577,858	+				+3.2
2,577,889	-				-0.8
2,577,907	-				-0.5
2,578,369	+				+2.3
2,578,369	+				-3.1
2,578,369	+				-0.5
2,578,369	+				-0.1
2,578,381	+				-1.3
2,578,382	-				+1.0
2,578,397	+				+2.6
2,578,405	-				-2.0
2,578,419	-				-3.0
2,578,438	+				-0.5
2,578,449	+				-0.1
2,578,467	-				-1.3
2,578,468	+				-2.0
2,578,468	+				-2.0
2,578,477	-				-1.1
2,578,477	-				-2.3
2,578,477	-				+0.4
2,578,495	+				-1.3
2,578,579	+				-1.0
2,578,579	+				+2.0
2,578,587	-				+0.0
2,578,601	+		Synpcc7942_2498	0.10	-1.8
2,578,621	+		Synpcc7942_2498	0.12	-2.9
2,578,631	+		Synpcc7942_2498	0.13	-1.3
2,578,631	+		Synpcc7942_2498	0.13	-0.5
2,578,639	-		Synpcc7942_2498	0.13	-0.5
2,578,682	-		Synpcc7942_2498	0.17	-4.2
2,578,712	+		Synpcc7942_2498	0.19	+4.0
2,578,777	+		Synpcc7942_2498	0.25	+0.5
2,578,801	+		Synpcc7942_2498	0.27	-0.5
2,578,811	+		Synpcc7942_2498	0.27	-0.5
2,578,815	+		Synpcc7942_2498	0.28	-3.4
2,578,833	-		Synpcc7942_2498	0.29	-0.0
2,578,834	+		Synpcc7942_2498	0.29	+0.0
2,578,835	+		Synpcc7942_2498	0.29	-1.0
2,578,870	+		Synpcc7942_2498	0.32	-1.0
2,578,878	-		Synpcc7942_2498	0.33	-2.1
2,578,883	-		Synpcc7942_2498	0.33	-1.3
2,578,890	-		Synpcc7942_2498	0.34	-2.0
2,578,954	+		Synpcc7942_2498	0.39	-1.3
2,578,982	+		Synpcc7942_2498	0.41	-2.4
2,578,993	+		Synpcc7942_2498	0.42	+2.4
2,579,015	+		Synpcc7942_2498	0.44	+4.1
2,579,015	+		Synpcc7942_2498	0.44	-0.5
2,579,023	-		Synpcc7942_2498	0.44	-3.0
2,579,098	-		Synpcc7942_2498	0.50	+1.8
2,579,106	+		Synpcc7942_2498	0.51	+0.0
2,579,133	-		Synpcc7942_2498	0.53	+0.5
2,579,159	+		Synpcc7942_2498	0.55	+2.0
2,579,164	+		Synpcc7942_2498	0.56	-2.7
2,579,164	+		Synpcc7942_2498	0.56	-0.5
2,579,164	+		Synpcc7942_2498	0.56	-0.2
2,579,172	-		Synpcc7942_2498	0.56	+3.5
2,579,195	-		Synpcc7942_2498	0.58	+0.0
2,579,196	-		Synpcc7942_2498	0.58	-1.4
2,579,202	+		Synpcc7942_2498	0.59	-1.0
2,579,210	-		Synpcc7942_2498	0.59	-0.8
2,579,210	-		Synpcc7942_2498	0.59	-0.5
2,579,213	+		Synpcc7942_2498	0.60	+1.0
2,579,232	+		Synpcc7942_2498	0.61	+2.0
2,579,233	+		Synpcc7942_2498	0.61	-1.5
2,579,258	+		Synpcc7942_2498	0.63	-1.8
2,579,258	+		Synpcc7942_2498	0.63	+1.0
2,579,266	-		Synpcc7942_2498	0.64	-1.5
2,579,274	+		Synpcc7942_2498	0.64	-1.3
2,579,276	-		Synpcc7942_2498	0.65	-0.1
2,579,282	-		Synpcc7942_2498	0.65	+3.3
2,579,284	+		Synpcc7942_2498	0.65	-2.4
2,579,284	+		Synpcc7942_2498	0.65	+0.8
2,579,284	+		Synpcc7942_2498	0.65	+1.4
2,579,292	-		Synpcc7942_2498	0.66	+1.4
2,579,292	-		Synpcc7942_2498	0.66	-0.8
2,579,319	+		Synpcc7942_2498	0.68	-1.0
2,579,339	+		Synpcc7942_2498	0.70	-1.3
2,579,427	-		Synpcc7942_2498	0.77	+0.0
2,579,433	+		Synpcc7942_2498	0.77	+1.0
2,579,433	+		Synpcc7942_2498	0.77	+2.2
2,579,449	+		Synpcc7942_2498	0.79	-2.0
2,579,464	-		Synpcc7942_2498	0.80	+0.0
2,579,472	+		Synpcc7942_2498	0.80	-0.5
2,579,472	+		Synpcc7942_2498	0.80	+0.0
2,579,488	+		Synpcc7942_2498	0.82	-1.8
2,579,496	-		Synpcc7942_2498	0.82	+0.0
2,579,503	-		Synpcc7942_2498	0.83	-1.4
2,579,515	+		Synpcc7942_2498	0.84	+1.0
2,579,518	-		Synpcc7942_2498	0.84	+1.0
2,579,534	-		Synpcc7942_2498	0.85	-0.4
2,579,571	+		Synpcc7942_2498	0.88	+3.2
2,579,582	-		Synpcc7942_2498	0.89	-1.8
2,579,582	-		Synpcc7942_2498	0.89	-2.3
2,579,627	-				+1.0
2,579,632	+				+3.2
2,579,638	-				+0.2
2,579,638	-				+0.0
2,579,639	+				-1.8
2,579,644	+				-2.0
2,579,649	+				-1.3
2,579,649	+				-1.5
2,579,649	+				-1.0
2,579,649	+				+1.5
2,579,657	-				+1.4
2,579,657	-				+1.0
2,579,677	+				-0.1
2,579,685	-				-1.0
2,579,685	-				+1.1
2,579,713	+				+2.9
2,579,721	-				-1.0
2,579,754	-				+1.5
2,579,774	+				-1.5
2,579,774	+				-0.1
2,579,774	+				-2.5
2,579,777	-				+2.6
2,579,782	-				+1.9
2,579,782	-				-1.5
2,579,782	-				-1.3
2,579,793	-				-1.3
2,579,801	-				-2.1
2,579,829	+				-1.3
2,579,829	+				-0.3
2,579,829	+				+1.7
2,579,829	+				-0.5
2,579,829	+				-2.1
2,579,835	+				+1.8
2,579,835	+				+0.2
2,579,835	+				+3.6
2,579,835	+				+1.0
2,579,835	+				-0.5
2,579,837	-				+3.9
2,579,837	-				-1.3
2,579,837	-				+1.0
2,579,848	-				-2.1
2,579,861	+		Synpcc7942_2499	0.11	-2.2
2,579,885	-		Synpcc7942_2499	0.13	+0.3
2,579,924	+		Synpcc7942_2499	0.16	-0.5
2,579,935	-		Synpcc7942_2499	0.16	+0.5
2,579,962	+		Synpcc7942_2499	0.18	+4.0
2,579,994	-		Synpcc7942_2499	0.21	-3.5
2,580,055	+		Synpcc7942_2499	0.25	+2.8
2,580,055	+		Synpcc7942_2499	0.25	+2.4
2,580,074	-		Synpcc7942_2499	0.27	-1.7
2,580,074	-		Synpcc7942_2499	0.27	-2.1
2,580,074	-		Synpcc7942_2499	0.27	+0.5
2,580,081	-		Synpcc7942_2499	0.27	+2.0
2,580,082	+		Synpcc7942_2499	0.27	-1.0
2,580,082	+		Synpcc7942_2499	0.27	-0.5
2,580,090	-		Synpcc7942_2499	0.28	+1.0
2,580,146	+		Synpcc7942_2499	0.32	-1.3
2,580,187	-		Synpcc7942_2499	0.35	+1.0
2,580,192	-		Synpcc7942_2499	0.36	+2.0
2,580,212	-		Synpcc7942_2499	0.37	-0.5
2,580,247	-		Synpcc7942_2499	0.40	+0.7
2,580,271	+		Synpcc7942_2499	0.41	-2.7
2,580,286	+		Synpcc7942_2499	0.43	-1.0
2,580,294	-				+1.0
2,580,305	-		Synpcc7942_2499	0.44	-0.5
2,580,305	-		Synpcc7942_2499	0.44	+0.0
2,580,318	-		Synpcc7942_2499	0.45	+0.0
2,580,329	+		Synpcc7942_2499	0.46	-1.0
2,580,330	+		Synpcc7942_2499	0.46	-1.0
2,580,330	+		Synpcc7942_2499	0.46	-0.5
2,580,345	-		Synpcc7942_2499	0.47	-1.5
2,580,345	-		Synpcc7942_2499	0.47	-1.8
2,580,361	-		Synpcc7942_2499	0.48	+0.0
2,580,364	-		Synpcc7942_2499	0.48	-2.0
2,580,369	+		Synpcc7942_2499	0.49	-2.0
2,580,372	-		Synpcc7942_2499	0.49	-1.9
2,580,377	-		Synpcc7942_2499	0.49	-2.4
2,580,523	-		Synpcc7942_2499	0.60	+1.2
2,580,528	-		Synpcc7942_2499	0.61	-0.2
2,580,528	-		Synpcc7942_2499	0.61	-0.4
2,580,530	+		Synpcc7942_2499	0.61	-1.3
2,580,530	+		Synpcc7942_2499	0.61	+0.5
2,580,538	-		Synpcc7942_2499	0.61	-3.9
2,580,538	-		Synpcc7942_2499	0.61	-2.0
2,580,538	-		Synpcc7942_2499	0.61	-1.0
2,580,556	-		Synpcc7942_2499	0.63	-2.3
2,580,569	+		Synpcc7942_2499	0.64	+2.4
2,580,577	-		Synpcc7942_2499	0.64	+0.0
2,580,580	-		Synpcc7942_2499	0.65	+1.0
2,580,602	-		Synpcc7942_2499	0.66	-0.5
2,580,714	-		Synpcc7942_2499	0.74	+1.0