Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2479

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
2,559,406	+				+0.0
2,559,406	+				-2.0
2,559,414	-				-1.3
2,559,414	-				-2.0
2,559,415	-				-1.3
2,559,420	+				-2.0
2,559,428	-				-1.5
2,559,435	+				-2.0
2,559,487	-				+1.0
2,559,487	-				-0.5
2,559,505	-				-1.5
2,559,580	+	psb28-2	Synpcc7942_2478	0.21	-1.0
2,559,614	+	psb28-2	Synpcc7942_2478	0.30	-1.5
2,559,614	+	psb28-2	Synpcc7942_2478	0.30	-1.0
2,559,614	+	psb28-2	Synpcc7942_2478	0.30	+1.0
2,559,614	+	psb28-2	Synpcc7942_2478	0.30	+0.9
2,559,622	-	psb28-2	Synpcc7942_2478	0.33	-2.9
2,559,649	+	psb28-2	Synpcc7942_2478	0.40	-2.0
2,559,649	+	psb28-2	Synpcc7942_2478	0.40	+3.2
2,559,657	-	psb28-2	Synpcc7942_2478	0.42	-1.8
2,559,668	+	psb28-2	Synpcc7942_2478	0.45	+1.5
2,559,697	+	psb28-2	Synpcc7942_2478	0.53	+0.0
2,559,737	-	psb28-2	Synpcc7942_2478	0.63	+1.0
2,559,754	+	psb28-2	Synpcc7942_2478	0.68	-2.4
2,559,767	+	psb28-2	Synpcc7942_2478	0.71	+0.9
2,559,767	+	psb28-2	Synpcc7942_2478	0.71	-1.1
2,559,767	+	psb28-2	Synpcc7942_2478	0.71	+0.0
2,559,780	-	psb28-2	Synpcc7942_2478	0.75	-0.8
2,559,815	-	psb28-2	Synpcc7942_2478	0.84	-1.8
2,559,836	+	psb28-2	Synpcc7942_2478	0.90	-2.0
2,559,852	+				+2.8
2,559,852	+				+1.0
2,559,860	-				+1.0
2,559,882	+				+1.6
2,559,890	-				+3.7
2,559,898	+				+1.0
2,559,898	+				+1.0
2,559,900	-				+0.9
2,560,027	+				-1.0
2,560,027	+				-1.8
2,560,033	-				-1.1
2,560,107	-				-0.5
2,560,119	+				-1.5
2,560,127	-				-0.5
2,560,127	-				-1.7
2,560,196	-				-2.3
2,560,306	-				-1.5
2,560,322	+				-1.8
2,560,325	-				-1.5
2,560,353	+				-0.3
2,560,417	-				-2.0
2,560,435	+				+1.0
2,560,443	-		Synpcc7942_2479	0.12	-2.1
2,560,527	+		Synpcc7942_2479	0.27	-0.4
2,560,527	+		Synpcc7942_2479	0.27	+0.0
2,560,533	-		Synpcc7942_2479	0.28	-2.3
2,560,579	+		Synpcc7942_2479	0.36	-0.1
2,560,582	-		Synpcc7942_2479	0.37	-2.3
2,560,662	-		Synpcc7942_2479	0.51	-2.5
2,560,671	+		Synpcc7942_2479	0.52	-2.3
2,560,711	+		Synpcc7942_2479	0.59	-0.8
2,560,721	+		Synpcc7942_2479	0.61	-1.8
2,560,729	-		Synpcc7942_2479	0.62	-2.1
2,560,786	-		Synpcc7942_2479	0.72	-4.2
2,560,855	+		Synpcc7942_2479	0.85	+0.9
2,560,882	+		Synpcc7942_2479	0.89	+0.8
2,560,890	-				-3.2
2,560,891	-				-2.7
2,560,891	-				-1.3
2,560,901	-				+1.4
2,560,901	-				+0.3
2,560,907	-				-3.2
2,560,978	+				-2.8
2,561,047	-		Synpcc7942_2480	0.11	-2.1
2,561,062	+		Synpcc7942_2480	0.13	-0.1
2,561,139	-		Synpcc7942_2480	0.21	-1.3
2,561,222	-		Synpcc7942_2480	0.31	-2.5
2,561,437	-		Synpcc7942_2480	0.54	-1.0
2,561,696	+		Synpcc7942_2480	0.83	-0.4
2,561,940	+				-1.0