Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2180

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
2,258,511	+				+1.2
2,258,522	+				-1.4
2,258,522	+				+1.7
2,258,537	-		Synpcc7942_2179	0.10	-0.8
2,258,538	-		Synpcc7942_2179	0.10	+0.2
2,258,579	+		Synpcc7942_2179	0.15	-0.4
2,258,599	-		Synpcc7942_2179	0.17	+2.8
2,258,601	+		Synpcc7942_2179	0.17	+3.5
2,258,623	+		Synpcc7942_2179	0.19	-2.0
2,258,631	-		Synpcc7942_2179	0.20	+1.5
2,258,638	-		Synpcc7942_2179	0.21	-1.5
2,258,657	+		Synpcc7942_2179	0.23	+0.2
2,258,705	+		Synpcc7942_2179	0.28	+1.1
2,258,744	-		Synpcc7942_2179	0.33	-0.8
2,258,793	-		Synpcc7942_2179	0.38	+0.9
2,258,793	-		Synpcc7942_2179	0.38	-2.5
2,258,874	+		Synpcc7942_2179	0.47	-0.6
2,258,874	+		Synpcc7942_2179	0.47	-2.0
2,258,874	+		Synpcc7942_2179	0.47	-0.4
2,258,874	+		Synpcc7942_2179	0.47	-2.1
2,258,882	-		Synpcc7942_2179	0.48	-0.0
2,258,882	-		Synpcc7942_2179	0.48	-0.4
2,258,882	-		Synpcc7942_2179	0.48	-2.5
2,258,884	+		Synpcc7942_2179	0.48	-1.1
2,258,887	-		Synpcc7942_2179	0.48	+1.4
2,258,892	-		Synpcc7942_2179	0.49	+1.2
2,258,892	-		Synpcc7942_2179	0.49	+0.8
2,258,907	+		Synpcc7942_2179	0.50	-0.4
2,258,908	+		Synpcc7942_2179	0.51	-1.6
2,258,908	+		Synpcc7942_2179	0.51	-2.1
2,258,915	-		Synpcc7942_2179	0.51	+1.2
2,258,916	-		Synpcc7942_2179	0.51	+1.2
2,258,968	+		Synpcc7942_2179	0.57	+1.9
2,258,982	-		Synpcc7942_2179	0.59	-1.4
2,258,997	+		Synpcc7942_2179	0.60	+0.6
2,259,005	-		Synpcc7942_2179	0.61	+0.2
2,259,009	+		Synpcc7942_2179	0.62	-2.5
2,259,009	+		Synpcc7942_2179	0.62	-0.8
2,259,009	+		Synpcc7942_2179	0.62	+2.8
2,259,036	-		Synpcc7942_2179	0.65	+2.0
2,259,036	-		Synpcc7942_2179	0.65	+0.2
2,259,057	-		Synpcc7942_2179	0.67	-2.4
2,259,060	+		Synpcc7942_2179	0.67	+4.0
2,259,063	-		Synpcc7942_2179	0.68	+3.5
2,259,125	+		Synpcc7942_2179	0.74	+1.2
2,259,127	-		Synpcc7942_2179	0.75	+2.2
2,259,128	-		Synpcc7942_2179	0.75	-2.5
2,259,128	-		Synpcc7942_2179	0.75	+3.2
2,259,128	-		Synpcc7942_2179	0.75	-1.4
2,259,128	-		Synpcc7942_2179	0.75	+0.2
2,259,141	-		Synpcc7942_2179	0.76	+0.5
2,259,151	-		Synpcc7942_2179	0.77	+0.2
2,259,188	+		Synpcc7942_2179	0.81	+2.6
2,259,193	+		Synpcc7942_2179	0.82	-2.9
2,259,226	+		Synpcc7942_2179	0.85	+0.1
2,259,231	+				+0.2
2,259,285	-				-1.4
2,259,287	+				-0.1
2,259,287	+				+1.2
2,259,287	+				+1.2
2,259,287	+				+0.5
2,259,287	+				-3.2
2,259,295	-				-3.5
2,259,295	-				+0.3
2,259,295	-				-0.4
2,259,295	-				+1.3
2,259,326	+				+3.4
2,259,336	+				+1.0
2,259,339	-				+1.5
2,259,344	-				-1.8
2,259,363	+				-4.1
2,259,400	-				+1.9
2,259,424	-				-0.0
2,259,436	-				+0.2
2,259,451	+				+0.5
2,259,468	-				+3.9
2,259,475	+				-1.1
2,259,475	+				+1.9
2,259,503	-				-1.6
2,259,544	+	prxQ-A1	Synpcc7942_2180	0.12	-0.2
2,259,544	+	prxQ-A1	Synpcc7942_2180	0.12	+3.0
2,259,544	+	prxQ-A1	Synpcc7942_2180	0.12	+1.8
2,259,588	-	prxQ-A1	Synpcc7942_2180	0.22	+3.5
2,259,604	+	prxQ-A1	Synpcc7942_2180	0.26	+1.9
2,259,618	-	prxQ-A1	Synpcc7942_2180	0.29	+1.7
2,259,620	+	prxQ-A1	Synpcc7942_2180	0.30	+0.7
2,259,626	+	prxQ-A1	Synpcc7942_2180	0.31	+2.7
2,259,628	-	prxQ-A1	Synpcc7942_2180	0.32	-0.1
2,259,628	-	prxQ-A1	Synpcc7942_2180	0.32	+6.4
2,259,719	-	prxQ-A1	Synpcc7942_2180	0.52	+1.2
2,259,733	+	prxQ-A1	Synpcc7942_2180	0.55	+3.1
2,259,739	+	prxQ-A1	Synpcc7942_2180	0.57	+1.2
2,259,739	+	prxQ-A1	Synpcc7942_2180	0.57	-1.5
2,259,739	+	prxQ-A1	Synpcc7942_2180	0.57	+4.3
2,259,784	-	prxQ-A1	Synpcc7942_2180	0.67	+2.6
2,259,795	+	prxQ-A1	Synpcc7942_2180	0.70	+3.2
2,259,795	+	prxQ-A1	Synpcc7942_2180	0.70	+1.0
2,259,795	+	prxQ-A1	Synpcc7942_2180	0.70	+2.9
2,259,828	-	prxQ-A1	Synpcc7942_2180	0.77	+1.4
2,259,873	-	prxQ-A1	Synpcc7942_2180	0.87	+2.0
2,259,873	-	prxQ-A1	Synpcc7942_2180	0.87	+3.2
2,259,873	-	prxQ-A1	Synpcc7942_2180	0.87	-1.8
2,259,903	+				+2.5
2,259,917	+				+0.2
2,259,917	+				+2.2
2,259,953	+				+1.4
2,259,963	-				+0.8
2,259,972	-				+0.7
2,259,986	+				-1.8
2,259,994	-				-2.0
2,259,994	-				-1.4
2,260,043	+				-0.8
2,260,108	-		Synpcc7942_2181	0.11	+1.2
2,260,151	+		Synpcc7942_2181	0.14	+0.6
2,260,209	+		Synpcc7942_2181	0.19	-0.4
2,260,217	-		Synpcc7942_2181	0.20	-0.4
2,260,257	-		Synpcc7942_2181	0.23	+0.4
2,260,410	-		Synpcc7942_2181	0.35	-0.8
2,260,426	+		Synpcc7942_2181	0.37	-2.1
2,260,488	-		Synpcc7942_2181	0.42	-1.1
2,260,546	+		Synpcc7942_2181	0.47	+0.2
2,260,624	+		Synpcc7942_2181	0.53	-0.8
2,260,646	-		Synpcc7942_2181	0.55	+1.2
2,260,648	-		Synpcc7942_2181	0.55	-1.1
2,260,674	+		Synpcc7942_2181	0.57	+1.2
2,260,696	+		Synpcc7942_2181	0.59	+0.2
2,260,696	+		Synpcc7942_2181	0.59	+1.2
2,260,796	-		Synpcc7942_2181	0.67	-1.1
2,260,827	+		Synpcc7942_2181	0.70	-1.0
2,260,845	-		Synpcc7942_2181	0.71	-1.8