Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2109

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
2,188,177	+	cynA	Synpcc7942_2107	0.83	-0.4
2,188,196	+	cynA	Synpcc7942_2107	0.84	+0.7
2,188,234	+	cynA	Synpcc7942_2107	0.86	+0.2
2,188,260	-	cynA	Synpcc7942_2107	0.88	+2.4
2,188,325	+				-0.6
2,188,340	-				-1.4
2,188,369	+				+0.2
2,188,416	-				+1.2
2,188,426	-				+2.8
2,188,426	-				+2.9
2,188,426	-				-0.7
2,188,438	-				+0.8
2,188,439	+				+2.7
2,188,480	+				+5.3
2,188,487	+				-1.6
2,188,494	-				-3.3
2,188,576	-				-0.8
2,188,585	-				-0.1
2,188,591	+				-2.4
2,188,591	+				-0.5
2,188,591	+				-0.6
2,188,591	+				-0.8
2,188,591	+				+0.6
2,188,591	+				-0.4
2,188,591	+				+1.2
2,188,591	+				+1.4
2,188,591	+				+0.6
2,188,591	+				-2.1
2,188,599	-				+1.2
2,188,599	-				+2.2
2,188,599	-				+2.0
2,188,599	-				+3.2
2,188,599	-				+0.4
2,188,599	-				-1.0
2,188,599	-				-0.3
2,188,599	-				-0.2
2,188,599	-				-2.4
2,188,599	-				-0.4
2,188,599	-				+3.6
2,188,654	-				-1.2
2,188,697	+				-1.2
2,188,703	-				+2.2
2,188,720	-				+0.2
2,188,783	-		Synpcc7942_2108	0.18	-1.4
2,188,788	+		Synpcc7942_2108	0.19	-0.1
2,188,800	+		Synpcc7942_2108	0.22	-1.2
2,188,800	+		Synpcc7942_2108	0.22	+3.1
2,188,800	+		Synpcc7942_2108	0.22	+2.5
2,188,808	-		Synpcc7942_2108	0.24	-3.3
2,188,854	+		Synpcc7942_2108	0.37	-2.0
2,188,854	+		Synpcc7942_2108	0.37	-1.2
2,188,943	+		Synpcc7942_2108	0.61	-1.4
2,188,943	+		Synpcc7942_2108	0.61	-3.0
2,188,951	-		Synpcc7942_2108	0.63	+1.2
2,188,951	-		Synpcc7942_2108	0.63	-0.8
2,188,951	-		Synpcc7942_2108	0.63	+0.6
2,188,951	-		Synpcc7942_2108	0.63	-0.4
2,188,956	-		Synpcc7942_2108	0.64	+1.2
2,188,961	-		Synpcc7942_2108	0.66	-2.0
2,188,968	+		Synpcc7942_2108	0.68	+0.8
2,188,969	+		Synpcc7942_2108	0.68	+1.2
2,188,975	+		Synpcc7942_2108	0.70	+2.2
2,188,983	+		Synpcc7942_2108	0.72	-1.3
2,188,985	+		Synpcc7942_2108	0.72	+1.0
2,188,985	+		Synpcc7942_2108	0.72	+0.2
2,188,997	+		Synpcc7942_2108	0.76	-3.0
2,189,005	-		Synpcc7942_2108	0.78	+1.2
2,189,046	+		Synpcc7942_2108	0.89	-0.8
2,189,046	+		Synpcc7942_2108	0.89	-1.2
2,189,046	+		Synpcc7942_2108	0.89	+1.7
2,189,048	-		Synpcc7942_2108	0.89	-0.4
2,189,054	-				+4.1
2,189,054	-				+0.2
2,189,054	-				+1.2
2,189,056	+				-1.6
2,189,064	-				-0.4
2,189,064	-				+1.2
2,189,079	-				-1.2
2,189,081	+				-1.8
2,189,081	+				-1.2
2,189,088	+				-1.6
2,189,089	-				+2.6
2,189,107	-				+2.4
2,189,114	+				-1.2
2,189,122	-				+2.4
2,189,144	+				+1.2
2,189,148	+				+2.1
2,189,152	-				-1.6
2,189,161	+				+0.3
2,189,202	-				-2.3
2,189,222	-				+4.1
2,189,238	+				+1.7
2,189,238	+				-1.6
2,189,240	-				-1.2
2,189,272	+				+2.3
2,189,272	+				+0.2
2,189,285	-				+2.3
2,189,313	-				+0.9
2,189,356	+		Synpcc7942_2109	0.12	+0.7
2,189,361	+		Synpcc7942_2109	0.12	+1.2
2,189,361	+		Synpcc7942_2109	0.12	+0.3
2,189,379	+		Synpcc7942_2109	0.13	+2.7
2,189,398	+		Synpcc7942_2109	0.14	+0.6
2,189,398	+		Synpcc7942_2109	0.14	+4.7
2,189,398	+		Synpcc7942_2109	0.14	+1.2
2,189,406	-		Synpcc7942_2109	0.15	+2.6
2,189,406	-		Synpcc7942_2109	0.15	-0.1
2,189,406	-		Synpcc7942_2109	0.15	+3.7
2,189,421	+		Synpcc7942_2109	0.16	+3.5
2,189,429	-		Synpcc7942_2109	0.16	+1.7
2,189,486	-		Synpcc7942_2109	0.19	-1.6
2,189,493	+		Synpcc7942_2109	0.20	-1.6
2,189,503	+		Synpcc7942_2109	0.20	+3.0
2,189,503	+		Synpcc7942_2109	0.20	+0.6
2,189,503	+		Synpcc7942_2109	0.20	+5.1
2,189,508	+		Synpcc7942_2109	0.21	+3.7
2,189,508	+		Synpcc7942_2109	0.21	-1.6
2,189,511	-		Synpcc7942_2109	0.21	+2.8
2,189,514	-		Synpcc7942_2109	0.21	+0.2
2,189,524	-		Synpcc7942_2109	0.22	-1.3
2,189,526	+		Synpcc7942_2109	0.22	+3.5
2,189,542	+				+1.2
2,189,559	-		Synpcc7942_2109	0.24	-0.8
2,189,638	+		Synpcc7942_2109	0.28	-1.2
2,189,638	-		Synpcc7942_2109	0.28	-1.2
2,189,640	+		Synpcc7942_2109	0.28	+2.2
2,189,646	+		Synpcc7942_2109	0.28	+2.3
2,189,657	-		Synpcc7942_2109	0.29	+0.2
2,189,720	-		Synpcc7942_2109	0.33	+1.7
2,189,735	-		Synpcc7942_2109	0.33	+0.6
2,189,806	-		Synpcc7942_2109	0.37	+3.0
2,189,845	+		Synpcc7942_2109	0.40	-2.0
2,189,851	-		Synpcc7942_2109	0.40	+2.1
2,190,023	-		Synpcc7942_2109	0.50	+3.1
2,190,046	-		Synpcc7942_2109	0.51	+0.2
2,190,046	-		Synpcc7942_2109	0.51	-0.4
2,190,054	+		Synpcc7942_2109	0.51	+1.4
2,190,162	+		Synpcc7942_2109	0.57	-0.1
2,190,170	-		Synpcc7942_2109	0.58	+1.6
2,190,342	-		Synpcc7942_2109	0.68	+2.2
2,190,386	-		Synpcc7942_2109	0.70	-0.4
2,190,553	+		Synpcc7942_2109	0.80	+2.7
2,190,554	+		Synpcc7942_2109	0.80	-1.7
2,190,561	+		Synpcc7942_2109	0.80	+0.2
2,190,574	-		Synpcc7942_2109	0.81	-2.7
2,190,574	-		Synpcc7942_2109	0.81	-0.6
2,190,645	+		Synpcc7942_2109	0.85	+2.7
2,190,670	+		Synpcc7942_2109	0.86	+1.3
2,190,678	-		Synpcc7942_2109	0.87	+0.9
2,190,699	+		Synpcc7942_2109	0.88	+2.4
2,190,717	-		Synpcc7942_2109	0.89	+0.2
2,190,737	+		Synpcc7942_2109	0.90	+2.4
2,190,803	+				-0.8
2,190,808	+				-1.2
2,190,811	-				-2.1
2,190,811	-				-1.4
2,190,811	-				-1.8
2,190,859	+				-1.2
2,190,859	+				-2.0
2,190,864	+				-2.2
2,190,864	+				+2.9
2,190,871	+				-1.4
2,190,871	+				-1.4
2,190,872	-				-0.2
2,190,872	-				+2.3
2,190,879	-				-1.2
2,190,879	-				-0.4
2,190,879	-				+4.1
2,190,879	-				+2.0
2,190,889	-				+1.2
2,190,889	-				+0.5
2,190,904	-				+2.2
2,191,902	+				+2.0
2,191,916	+				-1.3
2,191,916	+				+3.1
2,191,916	+				+0.2