Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2020

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
2,085,852	-				+0.1
2,085,883	+				+3.6
2,085,885	-				+0.7
2,085,899	-				+1.9
2,085,907	+				-0.3
2,085,913	-				-0.9
2,085,913	-				-1.7
2,086,026	+		Synpcc7942_2019	0.15	+0.1
2,086,026	+				+0.1
2,086,155	-		Synpcc7942_2019	0.30	+1.1
2,086,184	+		Synpcc7942_2019	0.33	+1.7
2,086,184	+		Synpcc7942_2019	0.33	-1.2
2,086,192	-		Synpcc7942_2019	0.34	-1.9
2,086,231	-		Synpcc7942_2019	0.39	+0.1
2,086,252	-		Synpcc7942_2019	0.41	-0.9
2,086,273	+		Synpcc7942_2019	0.44	+0.5
2,086,273	+		Synpcc7942_2019	0.44	+0.1
2,086,301	+		Synpcc7942_2019	0.47	-0.4
2,086,438	+		Synpcc7942_2019	0.63	-0.9
2,086,517	-		Synpcc7942_2019	0.72	-1.9
2,086,527	+		Synpcc7942_2019	0.73	-1.4
2,086,585	-		Synpcc7942_2019	0.80	-0.9
2,086,590	-		Synpcc7942_2019	0.80	-2.2
2,086,594	+		Synpcc7942_2019	0.81	-0.9
2,086,697	-				-1.7
2,086,775	+				-1.9
2,086,783	-				+1.1
2,086,840	+				-0.9
2,086,842	+				-1.3
2,086,882	-				+0.6
2,090,143	-		Synpcc7942_2021	0.19	-3.8
2,090,347	+		Synpcc7942_2021	0.88	-0.5
2,090,361	+				+2.9
2,090,361	+				+0.8
2,090,375	+				-0.9
2,090,397	+				-1.9
2,090,405	-				+0.8
2,090,424	+				-3.5
2,090,432	-				+0.9
2,090,448	+				-2.5
2,090,468	-				+0.3
2,090,478	+				-0.5
2,090,535	+	nusA	Synpcc7942_2022	0.12	-4.7
2,090,543	-	nusA	Synpcc7942_2022	0.12	-2.3