Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1679

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,746,268	-		Synpcc7942_1677	0.70	-0.6
1,746,270	+		Synpcc7942_1677	0.70	-0.6
1,746,273	-		Synpcc7942_1677	0.70	-1.8
1,746,306	+		Synpcc7942_1677	0.73	-2.5
1,746,306	+		Synpcc7942_1677	0.73	-2.2
1,746,323	-		Synpcc7942_1677	0.75	+1.0
1,746,324	+		Synpcc7942_1677	0.75	-0.6
1,746,332	-		Synpcc7942_1677	0.76	-3.1
1,746,333	-		Synpcc7942_1677	0.76	-1.0
1,746,337	-		Synpcc7942_1677	0.76	-1.5
1,746,381	+		Synpcc7942_1677	0.80	+3.1
1,746,389	-		Synpcc7942_1677	0.81	+1.7
1,746,429	+		Synpcc7942_1677	0.85	-1.0
1,746,451	+		Synpcc7942_1677	0.87	-0.0
1,746,451	+		Synpcc7942_1677	0.87	+1.0
1,746,451	+		Synpcc7942_1677	0.87	-1.6
1,746,451	+		Synpcc7942_1677	0.87	+2.8
1,746,459	-		Synpcc7942_1677	0.87	-0.9
1,746,459	-		Synpcc7942_1677	0.87	+6.1
1,746,459	-		Synpcc7942_1677	0.87	-2.5
1,746,459	-		Synpcc7942_1677	0.87	-2.2
1,746,459	-		Synpcc7942_1677	0.87	-1.6
1,746,459	-		Synpcc7942_1677	0.87	+1.0
1,746,459	-		Synpcc7942_1677	0.87	-0.0
1,746,459	-		Synpcc7942_1677	0.87	-0.3
1,746,459	-		Synpcc7942_1677	0.87	+1.0
1,746,527	+				-1.6
1,746,527	+				-2.4
1,746,535	-				-0.8
1,746,541	+				-1.9
1,746,542	-				+0.7
1,746,561	+				+1.5
1,746,575	+				+1.9
1,746,594	-				+0.4
1,746,609	+				+0.6
1,746,624	-				+1.1
1,746,624	-				-0.0
1,746,660	+				-1.3
1,746,725	+				+1.0
1,746,745	-		Synpcc7942_1678	0.25	-0.6
1,746,748	+		Synpcc7942_1678	0.25	-3.1
1,746,748	+		Synpcc7942_1678	0.25	+3.4
1,746,784	+		Synpcc7942_1678	0.32	-1.3
1,746,786	+		Synpcc7942_1678	0.32	+2.3
1,746,791	+		Synpcc7942_1678	0.33	+2.5
1,746,829	-		Synpcc7942_1678	0.40	-1.8
1,746,829	-		Synpcc7942_1678	0.40	+0.6
1,746,868	-		Synpcc7942_1678	0.47	-2.2
1,746,975	-		Synpcc7942_1678	0.67	+2.3
1,746,975	-		Synpcc7942_1678	0.67	-1.4
1,747,003	+		Synpcc7942_1678	0.72	-0.3
1,747,011	-		Synpcc7942_1678	0.74	-2.3
1,747,013	+				-0.6
1,747,016	-		Synpcc7942_1678	0.75	+1.2
1,747,021	-		Synpcc7942_1678	0.76	+2.5
1,747,064	+		Synpcc7942_1678	0.83	+1.4
1,747,083	+		Synpcc7942_1678	0.87	+2.9
1,747,083	+		Synpcc7942_1678	0.87	-1.4
1,747,083	+		Synpcc7942_1678	0.87	-1.2
1,747,083	+		Synpcc7942_1678	0.87	-1.8
1,747,083	+		Synpcc7942_1678	0.87	+1.9
1,747,089	-		Synpcc7942_1678	0.88	+3.3
1,747,091	-		Synpcc7942_1678	0.88	-0.6
1,747,103	-				-0.6
1,747,110	+				+1.0
1,747,110	+				-0.6
1,747,110	+				-2.3
1,747,116	+				+1.6
1,747,117	-				-2.5
1,747,118	-				+1.7
1,747,118	-				-0.0
1,747,119	-				-1.0
1,747,124	-				-2.0
1,747,129	-				-1.2
1,747,147	-				+0.2
1,747,147	-				-1.0
1,747,155	+				+2.0
1,747,155	+				-3.2
1,747,155	+				+4.0
1,747,155	+				+1.5
1,747,155	+				-0.8
1,747,155	+				-2.3
1,747,155	+				-1.3
1,747,155	+				+1.9
1,747,155	+				-0.3
1,747,155	+				+0.7
1,747,155	+				+2.4
1,747,155	+				-2.3
1,747,155	+				+3.4
1,747,155	+				-0.1
1,747,155	+				-1.8
1,747,155	+				-2.8
1,747,155	+				-0.6
1,747,155	+				-1.6
1,747,155	+				-1.8
1,747,160	+				+1.0
1,747,162	-				-0.6
1,747,163	-				+0.6
1,747,163	-				-2.0
1,747,163	-				+1.0
1,747,163	-				+0.4
1,747,163	-				+1.0
1,747,163	-				-1.3
1,747,163	-				+1.0
1,747,163	-				-0.6
1,747,163	-				+1.3
1,747,163	-				-1.3
1,747,163	-				-1.0
1,747,163	-				-0.6
1,747,163	-				-3.2
1,747,163	-				+1.5
1,747,163	-				-2.2
1,747,163	-				-2.0
1,747,163	-				+0.3
1,747,163	-				-0.0
1,747,163	-				+1.0
1,747,177	+				+0.3
1,747,201	-				-0.0
1,747,205	-				-2.0
1,747,209	+				-1.3
1,747,228	-				-0.0
1,747,246	+				-2.1
1,747,246	+				-2.2
1,747,317	-	psb28	Synpcc7942_1679	0.19	-1.6
1,747,330	+	psb28	Synpcc7942_1679	0.23	-1.3
1,747,330	+	psb28	Synpcc7942_1679	0.23	-0.6
1,747,356	-	psb28	Synpcc7942_1679	0.31	-4.1
1,747,363	-	psb28	Synpcc7942_1679	0.33	-1.2
1,747,363	-	psb28	Synpcc7942_1679	0.33	-2.0
1,747,365	+	psb28	Synpcc7942_1679	0.33	-2.2
1,747,365	+	psb28	Synpcc7942_1679	0.33	-2.9
1,747,373	-	psb28	Synpcc7942_1679	0.36	-3.3
1,747,373	-	psb28	Synpcc7942_1679	0.36	+1.0
1,747,374	-	psb28	Synpcc7942_1679	0.36	-2.0
1,747,390	+	psb28	Synpcc7942_1679	0.41	-0.5
1,747,413	-	psb28	Synpcc7942_1679	0.47	-1.0
1,747,414	-	psb28	Synpcc7942_1679	0.48	-2.7
1,747,576	-				-3.9
1,747,585	+				-0.6
1,747,585	+				-1.8
1,747,593	+				-0.6
1,747,593	+				+1.0
1,747,593	+				-0.0
1,747,593	-				-0.6
1,747,593	-				-0.6
1,747,593	-				-1.3
1,747,601	-				-1.8
1,747,637	-				-1.0
1,747,660	-				-0.6
1,747,668	+				-2.2
1,747,670	+				-2.8
1,747,717	-				-1.2
1,747,723	-				-1.3
1,747,723	-				+0.4
1,747,723	-				+1.5
1,747,737	+				+1.0
1,747,739	+				-1.0
1,747,739	+				+2.0
1,747,739	+				-2.3
1,747,739	+				-0.8
1,747,741	+				-1.0
1,747,745	-				-1.6
1,747,747	-				+1.7
1,747,747	-				+1.2
1,747,747	-				+2.6
1,747,747	-				+0.4
1,747,747	-				+1.0
1,747,748	+				-0.6
1,747,753	+				-0.0
1,747,756	-				-1.0
1,747,771	-				+1.8
1,747,778	-				+1.1
1,747,785	+				-1.3
1,747,831	+				+2.0
1,747,876	+				+2.2
1,747,975	-	cysA	Synpcc7942_1680	0.13	+0.6
1,748,092	+	cysA	Synpcc7942_1680	0.25	-1.3
1,748,102	+	cysA	Synpcc7942_1680	0.26	+1.0
1,748,106	-	cysA	Synpcc7942_1680	0.26	-1.1
1,748,139	+	cysA	Synpcc7942_1680	0.29	-0.0
1,748,139	+	cysA	Synpcc7942_1680	0.29	-0.4
1,748,227	+	cysA	Synpcc7942_1680	0.38	+3.9
1,748,300	-	cysA	Synpcc7942_1680	0.45	-1.0
1,748,328	-	cysA	Synpcc7942_1680	0.48	-1.3
1,748,409	-	cysA	Synpcc7942_1680	0.56	+1.0
1,748,427	+	cysA	Synpcc7942_1680	0.58	-0.3
1,748,556	-	cysA	Synpcc7942_1680	0.70	-2.5
1,748,558	+				+1.0
1,748,567	-	cysA	Synpcc7942_1680	0.71	-1.8
1,748,588	+	cysA	Synpcc7942_1680	0.73	-0.0
1,748,590	+	cysA	Synpcc7942_1680	0.74	-0.6