Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1645

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,712,352	+		Synpcc7942_1644	0.42	-1.8
1,712,357	+		Synpcc7942_1644	0.43	+0.1
1,712,360	-		Synpcc7942_1644	0.43	+1.1
1,712,388	+		Synpcc7942_1644	0.47	-1.4
1,712,404	+				+0.1
1,712,426	-		Synpcc7942_1644	0.51	-0.9
1,712,427	+		Synpcc7942_1644	0.51	-1.5
1,712,451	-		Synpcc7942_1644	0.54	+3.7
1,712,526	+		Synpcc7942_1644	0.64	-1.3
1,712,534	-		Synpcc7942_1644	0.65	+1.7
1,712,534	-		Synpcc7942_1644	0.65	-1.1
1,712,534	-		Synpcc7942_1644	0.65	+0.1
1,712,534	-		Synpcc7942_1644	0.65	+2.9
1,712,601	-		Synpcc7942_1644	0.73	+0.1
1,712,607	-		Synpcc7942_1644	0.74	-1.3
1,712,619	+		Synpcc7942_1644	0.75	+2.2
1,712,621	+		Synpcc7942_1644	0.75	+4.6
1,712,627	-		Synpcc7942_1644	0.76	-0.9
1,712,687	+		Synpcc7942_1644	0.84	+1.4
1,712,687	+		Synpcc7942_1644	0.84	-0.5
1,712,690	-		Synpcc7942_1644	0.84	-2.5
1,712,720	-		Synpcc7942_1644	0.88	+1.3
1,712,731	+		Synpcc7942_1644	0.89	-2.1
1,712,731	+		Synpcc7942_1644	0.89	-3.0
1,712,739	-				+0.1
1,712,739	-				+1.1
1,712,762	+				+1.1
1,712,777	+				-0.3
1,712,777	+				+3.8
1,712,785	-				+0.7
1,712,840	+				+1.1
1,712,847	-				-0.9
1,712,858	+				-1.9
1,712,859	-				-0.5
1,712,866	-				+0.1
1,712,874	-				-2.4
1,712,874	-				+1.1
1,712,883	+				-2.9
1,712,884	+				-3.0
1,712,916	+				+0.9
1,712,916	+				+0.1
1,712,919	-				-1.9
1,712,931	-				-0.5
1,713,321	-				+1.3
1,713,321	-				-0.3
1,713,336	-				-2.0
1,713,378	+				-2.7
1,713,466	-	rnc	Synpcc7942_1645	0.18	+0.0
1,713,469	+	rnc	Synpcc7942_1645	0.18	-0.5
1,713,479	+	rnc	Synpcc7942_1645	0.20	-0.5
1,713,516	+	rnc	Synpcc7942_1645	0.25	-2.0
1,713,529	-	rnc	Synpcc7942_1645	0.26	-1.0
1,713,529	-	rnc	Synpcc7942_1645	0.26	+1.4
1,713,545	-	rnc	Synpcc7942_1645	0.29	-2.3
1,713,556	+	rnc	Synpcc7942_1645	0.30	-1.3
1,713,559	+	rnc	Synpcc7942_1645	0.31	-3.4
1,713,567	+	rnc	Synpcc7942_1645	0.32	+0.5
1,713,568	-	rnc	Synpcc7942_1645	0.32	-0.5
1,713,575	-	rnc	Synpcc7942_1645	0.33	+0.0
1,713,585	+	rnc	Synpcc7942_1645	0.34	-3.5
1,713,590	+	rnc	Synpcc7942_1645	0.35	+2.0
1,713,597	+	rnc	Synpcc7942_1645	0.36	-0.5
1,713,643	+	rnc	Synpcc7942_1645	0.42	+0.2
1,713,647	+	rnc	Synpcc7942_1645	0.42	+5.4
1,713,656	-	rnc	Synpcc7942_1645	0.44	+0.0
1,713,670	+	rnc	Synpcc7942_1645	0.45	+0.0
1,713,671	+				+1.0
1,713,679	-	rnc	Synpcc7942_1645	0.47	-0.5
1,713,683	+	rnc	Synpcc7942_1645	0.47	-2.8
1,713,701	+	rnc	Synpcc7942_1645	0.50	-0.4
1,713,744	-	rnc	Synpcc7942_1645	0.55	-2.6
1,713,746	+	rnc	Synpcc7942_1645	0.56	-1.4
1,713,750	+	rnc	Synpcc7942_1645	0.56	-0.7
1,713,750	+	rnc	Synpcc7942_1645	0.56	-1.3
1,713,758	-	rnc	Synpcc7942_1645	0.57	-1.5
1,713,760	+	rnc	Synpcc7942_1645	0.58	-2.4
1,713,760	+	rnc	Synpcc7942_1645	0.58	-1.3
1,713,768	-	rnc	Synpcc7942_1645	0.59	-2.3
1,713,789	-	rnc	Synpcc7942_1645	0.61	+1.0
1,713,789	-	rnc	Synpcc7942_1645	0.61	+1.0
1,713,823	+	rnc	Synpcc7942_1645	0.66	-1.0
1,713,826	-	rnc	Synpcc7942_1645	0.66	-1.4
1,713,834	-	rnc	Synpcc7942_1645	0.67	-2.0
1,713,847	+	rnc	Synpcc7942_1645	0.69	+0.2
1,713,847	+	rnc	Synpcc7942_1645	0.69	-1.0
1,713,847	+	rnc	Synpcc7942_1645	0.69	-1.0
1,713,847	+	rnc	Synpcc7942_1645	0.69	-0.3
1,713,847	+	rnc	Synpcc7942_1645	0.69	+1.6
1,713,847	+	rnc	Synpcc7942_1645	0.69	-2.7
1,713,847	+	rnc	Synpcc7942_1645	0.69	-0.5
1,713,855	-	rnc	Synpcc7942_1645	0.70	+1.5
1,713,855	-	rnc	Synpcc7942_1645	0.70	-2.1
1,713,860	-	rnc	Synpcc7942_1645	0.71	-3.3
1,713,868	-	rnc	Synpcc7942_1645	0.72	+0.0
1,713,868	-	rnc	Synpcc7942_1645	0.72	-1.0
1,713,870	+	rnc	Synpcc7942_1645	0.72	-2.1
1,713,906	+	rnc	Synpcc7942_1645	0.77	+1.0
1,713,914	-	rnc	Synpcc7942_1645	0.78	-2.8
1,713,914	-	rnc	Synpcc7942_1645	0.78	-1.0
1,713,919	+	rnc	Synpcc7942_1645	0.79	-2.4
1,713,933	-	rnc	Synpcc7942_1645	0.81	-1.3
1,714,013	+				-1.8
1,714,047	+				-1.5
1,714,160	-				-1.0
1,714,267	-				+3.6
1,714,277	+				+2.1
1,714,277	+				+2.8
1,714,277	+				-1.0
1,714,284	+				+1.5
1,714,285	-				-0.9
1,714,285	-				+0.5
1,714,285	-				-2.5
1,714,285	-				+1.9
1,714,292	-				-2.7
1,714,296	+				-1.0
1,714,296	+				-1.3
1,714,296	+				-1.0
1,714,296	+				+1.0
1,714,296	+				-1.5
1,714,304	-				+0.5
1,714,324	+				-0.5
1,714,330	-				+0.5
1,714,330	-				+1.0
1,714,375	-				-2.4
1,714,394	-				-1.5
1,714,401	+				+0.0
1,714,409	-				-1.3
1,714,411	+				+1.5
1,714,411	+				-2.3
1,714,527	-		Synpcc7942_1646	0.25	-1.5
1,714,591	+		Synpcc7942_1646	0.34	-1.0
1,714,591	+		Synpcc7942_1646	0.34	-1.0
1,714,591	+		Synpcc7942_1646	0.34	+3.5
1,714,591	+		Synpcc7942_1646	0.34	-1.5
1,714,599	-		Synpcc7942_1646	0.35	+1.8
1,714,599	-		Synpcc7942_1646	0.35	-0.7
1,714,599	-		Synpcc7942_1646	0.35	-0.5
1,714,599	-		Synpcc7942_1646	0.35	-2.5
1,714,712	-		Synpcc7942_1646	0.50	-1.3
1,714,712	-		Synpcc7942_1646	0.50	+0.9
1,714,713	-		Synpcc7942_1646	0.50	+0.0
1,714,740	-		Synpcc7942_1646	0.54	+1.8
1,714,741	+		Synpcc7942_1646	0.54	-1.5
1,714,742	+		Synpcc7942_1646	0.54	+1.0
1,714,742	+		Synpcc7942_1646	0.54	-2.0
1,714,763	+		Synpcc7942_1646	0.57	+3.7
1,714,764	+		Synpcc7942_1646	0.58	-0.3
1,714,769	+		Synpcc7942_1646	0.58	+0.5
1,714,785	-		Synpcc7942_1646	0.60	-0.6
1,714,793	-		Synpcc7942_1646	0.62	+0.9
1,714,793	-		Synpcc7942_1646	0.62	-0.6
1,714,856	+		Synpcc7942_1646	0.70	-1.8
1,714,874	-		Synpcc7942_1646	0.73	+1.6
1,714,874	-		Synpcc7942_1646	0.73	-0.5
1,714,898	+		Synpcc7942_1646	0.76	-2.5
1,715,001	+				-2.7
1,715,009	-				-0.5
1,715,012	-				+2.2
1,715,014	-				-1.5
1,715,066	+				-0.5