Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1502

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,551,665	-				+2.6
1,551,737	+				-1.5
1,551,747	-				-0.7
1,551,747	-				+1.4
1,551,774	+				-1.5
1,551,782	-				+2.4
1,551,787	+				-1.0
1,551,787	+				-1.0
1,551,787	+				-1.3
1,551,787	+				+0.0
1,551,788	-				+1.0
1,551,795	-				-1.5
1,551,828	+		Synpcc7942_1502	0.15	-1.0
1,551,840	-		Synpcc7942_1502	0.17	-1.0
1,551,850	-		Synpcc7942_1502	0.19	-1.0
1,551,860	-		Synpcc7942_1502	0.21	-0.5
1,551,884	-		Synpcc7942_1502	0.25	-1.0
1,551,889	+		Synpcc7942_1502	0.26	-3.8
1,551,927	+		Synpcc7942_1502	0.33	-0.5
1,551,932	+		Synpcc7942_1502	0.34	-1.3
1,551,932	+		Synpcc7942_1502	0.34	+0.0
1,551,932	+		Synpcc7942_1502	0.34	-2.0
1,551,932	+		Synpcc7942_1502	0.34	-2.5
1,551,932	+		Synpcc7942_1502	0.34	-3.3
1,551,932	+		Synpcc7942_1502	0.34	+1.3
1,551,940	-		Synpcc7942_1502	0.35	-1.5
1,551,940	-		Synpcc7942_1502	0.35	-1.0
1,551,940	-		Synpcc7942_1502	0.35	+0.0
1,551,940	-		Synpcc7942_1502	0.35	-3.0
1,551,940	-		Synpcc7942_1502	0.35	+2.0
1,551,955	+		Synpcc7942_1502	0.38	-3.0
1,552,037	-		Synpcc7942_1502	0.53	-0.5
1,552,037	-		Synpcc7942_1502	0.53	-3.4
1,552,051	+		Synpcc7942_1502	0.55	-1.6
1,552,054	-		Synpcc7942_1502	0.56	-0.5
1,552,055	-		Synpcc7942_1502	0.56	+0.0
1,552,064	-		Synpcc7942_1502	0.57	+1.0
1,552,079	-		Synpcc7942_1502	0.60	+1.0
1,552,081	+		Synpcc7942_1502	0.60	-1.0
1,552,107	-		Synpcc7942_1502	0.65	-3.2
1,552,110	-		Synpcc7942_1502	0.66	-1.3
1,552,138	-		Synpcc7942_1502	0.71	-1.5
1,552,147	-		Synpcc7942_1502	0.72	-2.0
1,552,189	-				+1.0
1,552,225	+		Synpcc7942_1502	0.86	-2.0
1,552,244	+				+1.0
1,552,247	-				+0.0
1,552,247	-				-3.6
1,552,247	-				-2.9
1,552,247	-				+0.0
1,552,247	-				-2.0
1,552,276	+				+0.7
1,552,283	+				-1.0
1,552,285	+				-0.5
1,552,285	+				-2.2
1,552,285	+				-1.3
1,552,285	+				+0.0
1,552,293	-				-1.0
1,552,293	-				-2.3
1,552,297	+				+0.7
1,552,303	-				-0.5
1,552,305	-				+0.0
1,552,339	-				-0.5
1,552,423	+	ylmH	Synpcc7942_1503	0.15	+1.0
1,552,431	-	ylmH	Synpcc7942_1503	0.16	+0.5
1,552,444	+	ylmH	Synpcc7942_1503	0.18	-1.5
1,552,449	-	ylmH	Synpcc7942_1503	0.19	-1.0
1,552,449	-	ylmH	Synpcc7942_1503	0.19	-1.8
1,552,449	-	ylmH	Synpcc7942_1503	0.19	-1.3
1,552,455	+	ylmH	Synpcc7942_1503	0.19	+2.6
1,552,484	-	ylmH	Synpcc7942_1503	0.23	+4.5
1,552,503	+	ylmH	Synpcc7942_1503	0.26	-1.0
1,552,503	+	ylmH	Synpcc7942_1503	0.26	-1.8
1,552,510	+	ylmH	Synpcc7942_1503	0.27	+4.3
1,552,517	+	ylmH	Synpcc7942_1503	0.27	-1.0
1,552,541	-	ylmH	Synpcc7942_1503	0.31	-1.0
1,552,552	-	ylmH	Synpcc7942_1503	0.32	-0.5
1,552,584	-	ylmH	Synpcc7942_1503	0.36	-1.0
1,552,593	+	ylmH	Synpcc7942_1503	0.37	-0.2
1,552,593	+	ylmH	Synpcc7942_1503	0.37	-0.2
1,552,640	-	ylmH	Synpcc7942_1503	0.43	-2.0
1,552,643	+	ylmH	Synpcc7942_1503	0.44	-2.3
1,552,651	-	ylmH	Synpcc7942_1503	0.45	+2.6
1,552,656	-	ylmH	Synpcc7942_1503	0.45	-2.4
1,552,656	-	ylmH	Synpcc7942_1503	0.45	-1.3
1,552,656	-	ylmH	Synpcc7942_1503	0.45	-0.5
1,552,656	-	ylmH	Synpcc7942_1503	0.45	-1.3
1,552,705	+	ylmH	Synpcc7942_1503	0.52	-0.5
1,552,715	+	ylmH	Synpcc7942_1503	0.53	+1.0
1,552,723	-	ylmH	Synpcc7942_1503	0.54	+0.3
1,552,746	+	ylmH	Synpcc7942_1503	0.57	+2.2
1,552,752	-	ylmH	Synpcc7942_1503	0.58	+1.8
1,552,808	+	ylmH	Synpcc7942_1503	0.65	+1.0
1,552,816	-	ylmH	Synpcc7942_1503	0.66	-1.5
1,552,816	-	ylmH	Synpcc7942_1503	0.66	-1.0
1,552,849	+	ylmH	Synpcc7942_1503	0.70	+4.2
1,552,888	-	ylmH	Synpcc7942_1503	0.75	+1.0
1,552,911	+	ylmH	Synpcc7942_1503	0.78	-0.5
1,552,922	-	ylmH	Synpcc7942_1503	0.79	-1.3
1,552,927	-	ylmH	Synpcc7942_1503	0.80	-1.3
1,552,954	+	ylmH	Synpcc7942_1503	0.83	-2.1
1,552,959	+	ylmH	Synpcc7942_1503	0.84	-3.7
1,552,962	-	ylmH	Synpcc7942_1503	0.84	+3.1
1,552,964	+	ylmH	Synpcc7942_1503	0.85	+0.3
1,552,967	-	ylmH	Synpcc7942_1503	0.85	-1.3
1,552,967	-	ylmH	Synpcc7942_1503	0.85	+2.7
1,552,969	-	ylmH	Synpcc7942_1503	0.85	+2.8
1,552,986	+	ylmH	Synpcc7942_1503	0.88	-1.8
1,552,994	-	ylmH	Synpcc7942_1503	0.89	+1.3
1,552,994	-	ylmH	Synpcc7942_1503	0.89	-1.0
1,552,994	-	ylmH	Synpcc7942_1503	0.89	-2.1
1,552,996	-	ylmH	Synpcc7942_1503	0.89	-1.0
1,553,004	-	ylmH	Synpcc7942_1503	0.90	+0.9
1,553,136	-				+1.0
1,553,142	-				+2.7
1,553,246	-				+2.3
1,553,289	+				-1.0
1,553,297	-				+0.4