Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1398

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,446,880	+		Synpcc7942_1397	0.52	+2.6
1,446,880	+		Synpcc7942_1397	0.52	+2.6
1,446,883	-		Synpcc7942_1397	0.52	+1.1
1,446,888	-		Synpcc7942_1397	0.52	-0.5
1,446,888	-		Synpcc7942_1397	0.52	-0.5
1,446,888	-		Synpcc7942_1397	0.52	+2.9
1,446,888	-		Synpcc7942_1397	0.52	-2.1
1,446,888	-		Synpcc7942_1397	0.52	+0.8
1,446,927	-		Synpcc7942_1397	0.55	+0.1
1,447,066	+		Synpcc7942_1397	0.66	-1.7
1,447,066	+		Synpcc7942_1397	0.66	-1.6
1,447,156	-		Synpcc7942_1397	0.73	+2.7
1,447,176	+		Synpcc7942_1397	0.74	+0.2
1,447,228	-		Synpcc7942_1397	0.78	-1.8
1,447,235	+		Synpcc7942_1397	0.79	+0.5
1,447,243	-		Synpcc7942_1397	0.79	-0.9
1,447,257	+		Synpcc7942_1397	0.80	-1.7
1,447,259	+		Synpcc7942_1397	0.80	-2.9
1,447,259	+		Synpcc7942_1397	0.80	-2.9
1,447,259	+		Synpcc7942_1397	0.80	+2.5
1,447,259	+		Synpcc7942_1397	0.80	-2.1
1,447,269	-		Synpcc7942_1397	0.81	-0.3
1,447,277	-		Synpcc7942_1397	0.82	-0.5
1,447,279	+		Synpcc7942_1397	0.82	-0.5
1,447,280	-		Synpcc7942_1397	0.82	-5.1
1,447,298	-		Synpcc7942_1397	0.83	-1.7
1,447,299	-		Synpcc7942_1397	0.83	+2.4
1,447,362	-		Synpcc7942_1397	0.88	-2.4
1,447,367	+		Synpcc7942_1397	0.88	-2.5
1,447,373	+		Synpcc7942_1397	0.89	+1.1
1,447,381	+		Synpcc7942_1397	0.90	+2.0
1,447,383	+		Synpcc7942_1397	0.90	+3.5
1,447,383	+		Synpcc7942_1397	0.90	-0.9
1,447,404	+				+2.6
1,447,412	+				-0.9
1,447,420	-				+0.1
1,447,520	+				+0.1
1,447,526	+				-0.9
1,447,560	+				-1.5
1,447,567	-				+2.1
1,447,567	-				+2.3
1,447,568	-				-2.5
1,447,569	+				-0.2
1,447,578	-				+0.1
1,447,616	+				+1.6
1,447,676	-				+0.6
1,447,714	-				+1.1
1,447,753	+				+1.1
1,447,761	-				+1.4
1,447,761	-				+0.5
1,447,844	+				-1.5
1,447,852	-				-1.3
1,447,852	-				+2.5
1,447,949	+				+1.1
1,447,954	+				-1.9
1,447,962	-				-0.9
1,448,050	+				-1.7
1,448,050	-				-0.9
1,448,088	-		Synpcc7942_1398	0.11	+3.4
1,448,163	-		Synpcc7942_1398	0.14	+0.1
1,448,169	+		Synpcc7942_1398	0.14	-1.8
1,448,211	-		Synpcc7942_1398	0.16	+0.9
1,448,226	-		Synpcc7942_1398	0.17	+1.8
1,448,239	+		Synpcc7942_1398	0.18	-1.8
1,448,564	-		Synpcc7942_1398	0.32	+1.5
1,448,730	+		Synpcc7942_1398	0.40	-1.5
1,448,761	-		Synpcc7942_1398	0.41	+0.1
1,448,774	+		Synpcc7942_1398	0.42	+1.5
1,448,774	-		Synpcc7942_1398	0.42	+0.4
1,448,811	-		Synpcc7942_1398	0.43	-3.3
1,448,823	+		Synpcc7942_1398	0.44	+3.5
1,448,880	-		Synpcc7942_1398	0.46	-0.2
1,449,023	-		Synpcc7942_1398	0.53	-0.7
1,449,035	+		Synpcc7942_1398	0.53	-0.5
1,449,035	+				+1.1
1,449,035	+		Synpcc7942_1398	0.53	+3.0
1,449,035	+		Synpcc7942_1398	0.53	+1.8
1,449,035	+		Synpcc7942_1398	0.53	-1.4
1,449,043	-		Synpcc7942_1398	0.54	-1.2
1,449,043	-		Synpcc7942_1398	0.54	-3.6
1,449,135	+		Synpcc7942_1398	0.58	-0.5
1,449,194	+		Synpcc7942_1398	0.61	+0.6
1,449,238	+		Synpcc7942_1398	0.63	-0.9
1,449,380	-		Synpcc7942_1398	0.69	+3.4
1,449,554	+		Synpcc7942_1398	0.77	-1.7
1,449,746	+		Synpcc7942_1398	0.85	+1.9
1,449,896	-				-0.2
1,450,029	-				+1.1
1,450,056	-				+3.3
1,450,062	-				+1.1
1,450,135	-				+4.9
1,450,142	+				-0.6
1,450,325	-		Synpcc7942_1399	0.21	+0.5
1,450,433	+		Synpcc7942_1399	0.30	+5.2
1,450,466	-		Synpcc7942_1399	0.33	-0.5
1,450,490	+		Synpcc7942_1399	0.35	-1.9
1,450,622	-		Synpcc7942_1399	0.46	-1.7
1,450,622	-		Synpcc7942_1399	0.46	+0.1
1,450,783	-		Synpcc7942_1399	0.60	+0.9
1,450,935	+		Synpcc7942_1399	0.73	+4.6
1,450,988	+		Synpcc7942_1399	0.78	+1.1
1,450,988	+		Synpcc7942_1399	0.78	+2.5
1,450,991	-		Synpcc7942_1399	0.78	+3.0
1,450,996	-		Synpcc7942_1399	0.79	+3.2
1,450,996	-		Synpcc7942_1399	0.79	-1.5
1,450,996	-		Synpcc7942_1399	0.79	+1.1
1,450,998	+		Synpcc7942_1399	0.79	-0.5
1,451,000	+		Synpcc7942_1399	0.79	+1.9
1,451,000	+		Synpcc7942_1399	0.79	-1.0
1,451,002	+		Synpcc7942_1399	0.79	-0.9
1,451,008	-		Synpcc7942_1399	0.80	-2.6
1,451,008	-		Synpcc7942_1399	0.80	+1.8
1,451,008	-		Synpcc7942_1399	0.80	+2.0
1,451,019	-		Synpcc7942_1399	0.81	+0.9