Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1381

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,423,769	-		Synpcc7942_1380	0.52	-0.5
1,423,841	-		Synpcc7942_1380	0.56	-1.3
1,423,841	-		Synpcc7942_1380	0.56	+3.7
1,423,845	+		Synpcc7942_1380	0.56	-1.5
1,423,877	+		Synpcc7942_1380	0.58	-1.5
1,423,882	+		Synpcc7942_1380	0.58	-1.9
1,423,882	+		Synpcc7942_1380	0.58	-0.5
1,423,890	-		Synpcc7942_1380	0.59	-3.2
1,423,904	+		Synpcc7942_1380	0.59	-1.3
1,423,921	-		Synpcc7942_1380	0.60	+2.1
1,423,926	+		Synpcc7942_1380	0.61	+0.1
1,423,931	-		Synpcc7942_1380	0.61	+2.5
1,423,947	+		Synpcc7942_1380	0.62	+4.6
1,423,955	-		Synpcc7942_1380	0.62	-1.5
1,423,967	-		Synpcc7942_1380	0.63	+0.1
1,423,975	+		Synpcc7942_1380	0.64	-0.4
1,424,000	+		Synpcc7942_1380	0.65	-0.9
1,424,000	+		Synpcc7942_1380	0.65	-0.9
1,424,017	+		Synpcc7942_1380	0.66	-2.1
1,424,041	-		Synpcc7942_1380	0.67	-1.9
1,424,051	-		Synpcc7942_1380	0.68	+2.6
1,424,064	+		Synpcc7942_1380	0.69	+3.0
1,424,074	+		Synpcc7942_1380	0.69	-0.9
1,424,089	+		Synpcc7942_1380	0.70	-0.9
1,424,097	-		Synpcc7942_1380	0.71	-1.9
1,424,097	-		Synpcc7942_1380	0.71	+4.3
1,424,256	+		Synpcc7942_1380	0.80	+2.0
1,424,280	-		Synpcc7942_1380	0.81	-1.3
1,424,326	-		Synpcc7942_1380	0.84	-1.6
1,424,342	+		Synpcc7942_1380	0.85	-1.3
1,424,347	+		Synpcc7942_1380	0.85	+3.5
1,424,425	+		Synpcc7942_1380	0.90	+0.4
1,424,431	+				-1.5
1,424,484	+				+1.9
1,424,498	+				+1.6
1,424,498	+				-0.8
1,424,498	+				+0.1
1,424,498	+				-2.3
1,424,498	+				-2.2
1,424,498	-				+0.2
1,424,506	-				-2.5
1,424,506	-				+2.2
1,424,506	-				+1.1
1,424,506	-				-0.1
1,424,600	+				+1.4
1,424,661	-				+2.4
1,424,702	+				+0.5
1,424,725	-				-0.3
1,424,733	+				-1.9
1,424,736	+				-0.5
1,424,751	+				-1.5
1,424,760	-				-1.3
1,424,835	+				-0.9
1,424,852	-				+0.8
1,424,862	+				+3.3
1,424,872	+				-0.7
1,424,880	-		Synpcc7942_1381	0.10	+3.7
1,424,898	+		Synpcc7942_1381	0.11	-1.7
1,424,906	-				-0.5
1,424,920	-		Synpcc7942_1381	0.12	+4.8
1,424,920	-		Synpcc7942_1381	0.12	+2.1
1,424,920	-		Synpcc7942_1381	0.12	-1.9
1,424,931	+		Synpcc7942_1381	0.13	-0.4
1,424,939	-		Synpcc7942_1381	0.13	+4.8
1,424,944	-		Synpcc7942_1381	0.13	+1.5
1,424,947	+		Synpcc7942_1381	0.14	+1.4
1,424,950	-		Synpcc7942_1381	0.14	-0.5
1,424,972	-		Synpcc7942_1381	0.15	-0.9
1,425,015	+		Synpcc7942_1381	0.17	+0.8
1,425,023	-		Synpcc7942_1381	0.18	+0.1
1,425,029	+		Synpcc7942_1381	0.18	+3.8
1,425,044	-		Synpcc7942_1381	0.19	-0.3
1,425,066	-		Synpcc7942_1381	0.20	+1.6
1,425,076	-		Synpcc7942_1381	0.20	-0.5
1,425,096	+		Synpcc7942_1381	0.21	-0.9
1,425,096	-		Synpcc7942_1381	0.21	-1.3
1,425,143	-		Synpcc7942_1381	0.24	-0.9
1,425,150	-		Synpcc7942_1381	0.24	-1.3
1,425,233	-		Synpcc7942_1381	0.28	-2.5
1,425,310	+		Synpcc7942_1381	0.32	+1.1
1,425,310	+		Synpcc7942_1381	0.32	+1.1
1,425,310	+		Synpcc7942_1381	0.32	+1.2
1,425,318	-		Synpcc7942_1381	0.33	-0.9
1,425,318	-		Synpcc7942_1381	0.33	-1.5
1,425,445	+		Synpcc7942_1381	0.39	-1.7
1,425,455	+		Synpcc7942_1381	0.40	+1.1
1,425,478	+		Synpcc7942_1381	0.41	-0.5
1,425,492	+		Synpcc7942_1381	0.42	+0.2
1,425,525	-		Synpcc7942_1381	0.44	-0.9
1,425,581	+		Synpcc7942_1381	0.47	+2.6
1,425,852	-		Synpcc7942_1381	0.61	-0.9
1,425,953	+		Synpcc7942_1381	0.66	+3.1
1,425,953	+		Synpcc7942_1381	0.66	+4.0
1,426,009	-		Synpcc7942_1381	0.69	+2.8
1,426,029	+		Synpcc7942_1381	0.70	-1.5
1,426,054	-		Synpcc7942_1381	0.71	+5.0
1,426,204	+		Synpcc7942_1381	0.79	-1.5
1,426,253	+		Synpcc7942_1381	0.81	-2.4
1,426,481	-				-1.9
1,426,481	-				+1.3
1,426,492	+				-1.9
1,426,539	+				+0.1
1,426,586	-				+1.1
1,426,605	+				-0.4
1,426,691	+				+0.1
1,426,704	-				-3.1
1,426,704	-				+1.1
1,426,704	-				-2.6
1,426,704	-				+1.1
1,426,704	-				-0.5
1,426,704	-				+2.6
1,426,704	-				-2.1
1,426,704	-				+0.1
1,426,742	+				+0.1
1,426,753	+				-1.7
1,426,893	-				+0.1
1,426,934	+				+2.2
1,427,053	-				+3.9
1,427,063	-				-2.5
1,427,121	-				+4.0
1,427,184	+				+0.2
1,427,223	+				-0.9
1,427,224	-				+3.4
1,427,240	+				-0.9
1,427,243	-				-1.0
1,427,341	+		Synpcc7942_1382	0.11	-2.1
1,427,365	+		Synpcc7942_1382	0.12	-1.2
1,427,374	-		Synpcc7942_1382	0.12	-2.1
1,427,391	+		Synpcc7942_1382	0.13	+5.2
1,427,398	-		Synpcc7942_1382	0.13	+3.8
1,427,399	-		Synpcc7942_1382	0.13	+3.3
1,427,459	+		Synpcc7942_1382	0.16	+1.1
1,427,467	-		Synpcc7942_1382	0.16	-0.9
1,427,469	+		Synpcc7942_1382	0.16	+0.1
1,427,472	-		Synpcc7942_1382	0.16	+2.3
1,427,571	+		Synpcc7942_1382	0.20	-3.4