Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1369

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,406,206	-		Synpcc7942_1367	0.69	-1.7
1,406,265	-		Synpcc7942_1367	0.73	+0.8
1,406,267	+		Synpcc7942_1367	0.73	-0.9
1,406,267	+		Synpcc7942_1367	0.73	+1.1
1,406,267	+		Synpcc7942_1367	0.73	+0.5
1,406,267	+		Synpcc7942_1367	0.73	+0.1
1,406,267	+		Synpcc7942_1367	0.73	-0.9
1,406,275	-		Synpcc7942_1367	0.74	-1.2
1,406,275	-		Synpcc7942_1367	0.74	-2.4
1,406,275	-		Synpcc7942_1367	0.74	-0.9
1,406,315	+		Synpcc7942_1367	0.77	-1.5
1,406,337	+		Synpcc7942_1367	0.79	-0.8
1,406,337	+		Synpcc7942_1367	0.79	+0.1
1,406,338	+		Synpcc7942_1367	0.79	-0.9
1,406,338	+		Synpcc7942_1367	0.79	-3.2
1,406,345	-		Synpcc7942_1367	0.79	+1.1
1,406,348	+		Synpcc7942_1367	0.79	-2.5
1,406,425	-		Synpcc7942_1367	0.85	-3.8
1,406,427	+		Synpcc7942_1367	0.85	-0.5
1,406,438	-		Synpcc7942_1367	0.86	-0.5
1,406,450	-		Synpcc7942_1367	0.87	-2.2
1,406,457	+		Synpcc7942_1367	0.87	-0.6
1,406,463	+		Synpcc7942_1367	0.88	+2.1
1,406,499	+				+4.2
1,406,509	-				-1.2
1,406,511	+				-2.7
1,406,526	+				-0.5
1,406,547	+				-0.5
1,406,547	+				-2.6
1,406,558	+				+0.7
1,406,598	+				-0.6
1,406,601	+				-0.1
1,406,612	+				+0.1
1,406,624	+				-1.2
1,406,652	+				-1.6
1,406,661	+				-2.8
1,406,664	+				-0.5
1,406,665	-				-1.2
1,406,674	+				+0.2
1,406,674	+				-1.9
1,406,674	+				+1.3
1,406,674	-				-1.5
1,406,676	+				+3.4
1,406,676	+				-1.7
1,406,676	+				+0.1
1,406,682	-				-1.5
1,406,682	-				-2.2
1,406,684	+				+0.1
1,406,684	-				+0.1
1,406,684	-				-0.5
1,406,696	+		Synpcc7942_1368	0.12	-1.5
1,406,707	+		Synpcc7942_1368	0.15	-0.5
1,406,737	-		Synpcc7942_1368	0.24	-2.1
1,406,742	-				+0.1
1,406,749	+		Synpcc7942_1368	0.27	-1.9
1,406,812	+		Synpcc7942_1368	0.46	-1.9
1,406,817	+		Synpcc7942_1368	0.48	-3.8
1,406,819	+		Synpcc7942_1368	0.48	+0.1
1,406,834	-		Synpcc7942_1368	0.53	-3.2
1,406,867	-		Synpcc7942_1368	0.62	-0.1
1,406,877	+		Synpcc7942_1368	0.65	-0.5
1,406,885	+		Synpcc7942_1368	0.68	-3.3
1,406,885	-		Synpcc7942_1368	0.68	+1.1
1,406,927	+		Synpcc7942_1368	0.80	-0.2
1,406,929	-		Synpcc7942_1368	0.81	+0.1
1,406,960	+				+0.1
1,406,960	+				+1.1
1,406,965	+				-0.9
1,406,965	+				-1.9
1,406,968	-				+1.1
1,406,968	-				-0.5
1,406,968	-				-2.8
1,406,968	-				-1.8
1,406,973	-				-0.2
1,406,973	-				+0.5
1,406,986	+				+0.6
1,406,986	+				+2.0
1,406,994	-				+0.8
1,406,994	-				-0.7
1,407,025	+				-2.1
1,407,123	+				+0.1
1,407,151	+				+0.9
1,407,159	-				-1.2
1,407,171	-				+1.1
1,407,194	+				-0.9
1,407,199	+				+3.3
1,407,207	-				+0.9
1,407,212	-				-2.2
1,407,839	-				-2.8
1,407,840	-				+1.1
1,407,840	-				-1.7
1,407,853	-				+0.1
1,407,855	+				+1.1
1,407,863	-				+2.7
1,407,863	-				+0.9
1,407,863	-				-0.3
1,407,881	+				-0.2
1,407,889	-				+2.1
1,407,891	+				+3.3
1,407,921	+				+4.4
1,407,921	+				+0.1
1,407,921	+				+1.4
1,407,921	+				+5.8
1,407,921	+				+0.1
1,407,921	+				+0.1
1,407,921	+				+0.6
1,407,921	+				-1.2
1,407,929	-				+1.1
1,407,929	-				-0.9
1,407,929	-				+4.0
1,407,929	-				-0.8
1,407,929	-				+3.1
1,407,929	-				+1.9
1,407,929	-				-2.3
1,407,932	+				+0.1
1,407,937	+				-1.9
1,407,937	+				-0.2
1,407,937	+				+2.1
1,407,937	+				-0.8
1,407,937	+				-2.1
1,407,937	+				+0.8
1,407,939	-				-2.5
1,407,939	-				-0.1
1,407,939	-				-0.9
1,407,945	-				+0.1
1,407,945	-				+2.8
1,407,945	-				-1.9
1,407,945	-				-0.5
1,407,945	-				-2.6
1,407,945	-				-2.6
1,407,945	-				-1.1
1,407,945	-				-0.9
1,407,947	+				-0.9
1,407,947	+				-0.5
1,407,947	+				+1.2
1,407,957	+				-1.5
1,407,977	-				-0.9
1,407,989	+		Synpcc7942_1370	0.11	-1.2
1,407,991	-		Synpcc7942_1370	0.12	-1.5
1,408,042	+		Synpcc7942_1370	0.33	-0.9
1,408,055	-		Synpcc7942_1370	0.38	+0.2
1,408,074	+		Synpcc7942_1370	0.46	+1.8
1,408,095	-		Synpcc7942_1370	0.55	+0.2
1,408,097	-		Synpcc7942_1370	0.56	-0.6
1,408,122	+		Synpcc7942_1370	0.66	-0.7
1,408,133	+		Synpcc7942_1370	0.71	-1.7
1,408,133	+		Synpcc7942_1370	0.71	+0.8
1,408,141	-		Synpcc7942_1370	0.74	+1.1
1,408,141	-		Synpcc7942_1370	0.74	+2.8
1,408,141	-		Synpcc7942_1370	0.74	+2.5
1,408,146	-		Synpcc7942_1370	0.76	+1.4
1,408,187	+				-2.1
1,408,190	-				-3.0
1,408,211	-				-0.5
1,408,213	-				-1.2
1,408,216	+				+0.5
1,408,219	-				-1.3
1,408,221	+				-1.7
1,408,228	+				-0.9
1,408,233	+				-1.5
1,408,236	-				+0.1
1,408,238	+				+1.3
1,408,254	-				-1.2
1,408,310	-				+0.1
1,408,332	+	corA	Synpcc7942_1371	0.11	+0.8
1,408,334	-	corA	Synpcc7942_1371	0.11	+0.1
1,408,374	-	corA	Synpcc7942_1371	0.15	-0.2
1,408,419	-	corA	Synpcc7942_1371	0.18	-1.2
1,408,482	+	corA	Synpcc7942_1371	0.24	+1.1
1,408,482	+	corA	Synpcc7942_1371	0.24	-0.5
1,408,490	-	corA	Synpcc7942_1371	0.24	+4.3
1,408,552	+	corA	Synpcc7942_1371	0.30	+1.1
1,408,552	+	corA	Synpcc7942_1371	0.30	-2.3
1,408,552	+	corA	Synpcc7942_1371	0.30	-0.5
1,408,552	+	corA	Synpcc7942_1371	0.30	-1.3
1,408,562	+	corA	Synpcc7942_1371	0.31	+0.1
1,408,565	+	corA	Synpcc7942_1371	0.31	+3.8
1,408,572	+				+0.1
1,408,578	-	corA	Synpcc7942_1371	0.32	+0.1
1,408,578	-	corA	Synpcc7942_1371	0.32	-2.5
1,408,600	-	corA	Synpcc7942_1371	0.34	-0.5
1,408,600	-	corA	Synpcc7942_1371	0.34	-0.5
1,408,622	+	corA	Synpcc7942_1371	0.36	-1.3
1,408,630	-	corA	Synpcc7942_1371	0.37	-1.3
1,408,655	+	corA	Synpcc7942_1371	0.39	-1.3
1,408,655	+				+0.1
1,408,681	+	corA	Synpcc7942_1371	0.41	-1.7
1,408,684	-	corA	Synpcc7942_1371	0.41	-0.9
1,408,689	+	corA	Synpcc7942_1371	0.42	+1.5
1,408,692	+	corA	Synpcc7942_1371	0.42	+2.6
1,408,710	-	corA	Synpcc7942_1371	0.43	-1.3
1,408,710	-	corA	Synpcc7942_1371	0.43	-1.1
1,408,718	+	corA	Synpcc7942_1371	0.44	-3.6
1,408,726	-	corA	Synpcc7942_1371	0.45	-0.9
1,408,731	+	corA	Synpcc7942_1371	0.45	-2.5
1,408,742	+	corA	Synpcc7942_1371	0.46	-0.5
1,408,755	+				-1.5
1,408,755	+	corA	Synpcc7942_1371	0.47	+1.1
1,408,755	+	corA	Synpcc7942_1371	0.47	+0.1
1,408,761	+	corA	Synpcc7942_1371	0.48	+3.6
1,408,763	-	corA	Synpcc7942_1371	0.48	+1.9