Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1325

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,354,816	-		Synpcc7942_1324	0.72	-1.2
1,354,816	-		Synpcc7942_1324	0.72	+3.1
1,354,834	+		Synpcc7942_1324	0.73	-0.5
1,354,834	+				-1.2
1,354,839	+		Synpcc7942_1324	0.73	+0.4
1,354,842	-		Synpcc7942_1324	0.73	+1.1
1,354,842	-		Synpcc7942_1324	0.73	+0.7
1,354,922	+		Synpcc7942_1324	0.76	+0.9
1,354,953	+		Synpcc7942_1324	0.77	-0.9
1,354,953	+				+2.7
1,355,005	+		Synpcc7942_1324	0.79	-1.7
1,355,017	+		Synpcc7942_1324	0.79	+4.9
1,355,017	+		Synpcc7942_1324	0.79	+1.1
1,355,053	+		Synpcc7942_1324	0.81	+1.1
1,355,053	+		Synpcc7942_1324	0.81	+0.6
1,355,061	-		Synpcc7942_1324	0.81	-1.9
1,355,063	-		Synpcc7942_1324	0.81	-0.1
1,355,063	-		Synpcc7942_1324	0.81	+1.3
1,355,069	-		Synpcc7942_1324	0.81	+1.1
1,355,074	-		Synpcc7942_1324	0.81	+0.1
1,355,080	+		Synpcc7942_1324	0.82	-0.2
1,355,080	+		Synpcc7942_1324	0.82	-2.7
1,355,080	+		Synpcc7942_1324	0.82	+0.1
1,355,088	-		Synpcc7942_1324	0.82	-0.5
1,355,088	-		Synpcc7942_1324	0.82	-1.9
1,355,126	-		Synpcc7942_1324	0.83	-1.2
1,355,136	-		Synpcc7942_1324	0.84	-0.5
1,355,136	-				-0.9
1,355,149	+		Synpcc7942_1324	0.84	-1.2
1,355,157	-		Synpcc7942_1324	0.84	+1.5
1,355,183	-		Synpcc7942_1324	0.85	+0.1
1,355,211	-		Synpcc7942_1324	0.86	-0.5
1,355,222	+		Synpcc7942_1324	0.87	-1.2
1,355,255	+		Synpcc7942_1324	0.88	-0.9
1,355,263	-		Synpcc7942_1324	0.88	+0.6
1,355,315	-				-2.9
1,355,322	-				-2.1
1,355,349	-				-1.5
1,355,349	-				+1.1
1,355,352	+				-0.5
1,355,355	-				+0.7
1,355,355	-				-0.5
1,355,385	-				-3.2
1,355,398	+				-1.0
1,355,468	+				+1.1
1,355,476	-				+1.1
1,355,479	+				-3.0
1,355,479	+				+3.3
1,355,487	-				+1.7
1,355,515	+				+1.9
1,355,548	-				-1.5
1,355,558	+				+2.4
1,355,566	-				-1.7
1,355,571	-				-0.7
1,355,615	-				-2.1
1,355,625	-				-1.7
1,355,633	-				+0.2
1,355,636	+				+2.7
1,355,640	+				+0.1
1,355,640	+				-2.2
1,355,640	+				+3.2
1,355,648	-				-2.8
1,355,648	-				+1.9
1,355,648	-				-1.7
1,355,648	-				+0.4
1,355,650	-				+1.4
1,355,650	-				-0.2
1,355,661	+				-3.0
1,355,669	-				-0.3
1,355,670	-				-2.2
1,355,678	+				+2.7
1,355,678	+				+1.1
1,355,678	+				-0.9
1,355,678	+				-1.2
1,355,678	+				-1.5
1,355,678	+				+0.1
1,355,683	+				+0.1
1,355,686	-				-1.2
1,355,686	-				+0.5
1,355,686	-				+1.9
1,355,687	-				-2.0
1,355,691	-				+0.1
1,355,691	-				-0.9
1,355,691	-				+1.1
1,355,693	+				+3.1
1,355,726	+				+0.9
1,355,734	+				-2.0
1,355,739	+				+0.1
1,355,742	-				-0.9
1,355,748	+				+0.5
1,355,774	+				-0.6
1,357,132	+				+0.8
1,357,132	+				-1.7
1,357,179	-				-1.6
1,357,208	-				+0.1
1,357,257	+				-1.5
1,357,257	-				+3.9
1,357,271	+				+0.1
1,357,277	+				-1.0
1,357,278	+				-0.9
1,357,286	-				+0.1
1,357,324	+				-1.5
1,357,343	+				+0.7
1,357,343	+				-2.2
1,357,343	+				-1.9
1,357,343	+				-0.1
1,357,351	-				+5.5
1,357,351	-				-0.6
1,357,351	-				+2.4
1,357,351	-				-0.9
1,357,359	+				+3.3
1,357,359	+				-1.5
1,357,359	+				-1.2
1,357,362	-				+0.7
1,357,367	-				-0.5
1,357,367	-				-0.9
1,357,367	-				-0.5
1,357,367	-				+0.1
1,357,367	-				-0.5
1,357,372	-				+0.1
1,357,378	-				-1.7
1,357,378	-				+2.9
1,357,397	-				-0.5
1,357,434	-				-0.9
1,357,434	-				-0.5
1,357,448	+				+1.1
1,357,449	-				-2.0
1,357,456	-				-1.2
1,357,456	-				-0.9
1,357,458	+				-0.9
1,357,490	-				+0.1
1,357,505	+				+0.3
1,357,528	+				+0.8
1,357,536	-				-2.6
1,357,536	-				-0.1
1,357,536	-				-0.3
1,357,540	+				-1.5
1,357,548	-				-1.5
1,357,588	-	mfd	Synpcc7942_1326	0.10	-0.7
1,357,607	+	mfd	Synpcc7942_1326	0.11	+2.5
1,357,628	+	mfd	Synpcc7942_1326	0.11	-2.3
1,357,663	-	mfd	Synpcc7942_1326	0.12	+2.1
1,357,663	-	mfd	Synpcc7942_1326	0.12	-2.3
1,357,676	-	mfd	Synpcc7942_1326	0.13	-1.7
1,357,683	+	mfd	Synpcc7942_1326	0.13	-2.0
1,357,683	-	mfd	Synpcc7942_1326	0.13	+1.6
1,357,711	+	mfd	Synpcc7942_1326	0.14	-1.9
1,357,711	+	mfd	Synpcc7942_1326	0.14	+2.2
1,357,715	+	mfd	Synpcc7942_1326	0.14	-0.9
1,357,719	-	mfd	Synpcc7942_1326	0.14	-1.7
1,357,719	-	mfd	Synpcc7942_1326	0.14	-1.9
1,357,726	+	mfd	Synpcc7942_1326	0.14	+1.6
1,357,731	+	mfd	Synpcc7942_1326	0.14	-2.3
1,357,732	-	mfd	Synpcc7942_1326	0.14	-0.5
1,357,748	+	mfd	Synpcc7942_1326	0.15	+1.0
1,357,750	+	mfd	Synpcc7942_1326	0.15	+1.1
1,357,781	+	mfd	Synpcc7942_1326	0.16	-0.9
1,357,835	-	mfd	Synpcc7942_1326	0.17	-1.9
1,357,844	+	mfd	Synpcc7942_1326	0.18	-2.3
1,357,899	+	mfd	Synpcc7942_1326	0.19	-1.2
1,357,899	+	mfd	Synpcc7942_1326	0.19	+4.2
1,357,899	+	mfd	Synpcc7942_1326	0.19	+1.1
1,357,900	-	mfd	Synpcc7942_1326	0.19	-2.0
1,357,900	-	mfd	Synpcc7942_1326	0.19	-1.7
1,357,900	-	mfd	Synpcc7942_1326	0.19	-0.5
1,357,905	-	mfd	Synpcc7942_1326	0.19	-1.2
1,357,912	-	mfd	Synpcc7942_1326	0.20	-0.5
1,357,913	+	mfd	Synpcc7942_1326	0.20	-0.2
1,357,913	+	mfd	Synpcc7942_1326	0.20	-1.7
1,357,929	+	mfd	Synpcc7942_1326	0.20	+0.8
1,357,929	+	mfd	Synpcc7942_1326	0.20	-0.9
1,357,955	+	mfd	Synpcc7942_1326	0.21	-2.3
1,357,963	-	mfd	Synpcc7942_1326	0.21	-0.5
1,357,966	+	mfd	Synpcc7942_1326	0.21	+0.5
1,358,039	+	mfd	Synpcc7942_1326	0.23	-1.7
1,358,068	+	mfd	Synpcc7942_1326	0.24	+2.1
1,358,076	-	mfd	Synpcc7942_1326	0.24	-0.9
1,358,113	-	mfd	Synpcc7942_1326	0.25	-1.2
1,358,146	+	mfd	Synpcc7942_1326	0.26	+0.6
1,358,147	+	mfd	Synpcc7942_1326	0.26	-2.3