Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1276

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,299,394	+		Synpcc7942_1275	0.18	+0.4
1,299,408	+		Synpcc7942_1275	0.19	+0.6
1,299,468	+		Synpcc7942_1275	0.24	+0.0
1,299,474	+		Synpcc7942_1275	0.25	+1.0
1,299,474	+				+2.6
1,299,474	+		Synpcc7942_1275	0.25	+0.0
1,299,476	-		Synpcc7942_1275	0.25	-1.6
1,299,476	-		Synpcc7942_1275	0.25	-1.6
1,299,536	+		Synpcc7942_1275	0.30	-2.6
1,299,558	-		Synpcc7942_1275	0.32	-0.6
1,299,578	-		Synpcc7942_1275	0.34	-1.0
1,299,603	+		Synpcc7942_1275	0.36	+0.8
1,299,661	+		Synpcc7942_1275	0.41	-1.6
1,299,669	-		Synpcc7942_1275	0.41	+0.0
1,299,678	+		Synpcc7942_1275	0.42	-0.6
1,299,704	-		Synpcc7942_1275	0.44	+0.6
1,299,756	+		Synpcc7942_1275	0.49	-1.8
1,299,764	-		Synpcc7942_1275	0.50	+0.4
1,299,811	+		Synpcc7942_1275	0.54	-0.6
1,299,830	-		Synpcc7942_1275	0.55	+1.4
1,299,844	+		Synpcc7942_1275	0.56	-1.0
1,299,844	+		Synpcc7942_1275	0.56	+0.0
1,299,852	-		Synpcc7942_1275	0.57	-1.3
1,299,875	-		Synpcc7942_1275	0.59	+1.0
1,299,893	+		Synpcc7942_1275	0.61	-1.0
1,299,900	+		Synpcc7942_1275	0.61	+3.6
1,299,901	-		Synpcc7942_1275	0.61	+0.5
1,299,904	+		Synpcc7942_1275	0.62	-1.0
1,299,909	-		Synpcc7942_1275	0.62	-1.1
1,299,914	-		Synpcc7942_1275	0.62	-2.3
1,299,916	+		Synpcc7942_1275	0.63	-2.0
1,299,924	-		Synpcc7942_1275	0.63	+2.8
1,299,924	-		Synpcc7942_1275	0.63	-1.5
1,299,924	-		Synpcc7942_1275	0.63	-0.6
1,299,966	+		Synpcc7942_1275	0.67	-0.8
1,299,987	+		Synpcc7942_1275	0.69	-1.3
1,299,990	-		Synpcc7942_1275	0.69	+0.0
1,299,990	-		Synpcc7942_1275	0.69	+1.9
1,299,998	-		Synpcc7942_1275	0.70	-2.5
1,300,031	+				+1.0
1,300,031	+		Synpcc7942_1275	0.73	+1.5
1,300,031	+		Synpcc7942_1275	0.73	+1.4
1,300,049	-		Synpcc7942_1275	0.74	+1.0
1,300,054	-		Synpcc7942_1275	0.74	-2.0
1,300,058	-		Synpcc7942_1275	0.75	-2.5
1,300,071	+		Synpcc7942_1275	0.76	-1.0
1,300,071	+		Synpcc7942_1275	0.76	+1.3
1,300,071	+		Synpcc7942_1275	0.76	+1.1
1,300,071	+		Synpcc7942_1275	0.76	+2.2
1,300,071	+		Synpcc7942_1275	0.76	+0.6
1,300,079	-		Synpcc7942_1275	0.77	+4.2
1,300,079	-		Synpcc7942_1275	0.77	+2.8
1,300,079	-		Synpcc7942_1275	0.77	-2.3
1,300,079	-		Synpcc7942_1275	0.77	-0.6
1,300,079	-		Synpcc7942_1275	0.77	-4.5
1,300,079	-		Synpcc7942_1275	0.77	-1.3
1,300,079	-		Synpcc7942_1275	0.77	-0.2
1,300,095	+		Synpcc7942_1275	0.78	+3.3
1,300,109	-		Synpcc7942_1275	0.79	+0.4
1,300,152	-		Synpcc7942_1275	0.83	-1.4
1,300,175	+		Synpcc7942_1275	0.85	-1.8
1,300,182	-				-1.0
1,300,187	+		Synpcc7942_1275	0.86	-1.0
1,300,189	+		Synpcc7942_1275	0.86	+0.2
1,300,189	-		Synpcc7942_1275	0.86	-2.3
1,300,195	-		Synpcc7942_1275	0.87	+5.0
1,300,195	-		Synpcc7942_1275	0.87	+1.6
1,300,195	-		Synpcc7942_1275	0.87	+0.4
1,300,200	+		Synpcc7942_1275	0.87	-0.3
1,300,200	+		Synpcc7942_1275	0.87	+2.3
1,300,208	-		Synpcc7942_1275	0.88	-0.6
1,300,208	-		Synpcc7942_1275	0.88	+2.5
1,300,208	-		Synpcc7942_1275	0.88	+0.8
1,300,246	+				+3.6
1,300,246	+				-1.3
1,300,254	-				-1.0
1,300,266	-				+1.7
1,300,282	+				-2.5
1,300,282	+				+0.0
1,300,282	+				+0.0
1,300,282	+				-0.7
1,300,282	+				-1.3
1,300,290	-				-1.8
1,300,319	-				+2.9
1,300,340	+				+1.2
1,300,340	-				-1.2
1,300,359	-				-1.5
1,300,359	-				-2.2
1,300,379	+				-2.2
1,300,379	+				-0.6
1,300,387	-				+1.0
1,300,406	+				+2.2
1,300,406	+				-1.1
1,300,417	+				-1.0
1,300,430	-				-1.2
1,300,440	-				+0.0
1,300,440	-				-1.0
1,300,471	+	gtrC	Synpcc7942_1276	0.11	-1.6
1,300,471	+	gtrC	Synpcc7942_1276	0.11	+0.0
1,300,471	+	gtrC	Synpcc7942_1276	0.11	+0.3
1,300,479	-	gtrC	Synpcc7942_1276	0.13	-2.8
1,300,479	-	gtrC	Synpcc7942_1276	0.13	-3.1
1,300,481	+	gtrC	Synpcc7942_1276	0.13	-1.6
1,300,481	+	gtrC	Synpcc7942_1276	0.13	-1.3
1,300,481	+	gtrC	Synpcc7942_1276	0.13	-2.2
1,300,481	+	gtrC	Synpcc7942_1276	0.13	+1.0
1,300,481	+	gtrC	Synpcc7942_1276	0.13	-2.8
1,300,482	-	gtrC	Synpcc7942_1276	0.13	+1.0
1,300,487	-	gtrC	Synpcc7942_1276	0.14	-0.6
1,300,489	-	gtrC	Synpcc7942_1276	0.14	-4.1
1,300,489	-				+0.0
1,300,489	-	gtrC	Synpcc7942_1276	0.14	+0.0
1,300,489	-	gtrC	Synpcc7942_1276	0.14	-2.0
1,300,489	-	gtrC	Synpcc7942_1276	0.14	-1.9
1,300,489	-	gtrC	Synpcc7942_1276	0.14	-1.7
1,300,489	-	gtrC	Synpcc7942_1276	0.14	-2.2
1,300,489	-	gtrC	Synpcc7942_1276	0.14	+0.9
1,300,489	-	gtrC	Synpcc7942_1276	0.14	-2.0
1,300,489	-	gtrC	Synpcc7942_1276	0.14	-2.2
1,300,551	+	gtrC	Synpcc7942_1276	0.22	-3.6
1,300,607	+	gtrC	Synpcc7942_1276	0.29	-2.9
1,300,609	+	gtrC	Synpcc7942_1276	0.29	+0.7
1,300,617	-	gtrC	Synpcc7942_1276	0.30	+0.4
1,300,673	-	gtrC	Synpcc7942_1276	0.37	-0.1
1,300,712	+	gtrC	Synpcc7942_1276	0.42	-0.6
1,300,718	-	gtrC	Synpcc7942_1276	0.43	+1.0
1,300,742	+	gtrC	Synpcc7942_1276	0.46	-2.6
1,300,742	+	gtrC	Synpcc7942_1276	0.46	+1.0
1,300,760	-	gtrC	Synpcc7942_1276	0.48	-1.8
1,300,783	+	gtrC	Synpcc7942_1276	0.51	-2.3
1,300,783	+	gtrC	Synpcc7942_1276	0.51	-2.0
1,300,831	+				+1.0
1,300,831	+	gtrC	Synpcc7942_1276	0.57	-0.6
1,300,831	+	gtrC	Synpcc7942_1276	0.57	-1.3
1,300,839	-	gtrC	Synpcc7942_1276	0.58	-1.3
1,300,887	-	gtrC	Synpcc7942_1276	0.65	+1.0
1,300,962	+	gtrC	Synpcc7942_1276	0.74	-1.0
1,300,963	+	gtrC	Synpcc7942_1276	0.74	-1.3
1,300,970	-				+1.6
1,301,005	+	gtrC	Synpcc7942_1276	0.80	-1.8
1,301,008	-	gtrC	Synpcc7942_1276	0.80	-1.8
1,301,037	+	gtrC	Synpcc7942_1276	0.84	+0.0
1,301,045	-	gtrC	Synpcc7942_1276	0.85	-2.0
1,301,200	-				-1.6
1,301,576	+				-1.3
1,301,816	+				+7.1
1,301,817	+				-1.6
1,301,817	+				-1.3
1,301,843	+		Synpcc7942_1279	0.19	-1.0
1,301,846	-		Synpcc7942_1279	0.20	-2.2
1,301,851	-		Synpcc7942_1279	0.22	-2.0
1,301,930	-		Synpcc7942_1279	0.53	-2.3
1,301,949	+		Synpcc7942_1279	0.61	+2.0
1,301,949	+		Synpcc7942_1279	0.61	-0.4
1,301,957	-		Synpcc7942_1279	0.64	+3.1
1,301,957	-		Synpcc7942_1279	0.64	+1.5
1,301,957	-		Synpcc7942_1279	0.64	+1.0
1,301,968	-		Synpcc7942_1279	0.68	+2.5
1,301,977	-		Synpcc7942_1279	0.72	+1.0
1,301,977	-		Synpcc7942_1279	0.72	+0.0
1,302,013	+		Synpcc7942_1279	0.86	+1.4
1,302,021	-		Synpcc7942_1279	0.89	-0.6
1,302,021	-		Synpcc7942_1279	0.89	+1.3
1,302,022	-				-1.3
1,302,026	+				-1.8
1,302,032	+				-1.0
1,302,032	+				+0.4
1,302,034	-				-1.0
1,302,072	-				-0.6
1,302,110	-				+1.3
1,302,112	+				-1.0
1,302,118	-				+2.0
1,302,124	+				-1.6
1,302,142	+				+1.6
1,302,142	+				-0.3
1,302,155	+		Synpcc7942_1280	0.10	-1.0