Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1264

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,286,941	-		Synpcc7942_1263	0.20	-1.8
1,286,943	+		Synpcc7942_1263	0.21	+0.3
1,286,956	-		Synpcc7942_1263	0.22	-0.5
1,286,996	-		Synpcc7942_1263	0.25	-2.0
1,287,001	+		Synpcc7942_1263	0.26	+1.8
1,287,021	+		Synpcc7942_1263	0.28	-0.2
1,287,074	-		Synpcc7942_1263	0.32	+2.3
1,287,081	+		Synpcc7942_1263	0.33	-0.0
1,287,085	+		Synpcc7942_1263	0.33	+2.2
1,287,088	-		Synpcc7942_1263	0.34	+2.4
1,287,101	+		Synpcc7942_1263	0.35	+1.0
1,287,101	+		Synpcc7942_1263	0.35	-0.0
1,287,109	-		Synpcc7942_1263	0.35	-1.3
1,287,139	+		Synpcc7942_1263	0.38	+1.6
1,287,179	+		Synpcc7942_1263	0.42	-0.0
1,287,179	+		Synpcc7942_1263	0.42	+4.6
1,287,193	-		Synpcc7942_1263	0.43	+1.0
1,287,206	+		Synpcc7942_1263	0.44	-0.6
1,287,211	+		Synpcc7942_1263	0.44	-0.6
1,287,248	-		Synpcc7942_1263	0.48	-0.3
1,287,252	+		Synpcc7942_1263	0.48	-0.9
1,287,278	+		Synpcc7942_1263	0.50	+1.8
1,287,280	-		Synpcc7942_1263	0.51	+1.0
1,287,303	-		Synpcc7942_1263	0.53	-2.0
1,287,342	-		Synpcc7942_1263	0.56	-1.3
1,287,356	+		Synpcc7942_1263	0.57	+1.3
1,287,356	+		Synpcc7942_1263	0.57	+0.3
1,287,364	-		Synpcc7942_1263	0.58	-2.0
1,287,367	+		Synpcc7942_1263	0.58	+1.0
1,287,375	-		Synpcc7942_1263	0.59	+0.6
1,287,384	-		Synpcc7942_1263	0.60	-2.2
1,287,385	-		Synpcc7942_1263	0.60	-1.2
1,287,385	-		Synpcc7942_1263	0.60	-0.6
1,287,398	+		Synpcc7942_1263	0.61	-1.8
1,287,406	-		Synpcc7942_1263	0.62	-3.1
1,287,408	-		Synpcc7942_1263	0.62	-1.6
1,287,427	+		Synpcc7942_1263	0.64	-0.6
1,287,478	+		Synpcc7942_1263	0.68	-0.2
1,287,524	-		Synpcc7942_1263	0.72	-0.0
1,287,540	+		Synpcc7942_1263	0.74	+2.8
1,287,540	+		Synpcc7942_1263	0.74	+2.5
1,287,654	+		Synpcc7942_1263	0.84	-1.3
1,287,674	-		Synpcc7942_1263	0.86	-3.0
1,287,689	+		Synpcc7942_1263	0.87	+3.2
1,287,699	+		Synpcc7942_1263	0.88	-0.6
1,287,704	-		Synpcc7942_1263	0.88	-1.6
1,287,707	-		Synpcc7942_1263	0.89	-0.6
1,287,763	+				+3.5
1,287,764	-				+1.4
1,287,770	-				-0.5
1,287,770	-				+2.0
1,287,772	+				-0.9
1,287,780	-				-1.9
1,287,780	-				+1.0
1,287,787	-				+2.0
1,287,803	-				+1.4
1,287,856	-				+2.7
1,287,865	+				-1.3
1,287,865	+				+3.7
1,287,873	-				-1.3
1,287,881	+				-1.3
1,287,891	+				-0.0
1,287,919	-				-1.3
1,287,949	+				+0.7
1,287,957	-				-0.3
1,287,968	+				+1.7
1,287,968	-				+2.0
1,288,004	+				+1.0
1,288,016	+				-0.8
1,288,016	+				-0.0
1,288,021	+				-0.6
1,288,028	+				-0.1
1,288,028	+				-0.6
1,288,029	+				-2.0
1,288,037	-				-0.3
1,288,044	+				-2.6
1,288,079	+				-1.0
1,288,086	+				-3.0
1,288,117	+	nha2	Synpcc7942_1264	0.11	-1.1
1,288,119	+	nha2	Synpcc7942_1264	0.11	-1.6
1,288,126	+	nha2	Synpcc7942_1264	0.11	+0.0
1,288,131	+	nha2	Synpcc7942_1264	0.12	-0.6
1,288,139	-	nha2	Synpcc7942_1264	0.12	-1.6
1,288,164	-	nha2	Synpcc7942_1264	0.14	+0.2
1,288,171	-	nha2	Synpcc7942_1264	0.14	-2.3
1,288,171	-	nha2	Synpcc7942_1264	0.14	-2.5
1,288,239	+	nha2	Synpcc7942_1264	0.18	-1.8
1,288,248	+	nha2	Synpcc7942_1264	0.19	-2.3
1,288,273	+	nha2	Synpcc7942_1264	0.20	-1.8
1,288,276	-	nha2	Synpcc7942_1264	0.20	-2.5
1,288,281	-	nha2	Synpcc7942_1264	0.21	-3.2
1,288,286	-	nha2	Synpcc7942_1264	0.21	-1.0
1,288,304	+	nha2	Synpcc7942_1264	0.22	-1.8
1,288,398	-	nha2	Synpcc7942_1264	0.28	-0.5
1,288,458	-	nha2	Synpcc7942_1264	0.32	-1.8
1,288,468	-	nha2	Synpcc7942_1264	0.32	+0.0
1,288,506	-	nha2	Synpcc7942_1264	0.34	-2.8
1,288,531	-	nha2	Synpcc7942_1264	0.36	-0.3
1,288,541	-	nha2	Synpcc7942_1264	0.37	-1.0
1,288,550	+	nha2	Synpcc7942_1264	0.37	-1.2
1,288,558	-	nha2	Synpcc7942_1264	0.38	-1.0
1,288,559	+	nha2	Synpcc7942_1264	0.38	+1.0
1,288,572	-	nha2	Synpcc7942_1264	0.39	-0.6
1,288,640	-	nha2	Synpcc7942_1264	0.43	-3.4
1,288,661	-	nha2	Synpcc7942_1264	0.44	+0.0
1,288,688	-	nha2	Synpcc7942_1264	0.46	+1.0
1,288,715	+	nha2	Synpcc7942_1264	0.47	-1.6
1,288,725	+	nha2	Synpcc7942_1264	0.48	-1.0
1,288,725	+	nha2	Synpcc7942_1264	0.48	+1.0
1,288,728	-	nha2	Synpcc7942_1264	0.48	+1.0
1,288,754	+	nha2	Synpcc7942_1264	0.50	-1.3
1,288,782	-	nha2	Synpcc7942_1264	0.51	+1.0
1,288,796	+	nha2	Synpcc7942_1264	0.52	+0.2
1,288,804	-	nha2	Synpcc7942_1264	0.53	-1.3
1,288,804	-	nha2	Synpcc7942_1264	0.53	-2.7
1,288,856	+	nha2	Synpcc7942_1264	0.56	-2.2
1,288,857	-	nha2	Synpcc7942_1264	0.56	-0.4
1,288,864	-	nha2	Synpcc7942_1264	0.56	+0.1
1,288,885	+	nha2	Synpcc7942_1264	0.58	+4.5
1,288,893	-	nha2	Synpcc7942_1264	0.58	-0.3
1,288,893	-	nha2	Synpcc7942_1264	0.58	-2.6
1,288,949	+	nha2	Synpcc7942_1264	0.61	-1.0
1,288,949	+	nha2	Synpcc7942_1264	0.61	-2.5
1,288,974	+	nha2	Synpcc7942_1264	0.63	-0.6
1,288,975	-	nha2	Synpcc7942_1264	0.63	-1.8
1,288,981	-	nha2	Synpcc7942_1264	0.63	+0.2
1,289,002	-	nha2	Synpcc7942_1264	0.65	-1.0
1,289,020	-	nha2	Synpcc7942_1264	0.66	-2.0
1,289,020	-	nha2	Synpcc7942_1264	0.66	-1.3
1,289,029	-	nha2	Synpcc7942_1264	0.66	-1.1
1,289,054	+	nha2	Synpcc7942_1264	0.68	-1.0
1,289,054	+	nha2	Synpcc7942_1264	0.68	-3.5
1,289,062	-	nha2	Synpcc7942_1264	0.68	-1.8
1,289,062	-	nha2	Synpcc7942_1264	0.68	-1.3
1,289,087	+	nha2	Synpcc7942_1264	0.70	+0.0
1,289,095	-	nha2	Synpcc7942_1264	0.70	-2.3
1,289,100	+	nha2	Synpcc7942_1264	0.71	-3.6
1,289,118	+	nha2	Synpcc7942_1264	0.72	-2.7
1,289,118	+	nha2	Synpcc7942_1264	0.72	+2.8
1,289,123	+	nha2	Synpcc7942_1264	0.72	-2.7
1,289,133	+	nha2	Synpcc7942_1264	0.73	+0.2
1,289,140	-	nha2	Synpcc7942_1264	0.73	+1.0
1,289,150	+	nha2	Synpcc7942_1264	0.74	-1.0
1,289,153	+	nha2	Synpcc7942_1264	0.74	-1.6
1,289,153	-	nha2	Synpcc7942_1264	0.74	-1.0
1,289,153	-	nha2	Synpcc7942_1264	0.74	+2.1
1,289,161	-	nha2	Synpcc7942_1264	0.74	-1.1
1,289,161	-	nha2	Synpcc7942_1264	0.74	-2.2
1,289,163	+	nha2	Synpcc7942_1264	0.74	-1.3
1,289,163	+	nha2	Synpcc7942_1264	0.74	-1.8
1,289,180	+	nha2	Synpcc7942_1264	0.75	-2.6
1,289,193	-	nha2	Synpcc7942_1264	0.76	-1.0
1,289,196	+	nha2	Synpcc7942_1264	0.76	-3.5
1,289,241	-	nha2	Synpcc7942_1264	0.79	-0.6
1,289,250	+	nha2	Synpcc7942_1264	0.80	+1.2
1,289,266	+	nha2	Synpcc7942_1264	0.81	-2.5
1,289,294	-	nha2	Synpcc7942_1264	0.82	-0.6
1,289,295	-	nha2	Synpcc7942_1264	0.82	-0.8
1,289,302	-	nha2	Synpcc7942_1264	0.83	-1.3
1,289,310	+	nha2	Synpcc7942_1264	0.83	-2.3
1,289,310	-	nha2	Synpcc7942_1264	0.83	-1.0
1,289,315	+	nha2	Synpcc7942_1264	0.84	+0.0
1,289,315	+	nha2	Synpcc7942_1264	0.84	-1.0
1,289,318	-	nha2	Synpcc7942_1264	0.84	-0.6
1,289,318	-	nha2	Synpcc7942_1264	0.84	+0.0
1,289,323	-	nha2	Synpcc7942_1264	0.84	-1.8
1,289,347	+	nha2	Synpcc7942_1264	0.86	-1.0
1,289,399	-	nha2	Synpcc7942_1264	0.89	+2.0
1,289,407	+	nha2	Synpcc7942_1264	0.89	-0.6
1,289,407	+	nha2	Synpcc7942_1264	0.89	-1.5
1,289,415	+	nha2	Synpcc7942_1264	0.90	+0.6
1,289,448	+				-2.0
1,289,507	+				-0.2
1,289,543	+				-2.9
1,289,567	-				+1.9
1,289,584	-				-1.3
1,289,584	-				+1.2
1,289,588	-				+1.8
1,289,611	+				-1.3
1,289,611	+				-1.0
1,289,619	-		Synpcc7942_1265	0.10	+2.0
1,289,620	-		Synpcc7942_1265	0.11	+0.3
1,289,622	+		Synpcc7942_1265	0.11	-1.0
1,289,626	+		Synpcc7942_1265	0.11	+1.8
1,289,671	-				-1.3
1,289,686	+		Synpcc7942_1265	0.20	-1.3
1,289,686	+		Synpcc7942_1265	0.20	-2.3
1,289,696	+		Synpcc7942_1265	0.21	-2.3
1,289,696	+		Synpcc7942_1265	0.21	-2.2
1,289,704	-		Synpcc7942_1265	0.22	-0.0
1,289,710	-		Synpcc7942_1265	0.23	-0.0
1,289,727	+		Synpcc7942_1265	0.25	-2.0
1,289,743	+		Synpcc7942_1265	0.28	-1.0
1,289,744	+		Synpcc7942_1265	0.28	-3.6
1,289,751	-		Synpcc7942_1265	0.29	-1.3
1,289,795	-		Synpcc7942_1265	0.35	-0.6
1,289,830	-		Synpcc7942_1265	0.40	-0.0
1,289,832	+		Synpcc7942_1265	0.40	+1.8
1,289,832	+		Synpcc7942_1265	0.40	-0.6
1,289,840	-		Synpcc7942_1265	0.41	+1.0
1,289,914	+		Synpcc7942_1265	0.52	-1.0
1,289,927	-		Synpcc7942_1265	0.54	-3.3
1,289,932	-		Synpcc7942_1265	0.54	-1.0
1,289,935	-		Synpcc7942_1265	0.55	-2.7
1,289,998	-		Synpcc7942_1265	0.63	-0.8
1,290,000	+		Synpcc7942_1265	0.64	-3.6
1,290,045	-		Synpcc7942_1265	0.70	-2.0
1,290,050	-		Synpcc7942_1265	0.71	-0.0
1,290,055	-		Synpcc7942_1265	0.71	+0.6
1,290,125	+		Synpcc7942_1265	0.81	+1.5
1,290,125	+		Synpcc7942_1265	0.81	+0.5
1,290,125	+		Synpcc7942_1265	0.81	-2.7
1,290,126	-		Synpcc7942_1265	0.81	-0.6
1,290,133	-		Synpcc7942_1265	0.82	-1.5
1,290,152	-		Synpcc7942_1265	0.85	-0.0
1,290,164	-		Synpcc7942_1265	0.87	+1.0
1,290,196	+				-0.6
1,290,204	-				-0.7
1,290,211	+				-1.8
1,290,257	-				-1.6
1,290,311	+				-0.6
1,290,320	-				+1.5
1,290,325	+				+0.0
1,290,358	+				-1.0
1,290,358	+				-0.6
1,290,358	+				-1.6
1,290,358	+				+1.2
1,290,358	+				-0.6
1,290,358	+				-1.6
1,290,358	+				+0.0
1,290,363	+				-1.0
1,290,366	-				-1.6
1,290,366	-				-1.6
1,290,366	-				+0.3
1,290,366	-				-0.6
1,290,366	-				-1.0
1,290,366	-				+0.0
1,290,366	-				-2.3
1,290,366	-				-1.6
1,290,366	-				+0.4
1,290,366	-				-1.3
1,290,366	-				-0.6
1,290,375	+				-2.9
1,290,411	-				-1.2
1,290,447	-	rdgB	Synpcc7942_1266	0.15	-1.2
1,290,457	+	rdgB	Synpcc7942_1266	0.16	-2.3
1,290,465	-	rdgB	Synpcc7942_1266	0.18	-1.8
1,290,467	+	rdgB	Synpcc7942_1266	0.18	-0.3
1,290,475	-	rdgB	Synpcc7942_1266	0.19	-0.1
1,290,480	-	rdgB	Synpcc7942_1266	0.20	-1.2
1,290,498	+	rdgB	Synpcc7942_1266	0.23	-2.0
1,290,500	+	rdgB	Synpcc7942_1266	0.24	-3.1
1,290,531	+	rdgB	Synpcc7942_1266	0.29	+1.0
1,290,531	+	rdgB	Synpcc7942_1266	0.29	-5.1
1,290,538	+	rdgB	Synpcc7942_1266	0.30	+1.4
1,290,539	-	rdgB	Synpcc7942_1266	0.30	+2.0
1,290,548	-	rdgB	Synpcc7942_1266	0.32	-1.8