Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1192

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,220,019	-	lap	Synpcc7942_1190	0.89	+0.0
1,220,021	+	lap	Synpcc7942_1190	0.89	-1.0
1,220,068	+				-0.6
1,220,098	-				+0.4
1,220,112	+				-3.9
1,220,113	-				-1.0
1,220,120	-				-3.1
1,220,123	+				-0.6
1,220,124	+				-2.3
1,220,131	-				-0.3
1,220,131	-				-0.6
1,220,137	-				+2.8
1,220,140	+				-2.9
1,220,143	-				-2.2
1,220,144	+				-3.3
1,220,145	+				+0.0
1,220,154	-				-2.2
1,220,154	-				-0.8
1,220,154	-				+2.6
1,220,214	-				-1.0
1,220,218	+				-2.6
1,220,220	+				-0.6
1,220,225	+				-1.3
1,220,233	-				-2.6
1,220,248	+				-1.6
1,220,248	+				+1.0
1,220,254	-				-0.6
1,220,265	+				-0.6
1,220,270	+				+3.5
1,220,278	-				+1.4
1,220,278	-				-2.2
1,220,282	+				+1.9
1,220,286	+				-1.3
1,220,297	-				-2.6
1,220,308	+				-0.6
1,220,316	-				-1.8
1,220,316	-				+0.0
1,220,933	+				-1.0
1,220,940	-				+0.0
1,220,962	-				-0.1
1,221,020	+				-3.2
1,221,059	-		Synpcc7942_1192	0.12	-2.0
1,221,061	+		Synpcc7942_1192	0.12	-0.6
1,221,102	+		Synpcc7942_1192	0.19	-0.6
1,221,122	-		Synpcc7942_1192	0.22	-2.5
1,221,122	-		Synpcc7942_1192	0.22	-2.3
1,221,157	+		Synpcc7942_1192	0.28	-3.3
1,221,165	-		Synpcc7942_1192	0.29	-2.2
1,221,202	+		Synpcc7942_1192	0.36	-4.2
1,221,215	-		Synpcc7942_1192	0.38	+0.0
1,221,232	-		Synpcc7942_1192	0.41	+0.0
1,221,245	+		Synpcc7942_1192	0.43	-0.6
1,221,245	+		Synpcc7942_1192	0.43	-1.3
1,221,250	+		Synpcc7942_1192	0.44	-2.6
1,221,253	-		Synpcc7942_1192	0.44	-1.8
1,221,253	-		Synpcc7942_1192	0.44	-1.3
1,221,253	-		Synpcc7942_1192	0.44	-2.3
1,221,253	-		Synpcc7942_1192	0.44	-2.2
1,221,253	-		Synpcc7942_1192	0.44	-1.3
1,221,317	+		Synpcc7942_1192	0.55	-4.5
1,221,317	+		Synpcc7942_1192	0.55	-2.5
1,221,325	-		Synpcc7942_1192	0.56	-1.3
1,221,390	+		Synpcc7942_1192	0.67	-2.5
1,221,403	-		Synpcc7942_1192	0.70	-2.5
1,221,495	+		Synpcc7942_1192	0.85	-3.1
1,221,498	+		Synpcc7942_1192	0.86	+0.0
1,221,512	-		Synpcc7942_1192	0.88	-1.3
1,221,551	-				-3.0
1,221,626	-				-5.1
1,221,673	+				-2.5
1,221,673	+				-3.0
1,221,673	+				+0.4
1,221,674	+				-3.1
1,221,681	-				+1.2
1,221,681	-				-2.2
1,221,681	-				-1.2
1,221,681	-				-3.1
1,221,682	-				-1.3
1,221,736	+				-1.8
1,221,750	+		Synpcc7942_1193	0.10	-2.7
1,221,763	-		Synpcc7942_1193	0.12	-1.3
1,222,417	-				+3.8
1,222,420	+				-1.6
1,222,420	+				-3.3
1,222,427	-				-0.8
1,222,440	+				-4.0
1,222,440	+				-1.3
1,222,448	-				-4.0
1,222,448	-				-1.0
1,222,451	+				-1.8
1,222,467	+				+0.0
1,222,467	-				-1.3
1,222,485	+				+1.0
1,222,485	+				-2.4
1,222,537	+				-1.3
1,222,542	+				-1.3
1,222,542	+				+2.6
1,222,545	-				+1.0
1,222,545	-				-2.8
1,222,551	-				-0.6
1,222,551	-				+2.3
1,222,577	+				-3.1
1,222,577	+				+3.2