Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1145

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,170,421	-				-3.3
1,170,428	+				-2.8
1,170,438	-				-0.2
1,170,448	+				-0.6
1,170,460	-				-0.5
1,170,462	+				+1.0
1,170,482	-				-0.0
1,170,492	-				-0.0
1,170,502	-				-2.5
1,170,554	-				-0.0
1,170,566	-				+3.3
1,170,566	-				-1.6
1,170,584	-				+2.0
1,170,594	+				-2.0
1,170,604	+				-0.0
1,170,612	-				-0.6
1,170,618	+				-1.5
1,170,622	-				+1.9
1,170,623	+				-1.0
1,170,687	-				+3.5
1,170,802	-				+2.3
1,170,824	+				-2.9
1,170,824	+				+2.0
1,170,827	-				+1.0
1,170,832	-				-1.8
1,170,840	+				-2.3
1,170,840	+				-1.3
1,170,853	+				-2.7
1,170,868	-				-2.8
1,170,880	+		Synpcc7942_1145	0.11	-0.2
1,170,942	+		Synpcc7942_1145	0.30	-3.6
1,170,944	-		Synpcc7942_1145	0.31	-3.2
1,170,945	-		Synpcc7942_1145	0.31	+1.0
1,170,945	-		Synpcc7942_1145	0.31	-2.6
1,170,958	-		Synpcc7942_1145	0.35	-2.3
1,171,020	+		Synpcc7942_1145	0.54	-1.8
1,171,020	+		Synpcc7942_1145	0.54	-3.5
1,171,031	+		Synpcc7942_1145	0.57	-0.0
1,171,031	+		Synpcc7942_1145	0.57	-1.0
1,171,040	-		Synpcc7942_1145	0.60	-1.6
1,171,213	+				+0.4
1,171,213	+				-0.2
1,171,213	+				+1.0
1,171,213	+				+3.8
1,171,213	+				-1.5
1,171,221	-				+0.0
1,171,223	+				-1.6
1,171,247	+		Synpcc7942_1146	0.12	-1.0
1,171,247	+		Synpcc7942_1146	0.12	-0.8
1,171,248	+		Synpcc7942_1146	0.12	+1.2
1,171,255	-		Synpcc7942_1146	0.15	-2.9
1,171,255	-		Synpcc7942_1146	0.15	+0.7
1,171,296	+		Synpcc7942_1146	0.30	-2.6
1,171,304	-		Synpcc7942_1146	0.33	-2.3
1,171,335	-		Synpcc7942_1146	0.45	-3.3
1,171,380	-		Synpcc7942_1146	0.62	-4.5
1,171,381	-		Synpcc7942_1146	0.62	+0.4
1,171,381	-		Synpcc7942_1146	0.62	-2.5
1,171,413	+		Synpcc7942_1146	0.74	-3.0
1,171,413	+		Synpcc7942_1146	0.74	-3.1
1,171,449	+		Synpcc7942_1146	0.88	-3.6
1,171,457	+				-2.0
1,171,459	-				-2.6
1,171,519	+				-1.5
1,171,554	+				+0.3
1,171,554	+				-2.0
1,171,554	+				-1.2
1,171,568	+				-1.0
1,171,569	+				+0.5
1,171,569	-				+1.7
1,171,570	-				-2.9
1,171,576	-				-0.1
1,171,582	+				+0.8
1,171,591	+				-1.3
1,171,592	+				+2.2
1,171,600	-				-1.0
1,171,600	-				+2.7
1,171,631	+				+1.3
1,171,696	+		Synpcc7942_1147	0.18	+0.6
1,171,696	+		Synpcc7942_1147	0.18	+1.1
1,171,704	-		Synpcc7942_1147	0.19	-2.8
1,171,704	-		Synpcc7942_1147	0.19	-1.3
1,171,704	-		Synpcc7942_1147	0.19	+0.8
1,171,737	+		Synpcc7942_1147	0.23	-0.6
1,171,750	+		Synpcc7942_1147	0.25	-2.5
1,171,758	-		Synpcc7942_1147	0.26	+3.4
1,171,768	+		Synpcc7942_1147	0.28	-3.3
1,171,768	+		Synpcc7942_1147	0.28	-2.3
1,171,768	+		Synpcc7942_1147	0.28	-1.8
1,171,776	-		Synpcc7942_1147	0.29	-1.3
1,171,776	-		Synpcc7942_1147	0.29	-0.4
1,171,776	-		Synpcc7942_1147	0.29	+0.7
1,171,818	+		Synpcc7942_1147	0.35	-1.0
1,171,828	+		Synpcc7942_1147	0.36	+4.2
1,171,836	-		Synpcc7942_1147	0.37	-0.0
1,171,836	-		Synpcc7942_1147	0.37	+0.5
1,171,921	-		Synpcc7942_1147	0.49	-0.8
1,171,952	+		Synpcc7942_1147	0.54	-1.0
1,171,983	-		Synpcc7942_1147	0.58	-1.3
1,171,986	+		Synpcc7942_1147	0.59	+3.2
1,172,003	+		Synpcc7942_1147	0.61	+1.0
1,172,007	+		Synpcc7942_1147	0.62	-1.0
1,172,011	-		Synpcc7942_1147	0.62	+2.1
1,172,032	-		Synpcc7942_1147	0.65	+3.7
1,172,050	+		Synpcc7942_1147	0.68	-0.6
1,172,127	+		Synpcc7942_1147	0.79	+3.9
1,172,127	+		Synpcc7942_1147	0.79	-2.7
1,172,130	+		Synpcc7942_1147	0.79	+1.3
1,172,140	+		Synpcc7942_1147	0.80	-1.6
1,172,150	+		Synpcc7942_1147	0.82	+0.3
1,172,158	-		Synpcc7942_1147	0.83	-1.8
1,172,163	+		Synpcc7942_1147	0.84	-2.7
1,172,163	+		Synpcc7942_1147	0.84	-1.0