Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1135

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,156,445	+				-3.0
1,156,453	-				-2.5
1,156,453	-				-2.9
1,156,453	-				+2.1
1,156,521	-				+3.0
1,156,534	-				-1.8
1,156,606	+				-0.9
1,156,649	+				+1.5
1,156,739	-				-2.7
1,156,745	+				-3.3
1,156,746	+				-1.1
1,156,765	+				+0.8
1,156,783	-				+0.6
1,156,873	-				-1.3
1,156,879	-				+1.0
1,156,894	+				-2.3
1,156,912	+				+0.5
1,156,936	-				-0.1
1,157,143	-				-0.6
1,157,401	+				+2.5
1,157,401	+				+1.4
1,157,409	-				+0.9
1,157,409	-				-0.0
1,157,419	-				-2.2
1,157,445	+				-1.0
1,157,445	-				-0.6
1,157,451	+				+1.2
1,157,453	-				-2.2
1,157,456	+				-0.6
1,157,461	+				+1.0
1,157,461	+				-1.5
1,157,469	-		Synpcc7942_1135	0.11	+0.3
1,157,493	+		Synpcc7942_1135	0.15	-3.0
1,157,498	-		Synpcc7942_1135	0.16	+3.8
1,157,501	-		Synpcc7942_1135	0.17	+1.4
1,157,514	+		Synpcc7942_1135	0.19	+1.7
1,157,520	+		Synpcc7942_1135	0.21	-0.0
1,157,520	+		Synpcc7942_1135	0.21	-1.6
1,157,520	+		Synpcc7942_1135	0.21	+2.0
1,157,520	+		Synpcc7942_1135	0.21	+0.6
1,157,520	+		Synpcc7942_1135	0.21	+0.2
1,157,520	+		Synpcc7942_1135	0.21	-1.3
1,157,520	+		Synpcc7942_1135	0.21	-1.8
1,157,520	+		Synpcc7942_1135	0.21	-1.3
1,157,522	-		Synpcc7942_1135	0.21	+3.3
1,157,525	+		Synpcc7942_1135	0.22	-2.0
1,157,528	-		Synpcc7942_1135	0.22	-0.6
1,157,528	-		Synpcc7942_1135	0.22	+3.0
1,157,528	-		Synpcc7942_1135	0.22	+3.0
1,157,563	-		Synpcc7942_1135	0.29	-1.3
1,157,600	+		Synpcc7942_1135	0.36	-0.8
1,157,600	+		Synpcc7942_1135	0.36	+2.4
1,157,608	-		Synpcc7942_1135	0.38	-0.6
1,157,608	-		Synpcc7942_1135	0.38	-0.6
1,157,612	+		Synpcc7942_1135	0.38	-1.6
1,157,620	-		Synpcc7942_1135	0.40	+0.6
1,157,622	+		Synpcc7942_1135	0.40	-2.6
1,157,622	+		Synpcc7942_1135	0.40	-0.0
1,157,637	+		Synpcc7942_1135	0.43	-1.0
1,157,657	-		Synpcc7942_1135	0.47	-2.3
1,157,657	-		Synpcc7942_1135	0.47	-3.1
1,157,683	+		Synpcc7942_1135	0.52	+2.8
1,157,709	+		Synpcc7942_1135	0.57	-2.3
1,157,714	+		Synpcc7942_1135	0.58	-2.2
1,157,714	+		Synpcc7942_1135	0.58	-2.6
1,157,714	+		Synpcc7942_1135	0.58	+2.8
1,157,775	-		Synpcc7942_1135	0.70	-0.0
1,157,776	-		Synpcc7942_1135	0.70	-0.2
1,157,807	+		Synpcc7942_1135	0.76	+1.0
1,157,807	+		Synpcc7942_1135	0.76	-1.6
1,157,807	+		Synpcc7942_1135	0.76	+2.3
1,157,807	+		Synpcc7942_1135	0.76	+1.6
1,157,807	+		Synpcc7942_1135	0.76	-0.7
1,157,808	-		Synpcc7942_1135	0.76	-0.8
1,157,813	-		Synpcc7942_1135	0.77	+2.0
1,157,813	-		Synpcc7942_1135	0.77	-0.3
1,157,815	-		Synpcc7942_1135	0.77	-0.5
1,157,815	-		Synpcc7942_1135	0.77	+1.4
1,157,815	-		Synpcc7942_1135	0.77	-2.8
1,157,815	-		Synpcc7942_1135	0.77	-0.8
1,157,817	+		Synpcc7942_1135	0.78	-0.0
1,157,850	+		Synpcc7942_1135	0.84	+1.0
1,157,893	-				-3.0
1,157,938	-				-1.2
1,157,941	+				-3.4
1,157,956	+				+2.8
1,157,963	+				+1.0
1,157,971	-				-0.6
1,157,979	-				+1.2
1,157,979	-				+0.7
1,157,991	-				-0.0
1,157,995	-				+4.4
1,158,003	-				+2.0
1,158,016	-				-1.8
1,158,030	-				-1.0
1,158,031	+				-1.2
1,158,058	+				-1.8
1,158,066	-				+0.3
1,158,066	-				+1.6
1,158,082	+				-1.9
1,158,082	+				-3.0
1,158,092	+				+1.8
1,158,092	+				-1.8
1,158,105	-				-0.0
1,158,150	-				-2.2
1,158,193	+				-1.5
1,158,201	-				-2.7
1,158,206	+				-1.0
1,158,206	+				-1.7
1,158,214	-				+1.1
1,158,214	-				-3.3
1,158,226	+				+1.0
1,158,227	+				-1.3
1,158,263	+				-3.3
1,158,271	-				-0.0
1,158,280	-				+3.4
1,158,280	-				-1.0
1,158,280	-				-2.9
1,158,316	-	pepN	Synpcc7942_1136	0.11	+2.9
1,158,318	-	pepN	Synpcc7942_1136	0.11	-0.0
1,158,343	+	pepN	Synpcc7942_1136	0.12	-1.0
1,158,352	-	pepN	Synpcc7942_1136	0.13	+1.0
1,158,368	+	pepN	Synpcc7942_1136	0.13	-1.0
1,158,420	-	pepN	Synpcc7942_1136	0.15	-2.8
1,158,420	-	pepN	Synpcc7942_1136	0.15	+1.7
1,158,420	-	pepN	Synpcc7942_1136	0.15	-1.8
1,158,422	+	pepN	Synpcc7942_1136	0.15	-0.1
1,158,436	+	pepN	Synpcc7942_1136	0.16	+1.0
1,158,439	-	pepN	Synpcc7942_1136	0.16	-1.9
1,158,455	+	pepN	Synpcc7942_1136	0.16	-0.0
1,158,455	+	pepN	Synpcc7942_1136	0.16	-1.3
1,158,455	+	pepN	Synpcc7942_1136	0.16	-1.6
1,158,458	-	pepN	Synpcc7942_1136	0.17	-1.8
1,158,463	-	pepN	Synpcc7942_1136	0.17	+1.7
1,158,463	-	pepN	Synpcc7942_1136	0.17	-0.0
1,158,463	-	pepN	Synpcc7942_1136	0.17	+6.4
1,158,463	-	pepN	Synpcc7942_1136	0.17	+2.1
1,158,467	+	pepN	Synpcc7942_1136	0.17	-2.3
1,158,474	+	pepN	Synpcc7942_1136	0.17	-0.6
1,158,482	-	pepN	Synpcc7942_1136	0.18	+3.7
1,158,488	-	pepN	Synpcc7942_1136	0.18	+1.7
1,158,511	+				+2.0
1,158,519	-	pepN	Synpcc7942_1136	0.19	-0.0
1,158,551	+	pepN	Synpcc7942_1136	0.20	+0.6
1,158,551	+	pepN	Synpcc7942_1136	0.20	+1.4
1,158,551	+	pepN	Synpcc7942_1136	0.20	+1.0
1,158,551	+	pepN	Synpcc7942_1136	0.20	+2.9
1,158,551	+	pepN	Synpcc7942_1136	0.20	+1.5
1,158,559	-	pepN	Synpcc7942_1136	0.20	+1.0
1,158,559	-	pepN	Synpcc7942_1136	0.20	-3.8
1,158,641	+	pepN	Synpcc7942_1136	0.24	-0.0
1,158,642	-	pepN	Synpcc7942_1136	0.24	+2.6
1,158,664	+	pepN	Synpcc7942_1136	0.25	+3.2
1,158,664	+	pepN	Synpcc7942_1136	0.25	+0.4
1,158,695	-	pepN	Synpcc7942_1136	0.26	+3.0
1,158,717	-	pepN	Synpcc7942_1136	0.27	+5.5
1,158,747	+	pepN	Synpcc7942_1136	0.28	-1.8
1,158,761	-	pepN	Synpcc7942_1136	0.28	-0.0
1,158,775	-	pepN	Synpcc7942_1136	0.29	+2.5
1,158,805	+	pepN	Synpcc7942_1136	0.30	-1.0
1,158,816	+	pepN	Synpcc7942_1136	0.30	-1.6
1,158,824	-	pepN	Synpcc7942_1136	0.31	+1.6
1,158,831	-	pepN	Synpcc7942_1136	0.31	-0.6
1,158,837	+	pepN	Synpcc7942_1136	0.31	-1.6
1,158,837	+	pepN	Synpcc7942_1136	0.31	-1.8
1,158,837	+	pepN	Synpcc7942_1136	0.31	-1.9
1,158,837	+	pepN	Synpcc7942_1136	0.31	+0.7
1,158,842	+	pepN	Synpcc7942_1136	0.31	+2.4
1,158,845	-	pepN	Synpcc7942_1136	0.31	-1.0
1,158,845	-	pepN	Synpcc7942_1136	0.31	+2.2
1,158,847	+	pepN	Synpcc7942_1136	0.32	+1.0
1,158,849	+	pepN	Synpcc7942_1136	0.32	-0.0
1,158,855	-	pepN	Synpcc7942_1136	0.32	+4.3
1,158,871	+	pepN	Synpcc7942_1136	0.32	+4.5
1,158,893	+	pepN	Synpcc7942_1136	0.33	-1.6
1,158,894	+	pepN	Synpcc7942_1136	0.33	-1.3
1,158,894	+	pepN	Synpcc7942_1136	0.33	-0.5
1,158,894	+	pepN	Synpcc7942_1136	0.33	-0.0
1,158,894	+	pepN	Synpcc7942_1136	0.33	-1.0
1,158,894	+	pepN	Synpcc7942_1136	0.33	+1.3