Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1100

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,116,116	-		Synpcc7942_1098	0.88	-2.3
1,116,139	+				+1.0
1,116,147	-				-0.0
1,116,231	+				+1.0
1,116,231	+				-2.2
1,116,231	+				-0.3
1,116,231	+				-0.6
1,116,231	+				-0.0
1,116,266	+				-2.0
1,116,273	+				-1.0
1,116,280	+				-1.0
1,116,290	+				-1.8
1,116,293	-				-3.1
1,116,298	-				-2.2
1,116,298	-				-3.4
1,116,318	-				-0.6
1,116,353	+	ubiE	Synpcc7942_1099	0.13	-0.6
1,116,360	+	ubiE	Synpcc7942_1099	0.14	-3.4
1,116,365	+	ubiE	Synpcc7942_1099	0.15	-3.9
1,116,369	-	ubiE	Synpcc7942_1099	0.15	-2.0
1,116,382	-	ubiE	Synpcc7942_1099	0.17	-1.0
1,116,409	+	ubiE	Synpcc7942_1099	0.21	-1.6
1,116,409	+	ubiE	Synpcc7942_1099	0.21	-2.7
1,116,414	+	ubiE	Synpcc7942_1099	0.22	-1.8
1,116,422	-	ubiE	Synpcc7942_1099	0.23	+1.0
1,116,422	-	ubiE	Synpcc7942_1099	0.23	-1.9
1,116,459	-	ubiE	Synpcc7942_1099	0.28	-2.7
1,116,459	-	ubiE	Synpcc7942_1099	0.28	-2.3
1,116,470	+	ubiE	Synpcc7942_1099	0.30	-2.4
1,116,484	+	ubiE	Synpcc7942_1099	0.32	-2.7
1,116,492	-	ubiE	Synpcc7942_1099	0.33	-2.0
1,116,523	-	ubiE	Synpcc7942_1099	0.37	-1.0
1,116,528	+	ubiE	Synpcc7942_1099	0.38	-3.5
1,116,529	+	ubiE	Synpcc7942_1099	0.38	-0.0
1,116,582	-	ubiE	Synpcc7942_1099	0.46	-0.3
1,116,584	+	ubiE	Synpcc7942_1099	0.46	-0.0
1,116,584	+	ubiE	Synpcc7942_1099	0.46	-0.6
1,116,584	+	ubiE	Synpcc7942_1099	0.46	-1.3
1,116,584	+	ubiE	Synpcc7942_1099	0.46	-1.3
1,116,584	+	ubiE	Synpcc7942_1099	0.46	-0.0
1,116,584	+	ubiE	Synpcc7942_1099	0.46	-0.6
1,116,584	+	ubiE	Synpcc7942_1099	0.46	-0.6
1,116,584	+	ubiE	Synpcc7942_1099	0.46	-4.6
1,116,584	+	ubiE	Synpcc7942_1099	0.46	-2.8
1,116,592	-	ubiE	Synpcc7942_1099	0.47	-3.3
1,116,592	-	ubiE	Synpcc7942_1099	0.47	-3.0
1,116,592	-	ubiE	Synpcc7942_1099	0.47	-1.6
1,116,592	-	ubiE	Synpcc7942_1099	0.47	+1.0
1,116,592	-	ubiE	Synpcc7942_1099	0.47	+1.0
1,116,592	-	ubiE	Synpcc7942_1099	0.47	-2.8
1,116,593	-	ubiE	Synpcc7942_1099	0.47	-1.6
1,116,604	+	ubiE	Synpcc7942_1099	0.49	-1.3
1,116,622	+	ubiE	Synpcc7942_1099	0.51	-1.0
1,116,636	-	ubiE	Synpcc7942_1099	0.53	-1.3
1,116,641	-	ubiE	Synpcc7942_1099	0.54	-3.7
1,116,641	-	ubiE	Synpcc7942_1099	0.54	+1.0
1,116,673	-	ubiE	Synpcc7942_1099	0.59	-1.8
1,116,676	-	ubiE	Synpcc7942_1099	0.59	-2.4
1,116,678	+	ubiE	Synpcc7942_1099	0.59	-2.6
1,116,726	+	ubiE	Synpcc7942_1099	0.66	+1.0
1,116,738	+	ubiE	Synpcc7942_1099	0.68	-1.8
1,116,793	+	ubiE	Synpcc7942_1099	0.76	-2.8
1,116,837	+	ubiE	Synpcc7942_1099	0.82	-2.0
1,116,845	-	ubiE	Synpcc7942_1099	0.83	-3.5
1,116,847	+	ubiE	Synpcc7942_1099	0.83	-3.0
1,116,877	+	ubiE	Synpcc7942_1099	0.88	-2.5
1,116,889	+	ubiE	Synpcc7942_1099	0.89	-3.9
1,116,900	+				-0.9
1,116,930	+				+0.4
1,116,951	-				-1.0
1,116,953	+				+0.2
1,116,958	+				+1.0
1,116,968	-				+0.9
1,116,974	-				-1.3
1,116,974	-				-0.5
1,116,989	+				+3.4
1,116,990	-				-0.0
1,117,030	+				-1.0
1,117,030	+				+1.5
1,117,047	+				+1.2
1,117,058	+				-0.3
1,117,058	+				-2.5
1,117,068	-				+1.6
1,117,079	+				+1.0
1,117,124	-				-1.0
1,118,463	+				+1.0
1,118,485	+				-1.6
1,118,485	+				-1.3
1,118,493	-				+1.0
1,118,521	+				+4.1
1,118,526	-				-3.3
1,118,534	-				+0.2
1,118,595	+				+1.7
1,118,595	+				-1.8
1,118,597	+				-1.6
1,118,622	+				-0.9
1,118,642	-				-1.0
1,118,654	-				+1.8
1,118,657	+				+2.9
1,118,665	-				-0.6
1,118,667	-				+2.9
1,118,694	-				-1.3
1,118,701	+				-3.2
1,118,723	+				+1.0
1,118,728	+				-0.6
1,118,728	+				+0.4
1,118,728	+				-1.3
1,118,728	+				+0.7
1,118,728	+				-2.7
1,118,728	+				+0.7
1,118,736	-				+2.5
1,118,788	+		Synpcc7942_1101	0.11	-2.5
1,118,808	+		Synpcc7942_1101	0.13	+1.9
1,118,808	+		Synpcc7942_1101	0.13	-2.6
1,118,808	+		Synpcc7942_1101	0.13	-1.0
1,118,816	-		Synpcc7942_1101	0.13	+0.9
1,118,874	+		Synpcc7942_1101	0.18	-1.3
1,118,882	-		Synpcc7942_1101	0.19	+1.0
1,118,887	-		Synpcc7942_1101	0.20	+1.8
1,118,910	+		Synpcc7942_1101	0.22	-0.6
1,118,966	+		Synpcc7942_1101	0.26	+0.8
1,118,974	+		Synpcc7942_1101	0.27	-2.8
1,118,995	+		Synpcc7942_1101	0.29	-1.6
1,119,064	-		Synpcc7942_1101	0.35	-1.8
1,119,087	+				+1.0
1,119,087	+		Synpcc7942_1101	0.37	+1.0
1,119,087	+		Synpcc7942_1101	0.37	-1.0
1,119,094	+		Synpcc7942_1101	0.37	-0.6
1,119,095	-		Synpcc7942_1101	0.37	+0.2
1,119,095	-		Synpcc7942_1101	0.37	-2.6
1,119,111	+		Synpcc7942_1101	0.39	-0.6
1,119,140	+				-0.0
1,119,176	+		Synpcc7942_1101	0.44	-1.4
1,119,222	+		Synpcc7942_1101	0.48	+0.2
1,119,224	+		Synpcc7942_1101	0.49	-2.3
1,119,228	-		Synpcc7942_1101	0.49	-0.2
1,119,230	-		Synpcc7942_1101	0.49	-0.3
1,119,232	-		Synpcc7942_1101	0.49	+2.1
1,119,232	-		Synpcc7942_1101	0.49	-1.6
1,119,232	-		Synpcc7942_1101	0.49	-2.0
1,119,284	-		Synpcc7942_1101	0.54	+1.0
1,119,322	-		Synpcc7942_1101	0.57	-1.3
1,119,339	-		Synpcc7942_1101	0.59	-2.5
1,119,356	+		Synpcc7942_1101	0.60	-1.6
1,119,364	-		Synpcc7942_1101	0.61	+1.7
1,119,364	-		Synpcc7942_1101	0.61	-0.0
1,119,413	+		Synpcc7942_1101	0.65	+1.0
1,119,432	-		Synpcc7942_1101	0.67	+1.0
1,119,437	-		Synpcc7942_1101	0.67	-0.9
1,119,437	-		Synpcc7942_1101	0.67	+1.5
1,119,452	-		Synpcc7942_1101	0.68	-2.5
1,119,495	+		Synpcc7942_1101	0.72	-0.0
1,119,502	-		Synpcc7942_1101	0.73	-1.6
1,119,503	-		Synpcc7942_1101	0.73	-3.0
1,119,512	-		Synpcc7942_1101	0.73	+1.2
1,119,513	-		Synpcc7942_1101	0.74	+1.6