Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1073

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,083,478	-		Synpcc7942_1071	0.58	-3.4
1,083,504	-		Synpcc7942_1071	0.63	+1.1
1,083,512	+		Synpcc7942_1071	0.64	-0.0
1,083,531	-		Synpcc7942_1071	0.68	-1.6
1,083,533	+		Synpcc7942_1071	0.68	-1.8
1,083,546	-		Synpcc7942_1071	0.70	-1.0
1,083,549	+		Synpcc7942_1071	0.71	-1.6
1,083,577	+		Synpcc7942_1071	0.76	+2.0
1,083,584	+		Synpcc7942_1071	0.77	-2.4
1,083,598	-		Synpcc7942_1071	0.80	-1.7
1,083,600	-		Synpcc7942_1071	0.80	+1.6
1,083,620	-		Synpcc7942_1071	0.83	-1.8
1,083,687	+				-0.1
1,083,693	-				-1.6
1,083,700	-				-1.0
1,083,705	-				+3.2
1,083,710	-				+0.7
1,083,719	-				+4.6
1,083,733	+				+2.4
1,083,752	-				-0.0
1,083,754	+				-2.5
1,083,756	+				-1.4
1,083,769	+				-1.4
1,083,770	+				+0.2
1,083,855	-	cobO	Synpcc7942_1072	0.15	+1.0
1,084,278	-				+0.3
1,084,286	+				-1.8
1,084,317	+				-1.0
1,084,447	-				+1.7
1,084,462	-				+1.6
1,084,465	+				-0.6
1,084,479	+				+0.8
1,084,511	-				-3.2
1,084,511	-				+1.0
1,084,536	+	rph	Synpcc7942_1073	0.12	-1.3
1,084,541	+	rph	Synpcc7942_1073	0.13	+2.1
1,084,544	-	rph	Synpcc7942_1073	0.13	-2.4
1,084,549	-	rph	Synpcc7942_1073	0.14	+1.0
1,084,578	-	rph	Synpcc7942_1073	0.18	-0.7
1,084,578	-	rph	Synpcc7942_1073	0.18	+0.6
1,084,578	-				-0.0
1,084,578	-	rph	Synpcc7942_1073	0.18	+2.3
1,084,580	-	rph	Synpcc7942_1073	0.18	-1.8
1,084,583	-	rph	Synpcc7942_1073	0.18	-1.1
1,084,624	-	rph	Synpcc7942_1073	0.24	-1.6
1,084,630	-	rph	Synpcc7942_1073	0.25	-1.0
1,084,630	-	rph	Synpcc7942_1073	0.25	+2.7
1,084,635	-	rph	Synpcc7942_1073	0.26	+3.0
1,084,636	-	rph	Synpcc7942_1073	0.26	-0.0
1,084,646	-	rph	Synpcc7942_1073	0.27	-2.8
1,084,700	-	rph	Synpcc7942_1073	0.35	-2.7
1,084,779	+	rph	Synpcc7942_1073	0.46	-2.7
1,084,787	-	rph	Synpcc7942_1073	0.47	-0.4
1,084,795	-	rph	Synpcc7942_1073	0.48	-2.4
1,084,797	+	rph	Synpcc7942_1073	0.48	+1.5
1,084,808	-	rph	Synpcc7942_1073	0.50	-2.2
1,084,828	+	rph	Synpcc7942_1073	0.53	-2.5
1,084,888	+	rph	Synpcc7942_1073	0.61	-1.6
1,084,911	+	rph	Synpcc7942_1073	0.64	-0.6
1,084,946	+	rph	Synpcc7942_1073	0.69	+2.8
1,084,983	+	rph	Synpcc7942_1073	0.74	-1.2
1,084,983	+	rph	Synpcc7942_1073	0.74	-0.5
1,084,983	+	rph	Synpcc7942_1073	0.74	-2.0
1,084,983	+	rph	Synpcc7942_1073	0.74	-0.6
1,084,991	-	rph	Synpcc7942_1073	0.75	+2.4
1,084,991	-	rph	Synpcc7942_1073	0.75	-1.8
1,084,991	-	rph	Synpcc7942_1073	0.75	-2.4
1,084,991	-	rph	Synpcc7942_1073	0.75	+0.8
1,084,994	+	rph	Synpcc7942_1073	0.76	+1.2
1,084,994	+	rph	Synpcc7942_1073	0.76	+1.0
1,084,994	+	rph	Synpcc7942_1073	0.76	+3.7
1,085,002	-	rph	Synpcc7942_1073	0.77	+3.5
1,085,002	-	rph	Synpcc7942_1073	0.77	+2.2
1,085,016	-	rph	Synpcc7942_1073	0.79	+3.1
1,085,018	+	rph	Synpcc7942_1073	0.79	-0.6
1,085,059	-	rph	Synpcc7942_1073	0.85	+1.2
1,085,129	+				-1.0
1,085,129	+				-2.6
1,085,134	+				-0.6
1,085,137	-				-0.0
1,085,137	-				-2.5
1,085,142	-				-0.6
1,085,142	-				+1.5
1,085,142	-				-1.8
1,085,149	+				-0.6
1,085,156	+				-0.6
1,085,157	-				+3.6
1,085,157	-				+1.4
1,085,164	-				+2.4
1,085,187	-				-0.6
1,085,189	+				+2.3
1,085,197	-				+0.6
1,085,197	-				+1.8
1,085,203	+				-1.5
1,085,203	+				-1.8
1,085,203	+				+2.9
1,085,203	+				+1.0
1,085,203	+				-1.3
1,085,208	+				-1.0
1,085,211	-				-2.2
1,085,211	-				-0.0
1,085,211	-				-1.0
1,085,215	+				-0.7
1,085,226	+				-1.2
1,085,226	+				-0.3
1,085,233	-				-2.7
1,085,235	+				+3.3
1,085,255	+				+0.7
1,085,281	+				+1.0
1,085,284	-				-1.6
1,085,289	-		Synpcc7942_1074	0.10	-1.0
1,085,289	-		Synpcc7942_1074	0.10	-2.6
1,085,319	-		Synpcc7942_1074	0.20	+2.0
1,085,329	-		Synpcc7942_1074	0.24	+2.4
1,085,337	-		Synpcc7942_1074	0.26	-3.9
1,085,358	+		Synpcc7942_1074	0.33	-1.3
1,085,380	+		Synpcc7942_1074	0.40	-3.3
1,085,417	+		Synpcc7942_1074	0.52	-3.3
1,085,417	+		Synpcc7942_1074	0.52	-0.6
1,085,417	+		Synpcc7942_1074	0.52	+2.4
1,085,425	-		Synpcc7942_1074	0.55	-3.7
1,085,429	+		Synpcc7942_1074	0.56	+2.7
1,085,429	+		Synpcc7942_1074	0.56	-2.3
1,085,429	+		Synpcc7942_1074	0.56	+3.3
1,085,429	+		Synpcc7942_1074	0.56	+3.5
1,085,437	-		Synpcc7942_1074	0.59	-1.6
1,085,437	-		Synpcc7942_1074	0.59	+0.3
1,085,437	-		Synpcc7942_1074	0.59	-0.6
1,085,437	-		Synpcc7942_1074	0.59	+2.1
1,085,437	-		Synpcc7942_1074	0.59	+2.0
1,085,437	-		Synpcc7942_1074	0.59	+1.2
1,085,437	-		Synpcc7942_1074	0.59	+0.4
1,085,464	+		Synpcc7942_1074	0.68	+1.0
1,085,467	+		Synpcc7942_1074	0.69	+1.7
1,085,480	-		Synpcc7942_1074	0.73	-1.2
1,085,537	+				-2.7
1,085,545	-				-0.0
1,085,578	+				-1.6
1,085,589	-				-1.2
1,085,589	-				+1.0
1,085,595	+				-0.2
1,085,603	-				-2.8
1,085,668	-				+0.2
1,085,682	+				-0.0
1,085,682	+				-1.8
1,085,682	+				-0.0
1,085,690	-				+2.1
1,085,690	-				-2.2
1,085,697	+				-2.2
1,085,705	-				-0.4
1,085,728	+		Synpcc7942_1075	0.11	+1.5
1,085,747	+		Synpcc7942_1075	0.13	-0.0
1,085,753	+		Synpcc7942_1075	0.14	+1.9
1,085,753	+		Synpcc7942_1075	0.14	+4.3
1,085,753	+		Synpcc7942_1075	0.14	-1.8
1,085,753	+		Synpcc7942_1075	0.14	+2.2
1,085,753	+		Synpcc7942_1075	0.14	-0.0
1,085,753	+		Synpcc7942_1075	0.14	+0.4
1,085,753	+		Synpcc7942_1075	0.14	-0.6
1,085,753	+		Synpcc7942_1075	0.14	-1.0
1,085,753	+		Synpcc7942_1075	0.14	-0.6
1,085,753	+		Synpcc7942_1075	0.14	-1.8
1,085,753	+		Synpcc7942_1075	0.14	-1.6
1,085,755	-		Synpcc7942_1075	0.14	-1.0
1,085,755	-		Synpcc7942_1075	0.14	-1.0
1,085,761	-		Synpcc7942_1075	0.15	-1.0
1,085,761	-		Synpcc7942_1075	0.15	-2.0
1,085,761	-		Synpcc7942_1075	0.15	+1.0
1,085,761	-		Synpcc7942_1075	0.15	-0.8
1,085,761	-		Synpcc7942_1075	0.15	+1.0
1,085,761	-		Synpcc7942_1075	0.15	-1.6
1,085,761	-		Synpcc7942_1075	0.15	+0.8
1,085,761	-		Synpcc7942_1075	0.15	-1.0
1,085,761	-		Synpcc7942_1075	0.15	+3.2
1,085,761	-		Synpcc7942_1075	0.15	-4.9
1,085,763	+		Synpcc7942_1075	0.15	-3.1
1,085,771	-		Synpcc7942_1075	0.16	-0.4
1,085,778	-		Synpcc7942_1075	0.17	+2.6
1,085,822	+		Synpcc7942_1075	0.22	-0.0
1,085,822	+		Synpcc7942_1075	0.22	-2.0
1,085,823	+		Synpcc7942_1075	0.23	+3.9
1,085,823	+		Synpcc7942_1075	0.23	-1.0
1,085,823	+		Synpcc7942_1075	0.23	-1.6
1,085,823	+		Synpcc7942_1075	0.23	-1.6
1,085,835	+		Synpcc7942_1075	0.24	+4.1
1,085,840	+		Synpcc7942_1075	0.25	+2.4
1,085,848	-		Synpcc7942_1075	0.26	-0.0
1,085,848	-		Synpcc7942_1075	0.26	-0.9
1,085,861	+		Synpcc7942_1075	0.27	-2.6
1,085,862	+		Synpcc7942_1075	0.28	+2.2
1,085,869	-				+1.0
1,085,870	-		Synpcc7942_1075	0.29	+1.3
1,085,871	+		Synpcc7942_1075	0.29	+0.3
1,085,871	+		Synpcc7942_1075	0.29	-0.3
1,085,881	+		Synpcc7942_1075	0.30	-0.6
1,085,904	-		Synpcc7942_1075	0.33	-1.2
1,085,915	-		Synpcc7942_1075	0.34	-1.2
1,085,966	+		Synpcc7942_1075	0.41	+1.0
1,085,974	-		Synpcc7942_1075	0.42	-0.3
1,086,011	-		Synpcc7942_1075	0.46	-0.3
1,086,060	+				-0.0
1,086,060	+		Synpcc7942_1075	0.53	-0.6
1,086,080	+		Synpcc7942_1075	0.55	-0.0
1,086,080	+		Synpcc7942_1075	0.55	-0.2
1,086,080	+		Synpcc7942_1075	0.55	-2.5
1,086,080	+		Synpcc7942_1075	0.55	-1.3
1,086,080	+		Synpcc7942_1075	0.55	-3.5
1,086,116	+		Synpcc7942_1075	0.60	-0.2
1,086,125	-		Synpcc7942_1075	0.61	-1.3
1,086,164	+		Synpcc7942_1075	0.66	+1.2