Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1013

Experiment: A22 0.000341796875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.000341796875 mg/ml
1,024,404	-	sphR	Synpcc7942_1012	0.56	+1.0
1,024,411	-	sphR	Synpcc7942_1012	0.57	+1.1
1,024,411	-	sphR	Synpcc7942_1012	0.57	-2.8
1,024,430	+	sphR	Synpcc7942_1012	0.60	+1.0
1,024,430	+	sphR	Synpcc7942_1012	0.60	+1.0
1,024,470	+				-0.0
1,024,478	-	sphR	Synpcc7942_1012	0.66	-0.0
1,024,486	-	sphR	Synpcc7942_1012	0.67	+0.4
1,024,488	+	sphR	Synpcc7942_1012	0.67	+1.3
1,024,493	+	sphR	Synpcc7942_1012	0.68	-0.2
1,024,501	-	sphR	Synpcc7942_1012	0.69	+0.4
1,024,515	+	sphR	Synpcc7942_1012	0.71	+0.5
1,024,536	-	sphR	Synpcc7942_1012	0.73	-0.8
1,024,560	+	sphR	Synpcc7942_1012	0.76	+0.1
1,024,568	+	sphR	Synpcc7942_1012	0.77	-1.8
1,024,576	-	sphR	Synpcc7942_1012	0.78	-1.4
1,024,616	+	sphR	Synpcc7942_1012	0.84	-1.6
1,024,658	+	sphR	Synpcc7942_1012	0.89	+1.1
1,024,658	+	sphR	Synpcc7942_1012	0.89	-0.2
1,024,659	+	sphR	Synpcc7942_1012	0.89	-0.2
1,024,666	-				-2.5
1,024,721	+				+2.6
1,024,730	+				-0.6
1,024,730	+				-1.0
1,024,730	+				-2.6
1,024,738	-				-0.0
1,024,738	-				-0.6
1,024,756	+				-3.3
1,024,758	-				+1.0
1,024,758	-				+1.6
1,024,764	+				+1.6
1,024,766	+				+0.2
1,024,766	+				-2.2
1,024,774	+				-2.0
1,024,782	-				-3.1
1,024,782	-				-1.2
1,024,798	+				-1.3
1,024,800	+				-1.0
1,024,813	+				-0.6
1,024,815	-				+2.1
1,024,821	-				+2.0
1,024,822	-				+2.6
1,024,827	+				-2.4
1,024,859	+				-0.9
1,024,906	-				-1.7
1,024,915	-				-1.6
1,025,013	+				-0.7
1,025,013	+				+1.6
1,025,021	-				+1.7
1,025,082	-				-0.0
1,025,115	-				-1.0
1,025,127	+				+3.1
1,025,151	-				-0.3
1,025,156	+				+1.0
1,025,156	+				-0.0
1,025,156	+				-2.7
1,025,156	+				+2.6
1,025,164	-				-1.0
1,025,164	-				+1.0
1,025,166	+				+2.0
1,025,166	+				-2.0
1,025,190	+				+0.0
1,025,213	-				+3.6
1,025,215	+				-0.1
1,025,372	+				+0.4
1,025,475	+		Synpcc7942_1013	0.36	-3.1
1,025,535	+		Synpcc7942_1013	0.62	-0.6
1,025,635	-				-0.5
1,025,682	+				-0.0
1,025,708	+				+0.6
1,025,775	+				-2.2
1,025,783	-				+4.0
1,025,790	+				-0.0
1,025,798	-				+1.0
1,025,801	+				+0.2
1,025,809	-				+3.3
1,025,820	+				-1.0
1,025,820	+				-1.4
1,025,820	+				+1.5
1,025,828	-				-2.0
1,025,877	+				+3.4
1,025,882	+				+1.0
1,025,882	+				+1.6
1,025,950	+		Synpcc7942_1014	0.12	+1.3
1,026,006	+		Synpcc7942_1014	0.14	-1.8
1,026,014	-				+4.7
1,026,035	-		Synpcc7942_1014	0.15	+3.2
1,026,035	-		Synpcc7942_1014	0.15	+4.6
1,026,058	+				-0.0
1,026,081	-		Synpcc7942_1014	0.16	+3.0
1,026,101	-		Synpcc7942_1014	0.17	+3.0
1,026,118	+		Synpcc7942_1014	0.18	-2.4
1,026,176	+		Synpcc7942_1014	0.20	+0.9
1,026,176	+		Synpcc7942_1014	0.20	+0.9
1,026,235	+		Synpcc7942_1014	0.22	-0.6
1,026,248	+		Synpcc7942_1014	0.22	-1.5
1,026,248	+		Synpcc7942_1014	0.22	+2.3
1,026,286	+		Synpcc7942_1014	0.24	+1.0
1,026,302	-		Synpcc7942_1014	0.24	+1.0
1,026,341	+		Synpcc7942_1014	0.26	+0.2
1,026,349	-		Synpcc7942_1014	0.26	+0.5
1,026,438	-		Synpcc7942_1014	0.29	+1.0
1,026,441	+		Synpcc7942_1014	0.29	-2.7
1,026,449	-		Synpcc7942_1014	0.29	-1.0
1,026,498	-		Synpcc7942_1014	0.31	-0.6
1,026,499	-		Synpcc7942_1014	0.31	+2.1
1,026,532	+		Synpcc7942_1014	0.32	-1.6
1,026,539	-		Synpcc7942_1014	0.33	+2.5
1,026,540	-		Synpcc7942_1014	0.33	+2.2
1,026,540	-		Synpcc7942_1014	0.33	+1.0
1,026,545	-		Synpcc7942_1014	0.33	+1.5
1,026,555	+		Synpcc7942_1014	0.33	-0.2
1,026,558	-		Synpcc7942_1014	0.33	-0.6
1,026,609	+		Synpcc7942_1014	0.35	+3.8
1,026,609	+				+1.0
1,026,609	+		Synpcc7942_1014	0.35	-1.8
1,026,623	-		Synpcc7942_1014	0.36	+0.3