Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_915

Experiment: L-Isoleucine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (C)
1,039,001	+		Pf1N1B4_913	0.69	+1.1
1,039,001	+		Pf1N1B4_913	0.69	-0.7
1,039,001	+		Pf1N1B4_913	0.69	+0.7
1,039,001	+		Pf1N1B4_913	0.69	-0.6
1,039,001	+		Pf1N1B4_913	0.69	+0.7
1,039,002	-		Pf1N1B4_913	0.69	-0.9
1,039,029	-		Pf1N1B4_913	0.75	+1.1
1,039,029	-		Pf1N1B4_913	0.75	-0.4
1,039,029	-		Pf1N1B4_913	0.75	-0.3
1,039,037	+		Pf1N1B4_913	0.76	-1.5
1,039,037	+		Pf1N1B4_913	0.76	-1.7
1,039,037	+				+0.1
1,039,054	+		Pf1N1B4_913	0.80	-0.1
1,039,054	+		Pf1N1B4_913	0.80	+0.3
1,039,055	-		Pf1N1B4_913	0.80	-1.5
1,039,055	-		Pf1N1B4_913	0.80	-0.2
1,039,106	+				+0.1
1,039,106	+				-0.1
1,039,106	+				-1.4
1,039,106	+				-0.2
1,039,106	+				-0.6
1,039,106	+				-0.5
1,039,106	+				+0.7
1,039,107	-				+2.1
1,039,107	-				+0.8
1,039,107	-				+0.1
1,039,107	-				-0.3
1,039,107	-				+0.7
1,039,173	+				-0.2
1,039,197	+				-1.5
1,039,547	-		Pf1N1B4_914	0.43	+0.1
1,039,547	-		Pf1N1B4_914	0.43	-0.2
1,039,550	+		Pf1N1B4_914	0.43	-1.9
1,039,550	+		Pf1N1B4_914	0.43	+0.7
1,039,550	+		Pf1N1B4_914	0.43	-0.7
1,039,550	+		Pf1N1B4_914	0.43	+0.1
1,039,551	-		Pf1N1B4_914	0.44	+0.1
1,039,551	-		Pf1N1B4_914	0.44	-1.0
1,039,551	-		Pf1N1B4_914	0.44	-2.1
1,039,573	-		Pf1N1B4_914	0.46	+0.7
1,039,585	+				+0.1
1,039,585	+		Pf1N1B4_914	0.48	-0.5
1,039,585	+		Pf1N1B4_914	0.48	+0.5
1,039,586	-		Pf1N1B4_914	0.48	+0.1
1,039,630	-		Pf1N1B4_914	0.54	-1.2
1,039,941	-				+0.1
1,039,983	-				-2.2
1,039,983	-				-2.2
1,039,987	+				-0.9
1,039,987	+				-2.4
1,039,987	+				-0.3
1,039,987	+				-1.2
1,039,987	+				-0.7
1,039,987	+				-1.1
1,039,987	+				-0.9
1,039,987	+				+1.7
1,039,988	-				-0.3
1,039,988	-				+1.7
1,039,988	-				+0.1
1,039,988	-				-0.9
1,039,988	-				-0.5
1,039,996	-				+0.7
1,039,996	-				-0.2
1,040,020	+				+1.1
1,040,020	+				-0.9
1,040,020	+				+1.8
1,040,021	-				-1.4
1,040,021	-				+0.1
1,040,021	-				-0.0
1,040,021	-				-0.9
1,040,021	-				-1.1
1,040,021	-				-1.2
1,040,051	-				+1.1
1,040,091	+				+0.1
1,040,092	-				+0.1
1,040,092	-				+1.1
1,040,092	-				-1.5
1,040,212	+		Pf1N1B4_915	0.20	-1.5
1,040,311	-		Pf1N1B4_915	0.29	-2.2
1,040,361	+		Pf1N1B4_915	0.33	+0.1
1,040,361	+		Pf1N1B4_915	0.33	-0.9
1,040,361	+		Pf1N1B4_915	0.33	-0.2
1,040,362	-		Pf1N1B4_915	0.34	-1.2
1,040,362	-				+1.1
1,040,362	-		Pf1N1B4_915	0.34	-0.5
1,040,362	-		Pf1N1B4_915	0.34	-1.9
1,040,362	-		Pf1N1B4_915	0.34	-0.9
1,040,362	-		Pf1N1B4_915	0.34	+0.5
1,040,362	-		Pf1N1B4_915	0.34	+0.1
1,040,362	-		Pf1N1B4_915	0.34	+0.1
1,040,362	-		Pf1N1B4_915	0.34	+2.1
1,040,682	+		Pf1N1B4_915	0.63	-0.5
1,040,683	-		Pf1N1B4_915	0.63	-1.5
1,040,697	+		Pf1N1B4_915	0.64	-3.1
1,040,698	-		Pf1N1B4_915	0.64	+1.7
1,040,722	-		Pf1N1B4_915	0.66	+0.7
1,040,722	-		Pf1N1B4_915	0.66	+1.1
1,040,795	+		Pf1N1B4_915	0.73	-1.9
1,040,824	-		Pf1N1B4_915	0.76	-1.7
1,040,829	+		Pf1N1B4_915	0.76	+0.1
1,040,829	+		Pf1N1B4_915	0.76	-1.1
1,040,830	-		Pf1N1B4_915	0.76	+1.7
1,040,830	-		Pf1N1B4_915	0.76	-1.7
1,040,830	-		Pf1N1B4_915	0.76	-1.9
1,040,830	-		Pf1N1B4_915	0.76	-2.1
1,040,830	-		Pf1N1B4_915	0.76	-2.5
1,040,830	-		Pf1N1B4_915	0.76	-1.3
1,040,830	-		Pf1N1B4_915	0.76	-0.5
1,040,951	+		Pf1N1B4_915	0.87	-0.9
1,040,952	-		Pf1N1B4_915	0.87	-2.2
1,040,952	-		Pf1N1B4_915	0.87	-0.9
1,040,952	-		Pf1N1B4_915	0.87	-2.2
1,040,952	-		Pf1N1B4_915	0.87	-0.7
1,040,952	-		Pf1N1B4_915	0.87	+0.4
1,040,958	+		Pf1N1B4_915	0.88	+2.1
1,040,968	-		Pf1N1B4_915	0.89	+0.1
1,040,968	-		Pf1N1B4_915	0.89	-0.9
1,040,968	-		Pf1N1B4_915	0.89	-1.5
1,040,968	-		Pf1N1B4_915	0.89	+0.5
1,041,079	+				-1.2
1,041,079	+				-1.5
1,041,079	+				-0.9
1,041,080	-				-0.9
1,041,080	-				-0.9
1,041,133	+				+0.1
1,041,133	+				+0.1
1,041,133	+				-0.5
1,041,133	+				+0.1
1,041,134	-				+0.7
1,041,175	+				-0.5
1,041,176	-				-0.9
1,041,307	+		Pf1N1B4_916	0.18	-3.1
1,041,472	+		Pf1N1B4_916	0.33	-0.9
1,041,472	+		Pf1N1B4_916	0.33	-2.5
1,041,472	+		Pf1N1B4_916	0.33	-1.9
1,041,472	+		Pf1N1B4_916	0.33	+1.1
1,041,473	-		Pf1N1B4_916	0.33	-0.6
1,041,809	+		Pf1N1B4_916	0.63	-1.9
1,041,900	+		Pf1N1B4_916	0.71	+0.1
1,041,900	+		Pf1N1B4_916	0.71	-0.1
1,041,901	-		Pf1N1B4_916	0.71	-1.1
1,041,901	-		Pf1N1B4_916	0.71	-0.9
1,041,901	-		Pf1N1B4_916	0.71	-1.9
1,041,904	+		Pf1N1B4_916	0.71	+0.1
1,041,904	+				+0.1
1,041,904	+		Pf1N1B4_916	0.71	-1.7
1,041,904	+		Pf1N1B4_916	0.71	-0.5
1,041,904	+		Pf1N1B4_916	0.71	-1.9
1,041,904	+		Pf1N1B4_916	0.71	+0.5
1,041,904	+		Pf1N1B4_916	0.71	-0.9
1,041,904	+		Pf1N1B4_916	0.71	-2.2
1,041,904	+		Pf1N1B4_916	0.71	-1.5
1,041,904	+		Pf1N1B4_916	0.71	-1.2
1,041,904	+		Pf1N1B4_916	0.71	+0.6
1,041,904	+		Pf1N1B4_916	0.71	+0.6
1,041,904	+		Pf1N1B4_916	0.71	-0.9
1,041,904	+		Pf1N1B4_916	0.71	-1.7
1,041,904	+				+0.1
1,041,904	+		Pf1N1B4_916	0.71	-0.9
1,041,904	+		Pf1N1B4_916	0.71	+0.1
1,041,904	+		Pf1N1B4_916	0.71	-1.9
1,041,904	+		Pf1N1B4_916	0.71	+0.1
1,041,905	-		Pf1N1B4_916	0.71	+0.5
1,041,905	-		Pf1N1B4_916	0.71	-0.6
1,041,905	-		Pf1N1B4_916	0.71	-1.7
1,041,905	-		Pf1N1B4_916	0.71	-3.1
1,041,905	-		Pf1N1B4_916	0.71	-0.9
1,041,905	-		Pf1N1B4_916	0.71	-1.5
1,041,905	-		Pf1N1B4_916	0.71	-2.2
1,041,905	-		Pf1N1B4_916	0.71	+0.1
1,041,905	-		Pf1N1B4_916	0.71	-0.9
1,041,905	-		Pf1N1B4_916	0.71	+0.7
1,041,905	-		Pf1N1B4_916	0.71	-1.5
1,041,905	-		Pf1N1B4_916	0.71	-0.5
1,041,905	-		Pf1N1B4_916	0.71	+0.1
1,041,905	-		Pf1N1B4_916	0.71	-0.9
1,041,905	-		Pf1N1B4_916	0.71	-1.2
1,041,905	-		Pf1N1B4_916	0.71	-0.3
1,041,905	-		Pf1N1B4_916	0.71	-1.5
1,041,905	-		Pf1N1B4_916	0.71	-0.9
1,042,045	+		Pf1N1B4_916	0.84	-0.8
1,042,045	+		Pf1N1B4_916	0.84	-1.7
1,042,045	+				+0.1
1,042,045	+		Pf1N1B4_916	0.84	-0.9
1,042,045	+		Pf1N1B4_916	0.84	-0.9
1,042,045	+		Pf1N1B4_916	0.84	-0.5
1,042,045	+		Pf1N1B4_916	0.84	+1.9
1,042,045	+		Pf1N1B4_916	0.84	-1.7
1,042,045	+		Pf1N1B4_916	0.84	-0.9
1,042,045	+		Pf1N1B4_916	0.84	-3.1
1,042,045	+		Pf1N1B4_916	0.84	-2.2
1,042,045	+		Pf1N1B4_916	0.84	-0.2
1,042,045	+		Pf1N1B4_916	0.84	+0.1
1,042,045	+		Pf1N1B4_916	0.84	+0.1
1,042,046	-		Pf1N1B4_916	0.84	-1.5
1,042,046	-		Pf1N1B4_916	0.84	+0.1
1,042,046	-		Pf1N1B4_916	0.84	-2.2
1,042,046	-		Pf1N1B4_916	0.84	+1.1
1,042,046	-		Pf1N1B4_916	0.84	+0.1
1,042,046	-		Pf1N1B4_916	0.84	+0.1
1,042,046	-		Pf1N1B4_916	0.84	-0.3
1,042,063	+		Pf1N1B4_916	0.85	-0.9
1,042,064	-		Pf1N1B4_916	0.85	-0.9
1,042,064	-		Pf1N1B4_916	0.85	-0.4