Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_672 and Pf1N1B4_673 overlap by 4 nucleotides Pf1N1B4_673 and Pf1N1B4_674 are separated by 208 nucleotides
Pf1N1B4_672 - FIG00955538: hypothetical protein, at 768,573 to 769,736
_672
Pf1N1B4_673 - MoxR-like ATPases, at 769,733 to 770,734
_673
Pf1N1B4_674 - POSSIBLE CONSERVED MEMBRANE PROTEIN, at 770,943 to 772,274
_674
Position (kb) 769
770
771 Strain fitness (log2 ratio) -2
-1
0
1 at 769.051 kb on - strand, within Pf1N1B4_672 at 769.051 kb on - strand, within Pf1N1B4_672 at 769.077 kb on + strand, within Pf1N1B4_672 at 769.078 kb on - strand, within Pf1N1B4_672 at 769.078 kb on - strand, within Pf1N1B4_672 at 769.243 kb on - strand, within Pf1N1B4_672 at 769.267 kb on - strand, within Pf1N1B4_672 at 769.305 kb on - strand, within Pf1N1B4_672 at 769.732 kb on + strand at 770.031 kb on - strand, within Pf1N1B4_673 at 770.077 kb on + strand, within Pf1N1B4_673 at 770.078 kb on - strand, within Pf1N1B4_673 at 770.078 kb on - strand, within Pf1N1B4_673 at 770.246 kb on + strand, within Pf1N1B4_673 at 770.247 kb on - strand, within Pf1N1B4_673 at 770.466 kb on - strand, within Pf1N1B4_673 at 770.548 kb on - strand, within Pf1N1B4_673 at 770.548 kb on - strand, within Pf1N1B4_673 at 770.817 kb on - strand at 770.846 kb on + strand at 770.895 kb on - strand at 770.895 kb on - strand at 771.146 kb on + strand, within Pf1N1B4_674 at 771.147 kb on - strand at 771.147 kb on - strand, within Pf1N1B4_674 at 771.147 kb on - strand, within Pf1N1B4_674 at 771.147 kb on - strand, within Pf1N1B4_674 at 771.185 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.394 kb on + strand, within Pf1N1B4_674 at 771.395 kb on - strand, within Pf1N1B4_674 at 771.421 kb on + strand at 771.421 kb on + strand, within Pf1N1B4_674 at 771.422 kb on - strand, within Pf1N1B4_674 at 771.422 kb on - strand, within Pf1N1B4_674 at 771.462 kb on + strand, within Pf1N1B4_674 at 771.462 kb on + strand at 771.639 kb on + strand, within Pf1N1B4_674 at 771.639 kb on + strand, within Pf1N1B4_674 at 771.639 kb on + strand at 771.640 kb on - strand, within Pf1N1B4_674 at 771.640 kb on - strand, within Pf1N1B4_674
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 769,051 - Pf1N1B4_672 0.41 +0.4 769,051 - Pf1N1B4_672 0.41 +1.6 769,077 + Pf1N1B4_672 0.43 -0.6 769,078 - Pf1N1B4_672 0.43 -1.0 769,078 - Pf1N1B4_672 0.43 -1.0 769,243 - Pf1N1B4_672 0.58 -0.4 769,267 - Pf1N1B4_672 0.60 -0.0 769,305 - Pf1N1B4_672 0.63 +0.1 769,732 + -1.6 770,031 - Pf1N1B4_673 0.30 -2.0 770,077 + Pf1N1B4_673 0.34 -2.6 770,078 - Pf1N1B4_673 0.34 -0.0 770,078 - Pf1N1B4_673 0.34 -2.0 770,246 + Pf1N1B4_673 0.51 -1.6 770,247 - Pf1N1B4_673 0.51 -0.6 770,466 - Pf1N1B4_673 0.73 +0.4 770,548 - Pf1N1B4_673 0.81 -0.7 770,548 - Pf1N1B4_673 0.81 -1.6 770,817 - +0.7 770,846 + +1.1 770,895 - -0.0 770,895 - -1.3 771,146 + Pf1N1B4_674 0.15 -0.6 771,147 - -0.0 771,147 - Pf1N1B4_674 0.15 -0.3 771,147 - Pf1N1B4_674 0.15 -0.4 771,147 - Pf1N1B4_674 0.15 -1.0 771,185 - Pf1N1B4_674 0.18 +1.0 771,227 - Pf1N1B4_674 0.21 +0.6 771,227 - Pf1N1B4_674 0.21 -0.0 771,227 - Pf1N1B4_674 0.21 -0.6 771,227 - Pf1N1B4_674 0.21 +0.6 771,227 - Pf1N1B4_674 0.21 +0.7 771,227 - Pf1N1B4_674 0.21 +1.6 771,227 - Pf1N1B4_674 0.21 -0.0 771,394 + Pf1N1B4_674 0.34 -0.0 771,395 - Pf1N1B4_674 0.34 -0.8 771,421 + -0.0 771,421 + Pf1N1B4_674 0.36 +0.4 771,422 - Pf1N1B4_674 0.36 +0.7 771,422 - Pf1N1B4_674 0.36 +0.7 771,462 + Pf1N1B4_674 0.39 -0.3 771,462 + -1.0 771,639 + Pf1N1B4_674 0.52 +0.2 771,639 + Pf1N1B4_674 0.52 -0.0 771,639 + -1.0 771,640 - Pf1N1B4_674 0.52 -1.6 771,640 - Pf1N1B4_674 0.52 +0.3
Or see this region's nucleotide sequence