Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3812

Experiment: L-Isoleucine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (C)
4,222,123	+				+0.0
4,222,124	-				-2.5
4,222,148	+				+1.1
4,222,149	-				+0.4
4,222,149	-				+0.8
4,222,149	-				-0.1
4,222,149	-				+0.0
4,222,156	-				-1.8
4,222,156	-				-1.8
4,222,156	-				-2.2
4,222,172	-				-0.2
4,222,207	-				-1.8
4,222,207	-				-0.2
4,222,247	-				-2.0
4,222,247	-				-2.8
4,222,247	-				-0.8
4,222,303	+				+0.8
4,222,311	-				+0.2
4,222,311	-				-1.4
4,222,325	-				+0.4
4,222,354	-				-1.9
4,222,354	-				-0.2
4,222,357	+				-0.2
4,222,357	+				-0.9
4,222,357	+				-0.2
4,222,357	+				-0.8
4,222,358	-				-1.2
4,222,358	-				-1.8
4,222,358	-				+0.4
4,222,358	-				+0.1
4,222,358	-				+1.0
4,222,358	-				+0.2
4,222,358	-				-0.8
4,222,358	-				+0.4
4,222,358	-				-0.2
4,222,358	-				-0.2
4,222,358	-				-0.2
4,222,358	-				+0.4
4,222,358	-				-0.9
4,222,370	+				+2.0
4,222,403	-				-0.8
4,222,440	-				-0.2
4,222,447	-				+1.4
4,222,447	-				-0.7
4,222,556	-				+0.4
4,222,556	-				+0.6
4,222,556	-				+0.8
4,222,556	-				-0.2
4,222,556	-				-0.9
4,222,590	-				+0.4
4,222,590	-		Pf1N1B4_3811	0.10	-0.5
4,222,651	+		Pf1N1B4_3811	0.27	+0.5
4,222,652	-		Pf1N1B4_3811	0.27	-2.0
4,222,652	-		Pf1N1B4_3811	0.27	+1.5
4,222,652	-		Pf1N1B4_3811	0.27	-1.9
4,222,965	+				-0.5
4,222,967	+				-0.5
4,222,967	+				+1.4
4,222,967	+				+0.4
4,222,967	+				-0.4
4,222,967	+				-1.5
4,222,967	+				+2.6
4,222,967	+				-2.2
4,222,967	+				+0.4
4,222,967	+				+1.4
4,222,967	+				-0.5
4,222,968	-				-1.2
4,222,978	+				-0.2
4,222,978	+				-0.2
4,222,978	+				+1.1
4,222,978	+				-1.2
4,222,979	-				-0.5
4,222,979	-				+0.2
4,222,991	+				-1.5
4,223,156	+		Pf1N1B4_3812	0.22	-1.8
4,223,156	+		Pf1N1B4_3812	0.22	-1.2
4,223,156	+		Pf1N1B4_3812	0.22	-1.2
4,223,157	-		Pf1N1B4_3812	0.23	-2.2
4,223,157	-		Pf1N1B4_3812	0.23	-3.0
4,223,157	-		Pf1N1B4_3812	0.23	-0.2
4,223,180	+		Pf1N1B4_3812	0.26	-1.8
4,223,180	+		Pf1N1B4_3812	0.26	-2.2
4,223,181	-		Pf1N1B4_3812	0.26	-1.5
4,223,229	-		Pf1N1B4_3812	0.32	-1.2
4,223,229	-		Pf1N1B4_3812	0.32	-2.2
4,223,405	+		Pf1N1B4_3812	0.56	-0.8
4,223,405	+		Pf1N1B4_3812	0.56	-1.9
4,223,405	+		Pf1N1B4_3812	0.56	-3.0
4,223,405	+		Pf1N1B4_3812	0.56	-1.8
4,223,405	+		Pf1N1B4_3812	0.56	-1.2
4,223,405	+		Pf1N1B4_3812	0.56	-2.5
4,223,406	-		Pf1N1B4_3812	0.56	-2.5
4,223,406	-		Pf1N1B4_3812	0.56	-3.0
4,223,406	-		Pf1N1B4_3812	0.56	-3.2
4,223,453	+		Pf1N1B4_3812	0.62	-1.5
4,223,454	-		Pf1N1B4_3812	0.63	-0.2
4,223,454	-		Pf1N1B4_3812	0.63	-1.2
4,223,454	-				-0.2
4,223,486	+		Pf1N1B4_3812	0.67	-3.0
4,223,486	+		Pf1N1B4_3812	0.67	-2.2
4,223,486	+		Pf1N1B4_3812	0.67	-2.4
4,223,486	+		Pf1N1B4_3812	0.67	-1.4
4,223,486	+		Pf1N1B4_3812	0.67	-0.2
4,223,486	+		Pf1N1B4_3812	0.67	-3.0
4,223,486	+		Pf1N1B4_3812	0.67	-1.8
4,223,487	-		Pf1N1B4_3812	0.67	-2.5
4,223,487	-		Pf1N1B4_3812	0.67	-3.0
4,223,487	-		Pf1N1B4_3812	0.67	-1.9
4,223,487	-		Pf1N1B4_3812	0.67	-0.9
4,223,487	-		Pf1N1B4_3812	0.67	-0.8
4,223,487	-		Pf1N1B4_3812	0.67	-2.2
4,223,487	-		Pf1N1B4_3812	0.67	-1.4
4,223,487	-		Pf1N1B4_3812	0.67	-2.2
4,223,487	-		Pf1N1B4_3812	0.67	-0.2
4,223,487	-		Pf1N1B4_3812	0.67	-2.2
4,223,487	-		Pf1N1B4_3812	0.67	-2.5
4,223,516	+		Pf1N1B4_3812	0.71	-2.2
4,223,516	+		Pf1N1B4_3812	0.71	-4.2
4,223,517	-		Pf1N1B4_3812	0.71	-0.6
4,223,517	-		Pf1N1B4_3812	0.71	-2.2
4,223,623	+		Pf1N1B4_3812	0.85	-1.2
4,223,690	+				-1.3
4,223,690	+				-1.2
4,223,690	+				-1.6
4,223,690	+				-3.7
4,223,690	+				-3.5
4,223,690	+				-2.2
4,223,690	+				-1.8
4,223,690	+				-1.2
4,223,690	+				-3.4
4,223,690	+				-2.5
4,223,691	-				-2.8
4,223,691	-				-2.5
4,223,691	-				-1.6
4,223,691	-				-2.2
4,223,691	-				-2.0
4,223,691	-				-3.4
4,223,744	+				-0.2
4,223,744	+				-3.5
4,223,769	+				-3.5
4,223,769	+				-0.2
4,223,769	+				-0.2
4,223,769	+				-1.2
4,223,769	+				-2.0
4,223,769	+				-3.7
4,223,769	+				-0.2
4,223,769	+				-2.8
4,223,769	+				-1.8
4,223,769	+				-1.5
4,223,769	+				-2.7
4,223,769	+				-2.3
4,223,769	+				-2.9
4,223,769	+				-2.5
4,223,769	+				-1.9
4,223,769	+				-1.2
4,223,769	+				-3.4
4,223,770	-				-0.2
4,223,770	-				-0.2
4,223,770	-				-1.2
4,223,770	-				-0.2
4,223,770	-				-1.2
4,223,770	-				-0.7
4,223,770	-				-0.2
4,223,771	+				+0.8
4,223,771	+				-0.8
4,223,771	+				-3.4
4,223,771	+				-1.4
4,223,771	+				-0.2
4,223,771	+				-3.2
4,223,771	+				-3.0
4,223,771	+				-3.2
4,223,771	+				-0.2
4,223,771	+				-2.0
4,223,771	+				-3.4
4,223,771	+				-3.2
4,223,771	+				-2.7
4,223,771	+				-4.2
4,223,771	+				-1.8
4,223,771	+				-1.4
4,223,771	+				-2.5
4,223,771	+				-0.6
4,223,771	+				-4.0
4,223,771	+				-1.8
4,223,771	+				-3.2
4,223,771	+				-2.8
4,223,771	+				-1.8
4,223,771	+				-2.5
4,223,771	+				-0.2
4,223,771	+				-1.2
4,223,771	+				-2.7
4,223,771	+				-1.2
4,223,771	+				-0.8
4,223,771	+				+1.1
4,223,771	+				-1.8
4,223,771	+				-2.0
4,223,771	+				+0.2
4,223,771	+				-2.5
4,223,771	+				-2.1
4,223,771	+				-2.5
4,223,771	+				-1.2
4,223,772	-				-1.4
4,223,772	-				+1.1
4,223,772	-				+1.1
4,223,772	-				-2.8
4,223,772	-				+1.4
4,223,772	-				+0.8
4,223,772	-				+0.8
4,223,772	-				+0.7
4,223,772	-				-0.2
4,223,772	-				+0.8
4,223,772	-				+1.4
4,223,772	-				-0.5
4,224,334	+		Pf1N1B4_3813	0.69	+1.8
4,224,334	+		Pf1N1B4_3813	0.69	-0.4
4,224,334	+		Pf1N1B4_3813	0.69	+0.2
4,224,335	-		Pf1N1B4_3813	0.70	-0.2
4,224,337	+		Pf1N1B4_3813	0.70	-1.5
4,224,364	+		Pf1N1B4_3813	0.74	+1.4
4,224,364	+		Pf1N1B4_3813	0.74	-1.2
4,224,364	+		Pf1N1B4_3813	0.74	-0.6
4,224,365	-		Pf1N1B4_3813	0.74	-1.2
4,224,365	-		Pf1N1B4_3813	0.74	+1.5
4,224,372	+		Pf1N1B4_3813	0.76	+0.8
4,224,520	+				+0.5
4,224,583	-				+0.2
4,224,656	+				-0.2