Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3218

Experiment: L-Isoleucine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (C)
3,598,798	-		Pf1N1B4_3217	0.36	+0.6
3,598,928	+		Pf1N1B4_3217	0.50	-0.0
3,599,237	+		Pf1N1B4_3217	0.84	-1.2
3,599,237	+				+1.0
3,599,237	+		Pf1N1B4_3217	0.84	-2.0
3,599,237	+		Pf1N1B4_3217	0.84	-1.0
3,599,237	+		Pf1N1B4_3217	0.84	-1.6
3,599,237	+		Pf1N1B4_3217	0.84	-1.6
3,599,237	+		Pf1N1B4_3217	0.84	-2.8
3,599,252	+		Pf1N1B4_3217	0.85	-0.4
3,599,252	+		Pf1N1B4_3217	0.85	+0.4
3,599,252	+		Pf1N1B4_3217	0.85	-1.2
3,599,252	+		Pf1N1B4_3217	0.85	-0.0
3,599,253	-		Pf1N1B4_3217	0.85	+2.0
3,599,253	-		Pf1N1B4_3217	0.85	-3.2
3,599,253	-		Pf1N1B4_3217	0.85	-1.0
3,599,304	+				-1.6
3,599,304	+				-2.3
3,599,304	+				-0.0
3,599,304	+				-0.0
3,599,305	-				-1.0
3,599,305	-				-0.0
3,599,327	+				-1.0
3,599,327	+				-2.6
3,599,327	+				+1.0
3,599,327	+				-2.0
3,599,327	+				-1.0
3,599,327	+				-1.0
3,599,327	+				-0.0
3,599,327	+				-0.0
3,599,327	+				-1.6
3,599,328	-				-0.0
3,599,328	-				-2.6
3,599,375	+				-2.0
3,599,375	+				-2.0
3,599,375	+				-1.6
3,599,375	+				-0.6
3,599,376	-				-0.7
3,599,376	-				-0.6
3,599,389	+				-1.0
3,599,412	-				-3.0
3,599,412	-				-1.6
3,599,557	+				-0.4
3,599,557	+				-1.5
3,599,557	+				-0.0
3,599,558	-				-2.8
3,599,565	+				-2.0
3,599,597	-				-2.2
3,599,597	-				-1.3
3,599,623	+				-2.6
3,599,624	-				-3.3
3,599,645	+				-1.0
3,599,646	-				-0.0
3,599,754	-		Pf1N1B4_3218	0.12	-1.0
3,599,754	-		Pf1N1B4_3218	0.12	-2.0
3,599,828	-		Pf1N1B4_3218	0.18	-1.6
3,600,077	-		Pf1N1B4_3218	0.40	-1.2
3,600,195	-		Pf1N1B4_3218	0.51	-0.0
3,600,221	-		Pf1N1B4_3218	0.53	-2.3
3,600,277	+		Pf1N1B4_3218	0.58	-1.0
3,600,277	+		Pf1N1B4_3218	0.58	-1.0
3,600,277	+		Pf1N1B4_3218	0.58	-1.1
3,600,277	+		Pf1N1B4_3218	0.58	-1.0
3,600,277	+				+1.6
3,600,277	+		Pf1N1B4_3218	0.58	-0.0
3,600,277	+		Pf1N1B4_3218	0.58	-2.8
3,600,277	+		Pf1N1B4_3218	0.58	-0.7
3,600,277	+		Pf1N1B4_3218	0.58	-0.4
3,600,277	+		Pf1N1B4_3218	0.58	-0.3
3,600,277	+		Pf1N1B4_3218	0.58	-1.0
3,600,277	+		Pf1N1B4_3218	0.58	-2.3
3,600,277	+		Pf1N1B4_3218	0.58	-0.0
3,600,278	-		Pf1N1B4_3218	0.58	-1.6
3,600,278	-		Pf1N1B4_3218	0.58	-0.0
3,600,278	-		Pf1N1B4_3218	0.58	-1.6
3,600,278	-		Pf1N1B4_3218	0.58	-1.6
3,600,278	-		Pf1N1B4_3218	0.58	+0.6
3,600,278	-		Pf1N1B4_3218	0.58	-0.9
3,600,282	-		Pf1N1B4_3218	0.59	-1.0
3,600,337	+		Pf1N1B4_3218	0.63	-0.0
3,600,403	+		Pf1N1B4_3218	0.69	-1.6
3,600,404	-		Pf1N1B4_3218	0.69	-1.0
3,600,404	-		Pf1N1B4_3218	0.69	-0.5
3,600,404	-		Pf1N1B4_3218	0.69	-0.0
3,600,523	+		Pf1N1B4_3218	0.80	-0.0
3,600,523	+		Pf1N1B4_3218	0.80	-2.0
3,600,524	-		Pf1N1B4_3218	0.80	+1.6
3,600,734	+				-0.0
3,600,734	+				-2.6
3,600,735	-				-0.0
3,600,735	-				+0.3
3,600,737	+				+1.0
3,600,744	-				-0.7
3,600,744	-				-0.0
3,600,750	-				-0.0
3,600,763	+				-1.0
3,600,763	+				-1.2
3,600,764	-				-0.4
3,600,771	+				-0.0
3,600,771	+				-0.4
3,600,772	-				-1.0
3,600,772	-				-2.6
3,600,778	+				+0.4
3,600,778	+				-1.6
3,600,778	+				-0.0
3,600,779	-				-2.0
3,600,779	-				-2.6
3,600,779	-				-3.6
3,600,779	-				-0.0
3,600,779	-				-2.0
3,600,779	-				-3.0
3,600,779	-				-1.6
3,600,779	-				-0.7
3,600,779	-				-4.1
3,600,779	-				-2.0
3,600,780	+				-0.8
3,600,781	-				+1.0
3,600,781	-				-2.9
3,600,866	+				-1.2
3,600,964	-				-2.8
3,600,964	-				-3.6
3,600,964	-				-3.3
3,600,972	-				-2.6
3,600,972	-				-1.0
3,600,974	+				-0.0
3,600,975	-				-1.5
3,600,975	-				-0.0
3,600,975	-				-1.6
3,600,975	-				-2.0
3,600,975	-				-1.0
3,600,975	-				-0.0
3,601,064	+				-2.0
3,601,065	-				-3.2
3,601,115	+				-1.6
3,601,115	+				-1.0
3,601,115	+				-1.3
3,601,115	+				-1.0
3,601,115	+				-0.0
3,601,115	+				+0.2
3,601,115	+				-1.3
3,601,116	-				-3.3
3,601,116	-				-4.1
3,601,116	-				-2.6
3,601,116	-				-3.2
3,601,116	-				-1.3
3,601,116	-				-1.6
3,601,116	-				-4.3
3,601,116	-				-2.0
3,601,126	-				-2.6
3,601,126	-				-2.0
3,601,126	-				-3.5
3,601,154	+				-0.6
3,601,154	+				-2.6
3,601,154	+				-0.0
3,601,154	+				-0.0
3,601,154	+				-2.0
3,601,154	+				-0.0
3,601,154	+				+1.0
3,601,154	+				+0.6
3,601,155	-				-0.0
3,601,155	-				-2.8
3,601,155	-				-1.6
3,601,155	-				-3.8
3,601,155	-				-2.8
3,601,155	-				-1.8
3,601,155	-				-2.6
3,601,155	-				-2.8
3,601,155	-				-0.4
3,601,155	-				-2.3
3,601,155	-				-0.0
3,601,155	-				-3.5
3,601,155	-				-0.0
3,601,155	-				-3.0
3,601,158	-				-2.0
3,601,198	+				-0.8
3,601,198	+				-1.8
3,601,199	-				-3.0
3,601,418	+				-0.3
3,601,419	-				-2.8
3,601,519	+				+1.0
3,601,519	+				-1.0
3,601,519	+				-0.6
3,601,540	-				-0.4
3,601,562	+				+0.4
3,601,562	+				-1.8
3,601,562	+				-0.4
3,601,563	-				-0.3
3,601,563	-				-1.8
3,601,563	-				-1.6
3,601,680	+				-0.6
3,601,680	+				-0.3
3,601,680	+				-1.0
3,601,681	-				-1.0
3,601,681	-				-0.0
3,601,681	-				-0.0
3,601,689	+				-2.8
3,601,690	-				+1.0
3,601,712	-				-0.0
3,601,712	-				-1.6
3,601,724	-				-0.6