Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2878

Experiment: L-Isoleucine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (C)
3,223,621	-				-0.8
3,223,636	+				+0.8
3,223,636	+				-0.4
3,223,636	+				-0.8
3,223,636	+				-0.8
3,223,636	+				-0.8
3,223,644	+				+0.2
3,223,644	+				-0.8
3,223,644	+				-0.1
3,223,644	+				-0.7
3,223,644	+				-0.7
3,223,644	+				+0.2
3,223,644	+				+0.2
3,223,645	-				-2.6
3,223,645	-				+1.2
3,223,645	-				-0.1
3,223,645	-				+1.5
3,223,645	-				-1.1
3,223,648	+				-1.4
3,223,648	+				+0.6
3,223,648	+				-2.6
3,223,648	+				-0.4
3,223,648	+				+2.2
3,223,648	+				-0.4
3,223,648	+				+1.5
3,223,648	+				-1.8
3,223,648	+				-1.1
3,223,648	+				+2.5
3,223,649	-				+1.8
3,223,649	-				-0.8
3,223,649	-				+1.8
3,223,649	-				-0.1
3,223,649	-				+0.4
3,223,649	-				+0.2
3,223,649	-				-0.5
3,223,649	-				+0.2
3,223,649	-				-0.8
3,223,649	-				-0.8
3,223,649	-				-0.4
3,223,649	-				-1.0
3,223,649	-				+0.6
3,223,753	+		Pf1N1B4_2877	0.26	+1.2
3,223,754	-		Pf1N1B4_2877	0.26	-0.6
3,223,754	-		Pf1N1B4_2877	0.26	-0.8
3,223,754	-		Pf1N1B4_2877	0.26	+0.6
3,223,754	-		Pf1N1B4_2877	0.26	-0.4
3,223,803	-		Pf1N1B4_2877	0.38	-0.8
3,223,803	-		Pf1N1B4_2877	0.38	-0.6
3,223,865	+		Pf1N1B4_2877	0.52	-2.1
3,223,865	+		Pf1N1B4_2877	0.52	-0.8
3,223,993	+		Pf1N1B4_2877	0.83	-0.0
3,223,993	+		Pf1N1B4_2877	0.83	-2.6
3,223,993	+		Pf1N1B4_2877	0.83	-1.4
3,223,993	+		Pf1N1B4_2877	0.83	+1.4
3,223,994	-		Pf1N1B4_2877	0.83	-0.1
3,223,994	-		Pf1N1B4_2877	0.83	-0.8
3,223,994	-		Pf1N1B4_2877	0.83	-0.8
3,223,994	-		Pf1N1B4_2877	0.83	-2.1
3,223,994	-		Pf1N1B4_2877	0.83	-1.2
3,223,994	-		Pf1N1B4_2877	0.83	+0.8
3,223,994	-		Pf1N1B4_2877	0.83	-0.8
3,223,994	-		Pf1N1B4_2877	0.83	-1.4
3,223,994	-		Pf1N1B4_2877	0.83	-0.4
3,223,995	+		Pf1N1B4_2877	0.83	+0.2
3,223,995	+				-0.8
3,223,995	+		Pf1N1B4_2877	0.83	+0.1
3,223,995	+				+0.2
3,223,995	+		Pf1N1B4_2877	0.83	+0.2
3,223,996	-		Pf1N1B4_2877	0.83	-0.8
3,223,996	-		Pf1N1B4_2877	0.83	+0.2
3,223,996	-		Pf1N1B4_2877	0.83	-1.8
3,223,996	-		Pf1N1B4_2877	0.83	-0.8
3,223,996	-		Pf1N1B4_2877	0.83	-1.5
3,223,996	-		Pf1N1B4_2877	0.83	+0.6
3,223,996	-		Pf1N1B4_2877	0.83	-2.0
3,223,996	-		Pf1N1B4_2877	0.83	+0.2
3,224,099	+				+0.7
3,224,145	+				-0.4
3,224,146	-				-1.8
3,224,146	-				-0.8
3,224,146	-				-2.1
3,224,146	-				-2.1
3,224,146	-				-2.8
3,224,146	-				-1.7
3,224,154	+				+0.2
3,224,155	-				-1.8
3,224,213	+				-0.8
3,224,214	-				-0.8
3,224,245	-				-0.8
3,224,245	-				-0.8
3,224,277	+				-1.8
3,224,277	+				-1.4
3,224,277	+				-2.0
3,224,278	-				-2.4
3,224,341	+				-1.1
3,224,341	+				+2.2
3,224,341	+				-1.2
3,224,342	-				-0.8
3,224,342	-				-3.4
3,224,342	-				-1.0
3,224,364	+				+1.2
3,224,365	-				-1.8
3,224,402	+				-0.4
3,224,402	+				+1.2
3,224,402	+				+0.8
3,224,403	-				-0.7
3,224,403	-				-3.0
3,224,403	-				-3.1
3,224,403	-				-1.8
3,224,403	-				-1.4
3,224,408	+				-1.4
3,224,408	+				+0.2
3,224,408	+				+0.1
3,224,408	+				-0.4
3,224,408	+				-1.4
3,224,408	+				+0.2
3,224,408	+				-0.1
3,224,408	+				-0.1
3,224,408	+				-0.6
3,224,408	+				-2.1
3,224,409	-				-2.1
3,224,409	-				-2.7
3,224,409	-				-2.8
3,224,409	-				-0.8
3,224,409	-				+2.2
3,224,409	-				-2.4
3,224,409	-				-0.8
3,224,409	-				-1.8
3,224,409	-				-3.5
3,224,409	-				-0.8
3,224,409	-				-1.4
3,224,428	+				+0.8
3,224,428	+				+0.2
3,224,428	+				+1.0
3,224,428	+				+0.9
3,224,428	+				-0.7
3,224,428	+				+0.5
3,224,428	+				+2.2
3,224,428	+				+0.6
3,224,428	+				+1.2
3,224,428	+				-1.8
3,224,428	+				+2.2
3,224,428	+				+0.2
3,224,428	+				+0.8
3,224,429	-				-1.4
3,224,429	-				-3.0
3,224,429	-				-1.8
3,224,429	-				-1.8
3,224,429	-				-2.1
3,224,429	-				-0.8
3,224,429	-				-2.1
3,224,429	-				-1.8
3,224,452	+				+1.8
3,224,452	+				-0.8
3,224,453	-				-3.3
3,224,476	+				-0.8
3,224,476	+				-1.8
3,224,526	+				-1.4
3,224,526	+				-1.8
3,224,526	+				-0.8
3,224,526	+				+0.2
3,224,526	+				-1.4
3,224,526	+				-0.8
3,224,526	+				-3.1
3,224,526	+				-0.8
3,224,526	+				-2.4
3,224,527	-				-2.4
3,224,527	-				-0.8
3,224,527	-				-1.4
3,224,527	-				-3.0
3,224,527	-				-1.6
3,224,527	-				-0.8
3,224,527	-				-1.4
3,224,527	-				-1.4
3,224,528	+				-2.1
3,224,528	+				-1.4
3,224,528	+				-2.4
3,224,528	+				-2.8
3,224,528	+				-1.8
3,224,528	+				-0.8
3,224,528	+				-1.4
3,224,528	+				-3.1
3,224,528	+				-1.8
3,224,529	-				-1.1
3,224,529	-				-2.4
3,224,529	-				+0.2
3,224,529	-				-1.8
3,224,529	-				+0.2
3,224,532	+				-2.6
3,224,532	+				-1.4
3,224,532	+				-0.8
3,224,532	+				-1.8
3,224,533	-				-1.4
3,224,533	-				-2.1
3,224,533	-				-1.4
3,224,533	-				-2.1
3,224,565	+				-1.4
3,224,565	+				-3.0
3,224,565	+				-2.1
3,224,565	+				-0.8
3,224,566	-				-0.8
3,224,566	-				-1.8
3,224,566	-				-0.5
3,224,566	-				-0.4
3,224,677	+		Pf1N1B4_2878	0.11	-2.0
3,224,733	+		Pf1N1B4_2878	0.14	-0.8
3,224,733	+		Pf1N1B4_2878	0.14	-1.8
3,224,733	+		Pf1N1B4_2878	0.14	-0.7
3,224,734	-		Pf1N1B4_2878	0.14	-3.8
3,224,734	-		Pf1N1B4_2878	0.14	-0.8
3,224,734	-		Pf1N1B4_2878	0.14	-1.8
3,224,734	-		Pf1N1B4_2878	0.14	-1.4
3,224,734	-		Pf1N1B4_2878	0.14	-2.4
3,224,734	-		Pf1N1B4_2878	0.14	-2.8
3,224,778	-		Pf1N1B4_2878	0.17	-0.8
3,224,788	+		Pf1N1B4_2878	0.18	-2.1
3,224,788	+		Pf1N1B4_2878	0.18	-1.8
3,224,789	-		Pf1N1B4_2878	0.18	-1.8
3,224,904	+		Pf1N1B4_2878	0.24	-1.4
3,224,905	-		Pf1N1B4_2878	0.24	-1.4
3,224,905	-		Pf1N1B4_2878	0.24	-1.4
3,224,905	-		Pf1N1B4_2878	0.24	-2.1
3,224,905	-		Pf1N1B4_2878	0.24	-2.1
3,224,905	-		Pf1N1B4_2878	0.24	-2.1
3,224,905	-		Pf1N1B4_2878	0.24	-2.1
3,224,985	+				-0.8
3,224,986	-		Pf1N1B4_2878	0.29	-0.4
3,224,986	-		Pf1N1B4_2878	0.29	-0.8
3,224,986	-		Pf1N1B4_2878	0.29	-0.8
3,224,986	-		Pf1N1B4_2878	0.29	-2.6
3,225,018	+		Pf1N1B4_2878	0.31	-0.8
3,225,018	+		Pf1N1B4_2878	0.31	-4.1
3,225,018	+		Pf1N1B4_2878	0.31	-1.8
3,225,018	+		Pf1N1B4_2878	0.31	-2.1
3,225,019	-		Pf1N1B4_2878	0.31	-1.4
3,225,019	-		Pf1N1B4_2878	0.31	-0.8
3,225,100	-		Pf1N1B4_2878	0.36	-1.8
3,225,256	-		Pf1N1B4_2878	0.45	-0.8
3,225,256	-		Pf1N1B4_2878	0.45	-0.8
3,225,256	-		Pf1N1B4_2878	0.45	-2.6
3,225,404	+		Pf1N1B4_2878	0.54	-0.8
3,225,404	+		Pf1N1B4_2878	0.54	-1.8
3,225,405	-		Pf1N1B4_2878	0.54	-2.4
3,225,405	-		Pf1N1B4_2878	0.54	+0.2
3,225,684	+		Pf1N1B4_2878	0.70	-2.1
3,225,685	-		Pf1N1B4_2878	0.70	+0.2
3,225,685	-		Pf1N1B4_2878	0.70	-0.1
3,225,687	+		Pf1N1B4_2878	0.70	-2.4
3,225,688	-		Pf1N1B4_2878	0.70	-1.4
3,225,688	-		Pf1N1B4_2878	0.70	-1.8
3,225,688	-		Pf1N1B4_2878	0.70	-1.8
3,225,688	-		Pf1N1B4_2878	0.70	-3.1
3,225,688	-		Pf1N1B4_2878	0.70	-1.0
3,225,861	+		Pf1N1B4_2878	0.81	-1.8
3,225,862	-		Pf1N1B4_2878	0.81	+0.2
3,225,902	-		Pf1N1B4_2878	0.83	-2.4
3,225,936	+		Pf1N1B4_2878	0.85	-1.4
3,225,937	-		Pf1N1B4_2878	0.85	+0.2
3,225,937	-		Pf1N1B4_2878	0.85	-1.8
3,225,960	+		Pf1N1B4_2878	0.86	-1.8
3,225,960	+		Pf1N1B4_2878	0.86	-3.7
3,225,961	-		Pf1N1B4_2878	0.86	-1.4
3,225,961	-		Pf1N1B4_2878	0.86	-0.8
3,225,961	-		Pf1N1B4_2878	0.86	-2.4
3,225,961	-		Pf1N1B4_2878	0.86	-3.0
3,225,961	-		Pf1N1B4_2878	0.86	-3.1
3,226,002	+		Pf1N1B4_2878	0.89	+1.2
3,226,003	-		Pf1N1B4_2878	0.89	-1.8
3,226,097	+				+0.2
3,226,098	-				-2.8
3,226,160	+				-0.8
3,226,160	+				-2.4
3,226,160	+				+1.2
3,226,160	+				-1.8
3,226,161	-				-0.8
3,226,161	-				-0.8
3,226,184	+				-1.4
3,226,184	+				-3.0
3,226,184	+				-1.8
3,226,184	+				-2.8
3,226,184	+				-1.4
3,226,184	+				+0.2
3,226,184	+				-0.8
3,226,185	-				-1.4
3,226,185	-				-2.4
3,226,185	-				-1.4
3,226,185	-				-1.4
3,226,188	+				-2.0
3,226,188	+				-2.1
3,226,188	+				-1.8
3,226,188	+				-0.8
3,226,188	+				-3.5
3,226,188	+				-0.8
3,226,189	-				-1.8
3,226,189	-				-0.8
3,226,189	-				-1.8
3,226,204	+				-4.1
3,226,204	+				-2.4
3,226,204	+				-1.4
3,226,204	+				-2.4
3,226,204	+				+0.2
3,226,204	+				-1.8
3,226,204	+				+0.2
3,226,204	+				-2.4
3,226,204	+				-1.8
3,226,204	+				-2.1
3,226,205	-				+0.2
3,226,205	-				-4.6
3,226,205	-				-2.1
3,226,205	-				-1.0
3,226,248	+		Pf1N1B4_2879	0.11	-1.8
3,226,248	+		Pf1N1B4_2879	0.11	-1.4
3,226,248	+		Pf1N1B4_2879	0.11	-2.1
3,226,248	+		Pf1N1B4_2879	0.11	-2.1
3,226,249	-		Pf1N1B4_2879	0.11	-2.1
3,226,274	+		Pf1N1B4_2879	0.16	-1.4
3,226,274	+		Pf1N1B4_2879	0.16	-1.4
3,226,274	+		Pf1N1B4_2879	0.16	-0.8
3,226,274	+		Pf1N1B4_2879	0.16	-2.6
3,226,274	+		Pf1N1B4_2879	0.16	-2.4
3,226,274	+		Pf1N1B4_2879	0.16	-0.0
3,226,274	+		Pf1N1B4_2879	0.16	-4.4
3,226,274	+		Pf1N1B4_2879	0.16	-1.4
3,226,274	+		Pf1N1B4_2879	0.16	-1.4
3,226,274	+		Pf1N1B4_2879	0.16	-2.6
3,226,274	+		Pf1N1B4_2879	0.16	-1.8
3,226,274	+		Pf1N1B4_2879	0.16	+0.2
3,226,275	-		Pf1N1B4_2879	0.17	-2.4
3,226,275	-		Pf1N1B4_2879	0.17	+0.2
3,226,275	-		Pf1N1B4_2879	0.17	-0.8
3,226,275	-		Pf1N1B4_2879	0.17	-1.4
3,226,275	-		Pf1N1B4_2879	0.17	-0.8
3,226,275	-		Pf1N1B4_2879	0.17	-1.4
3,226,275	-		Pf1N1B4_2879	0.17	-2.8
3,226,404	+		Pf1N1B4_2879	0.43	-0.8
3,226,405	-		Pf1N1B4_2879	0.43	-1.4
3,226,511	-		Pf1N1B4_2879	0.65	-1.8
3,226,515	-		Pf1N1B4_2879	0.65	-2.6
3,226,515	-		Pf1N1B4_2879	0.65	-2.6
3,226,550	+		Pf1N1B4_2879	0.73	-2.4
3,226,550	+		Pf1N1B4_2879	0.73	-2.6
3,226,550	+		Pf1N1B4_2879	0.73	-1.8
3,226,551	-		Pf1N1B4_2879	0.73	-1.4
3,226,551	-		Pf1N1B4_2879	0.73	-2.1
3,226,551	-		Pf1N1B4_2879	0.73	-1.4
3,226,551	-		Pf1N1B4_2879	0.73	-0.8
3,226,551	-		Pf1N1B4_2879	0.73	-0.8
3,226,552	+		Pf1N1B4_2879	0.73	-0.8
3,226,553	-		Pf1N1B4_2879	0.73	-3.1
3,226,671	+				+0.2
3,226,672	-				-1.4
3,226,672	-				-1.8
3,226,672	-				-3.1
3,226,683	-				+0.6
3,226,683	-				-1.8
3,226,692	+				+0.8
3,226,693	-				-3.1
3,226,716	+				-0.9
3,226,716	+				+2.2
3,226,716	+				-3.0
3,226,716	+				-0.8
3,226,716	+				-1.3
3,226,717	-				+0.2
3,226,717	-				-1.8
3,226,717	-				-3.1
3,226,717	-				-0.8
3,226,717	-				-0.8
3,226,717	-				-1.8
3,226,717	-				-1.4
3,226,718	+				-0.4
3,226,718	+				-1.1
3,226,718	+				-0.2
3,226,718	+				+1.2
3,226,718	+				-0.7
3,226,718	+				-0.1
3,226,718	+				-1.5
3,226,718	+				-0.5
3,226,719	-				-2.1
3,226,719	-				-1.6
3,226,719	-				-1.4
3,226,719	-				-1.8
3,226,749	+				-3.0
3,226,857	+		Pf1N1B4_2880	0.12	-0.8
3,226,858	-		Pf1N1B4_2880	0.12	-2.1
3,226,858	-		Pf1N1B4_2880	0.12	+0.2
3,226,872	+		Pf1N1B4_2880	0.14	-1.8
3,226,996	+		Pf1N1B4_2880	0.26	-1.8
3,226,996	+		Pf1N1B4_2880	0.26	-2.6
3,226,996	+		Pf1N1B4_2880	0.26	-3.1
3,226,996	+		Pf1N1B4_2880	0.26	-3.5
3,226,997	-		Pf1N1B4_2880	0.26	-1.4
3,226,997	-		Pf1N1B4_2880	0.26	+0.2
3,226,997	-		Pf1N1B4_2880	0.26	-2.8
3,227,068	+		Pf1N1B4_2880	0.33	-2.8
3,227,068	+		Pf1N1B4_2880	0.33	-3.5
3,227,068	+		Pf1N1B4_2880	0.33	-3.8
3,227,069	-				-0.8
3,227,069	-				+0.2
3,227,185	-		Pf1N1B4_2880	0.45	-2.4
3,227,188	+		Pf1N1B4_2880	0.45	-1.8
3,227,188	+		Pf1N1B4_2880	0.45	-3.0
3,227,188	+		Pf1N1B4_2880	0.45	-2.4
3,227,188	+		Pf1N1B4_2880	0.45	-2.8
3,227,188	+		Pf1N1B4_2880	0.45	-2.1
3,227,188	+		Pf1N1B4_2880	0.45	+0.2
3,227,188	+				+0.2
3,227,189	-		Pf1N1B4_2880	0.45	-2.8
3,227,189	-		Pf1N1B4_2880	0.45	-2.4