Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2787

Experiment: L-Isoleucine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (C)
3,131,089	+				-0.7
3,131,089	+				+0.2
3,131,089	+				-0.4
3,131,090	-				-0.4
3,131,152	+				-0.8
3,131,152	+				-1.4
3,131,152	+				-0.8
3,131,153	-				-0.4
3,131,164	+				+1.2
3,131,164	+				-1.4
3,131,164	+				-0.5
3,131,164	+				-1.0
3,131,165	-				+0.2
3,131,261	+				+1.5
3,131,261	+				+1.2
3,131,261	+				-0.5
3,131,262	-				+0.6
3,131,276	+				+0.2
3,131,276	+				-1.2
3,131,276	+				+2.0
3,131,276	+				+1.2
3,131,276	+				-1.4
3,131,277	-				-0.8
3,131,277	-				+0.2
3,131,277	-				-0.1
3,131,277	-				-0.1
3,131,277	-				-0.8
3,131,277	-				+0.2
3,131,277	-				+0.6
3,131,322	+		Pf1N1B4_2786	0.13	+0.1
3,131,322	+		Pf1N1B4_2786	0.13	+0.4
3,131,322	+		Pf1N1B4_2786	0.13	+1.6
3,131,323	-		Pf1N1B4_2786	0.13	-1.1
3,131,323	-		Pf1N1B4_2786	0.13	-1.4
3,131,323	-		Pf1N1B4_2786	0.13	-1.9
3,131,323	-		Pf1N1B4_2786	0.13	+1.2
3,131,323	-		Pf1N1B4_2786	0.13	+1.2
3,131,323	-		Pf1N1B4_2786	0.13	-0.8
3,131,435	+		Pf1N1B4_2786	0.36	+1.0
3,131,435	+		Pf1N1B4_2786	0.36	+0.5
3,131,435	+		Pf1N1B4_2786	0.36	+0.2
3,131,435	+		Pf1N1B4_2786	0.36	+0.7
3,131,436	-		Pf1N1B4_2786	0.36	-0.2
3,131,436	-		Pf1N1B4_2786	0.36	+0.2
3,131,436	-		Pf1N1B4_2786	0.36	-1.1
3,131,525	+		Pf1N1B4_2786	0.54	+1.2
3,131,525	+		Pf1N1B4_2786	0.54	+1.5
3,131,525	+				+0.8
3,131,525	+		Pf1N1B4_2786	0.54	-0.2
3,131,526	-		Pf1N1B4_2786	0.54	-1.2
3,131,571	+		Pf1N1B4_2786	0.64	-0.5
3,131,710	+				-0.0
3,131,727	+				+0.2
3,131,748	+				-0.6
3,131,748	+				+0.7
3,131,748	+				-1.4
3,131,748	+				+0.8
3,131,749	-				-1.1
3,131,749	-				-0.8
3,131,749	-				+0.2
3,131,752	+				-0.5
3,131,752	+				+0.2
3,131,752	+				+1.5
3,131,752	+				-0.8
3,131,752	+				+0.2
3,131,752	+				-2.6
3,131,752	+				-1.7
3,131,752	+				+0.8
3,131,752	+				-0.8
3,131,752	+				-0.4
3,131,752	+				-1.8
3,131,752	+				-0.0
3,131,752	+				-1.5
3,131,752	+				-1.1
3,131,752	+				+0.2
3,131,752	+				-0.8
3,131,752	+				-1.4
3,131,752	+				+2.5
3,131,753	-				+0.2
3,131,753	-				-0.3
3,131,753	-				+0.2
3,131,753	-				-0.1
3,131,753	-				-1.1
3,131,753	-				-0.2
3,131,753	-				+3.2
3,131,753	-				-1.4
3,131,753	-				-0.4
3,131,753	-				+2.2
3,131,753	-				-0.8
3,131,753	-				-0.7
3,131,753	-				-0.7
3,131,753	-				+0.1
3,131,753	-				-0.4
3,131,753	-				+1.8
3,131,771	+				+0.2
3,132,011	+				-1.4
3,132,011	+				-0.8
3,132,011	+				-1.0
3,132,011	+				-0.6
3,132,011	+				+1.2
3,132,012	-				+0.2
3,132,012	-				-0.4
3,132,012	-				-0.1
3,132,012	-				-0.5
3,132,012	-				-0.8
3,132,012	-				-0.4
3,132,012	-				+0.8
3,132,207	+				-0.4
3,132,207	+				+0.2
3,132,208	-				+0.8
3,132,257	+		Pf1N1B4_2787	0.12	+0.2
3,132,257	+		Pf1N1B4_2787	0.12	+1.2
3,132,305	+		Pf1N1B4_2787	0.14	-0.9
3,132,305	+		Pf1N1B4_2787	0.14	-0.2
3,132,306	-		Pf1N1B4_2787	0.14	-0.0
3,132,491	+				+0.2
3,132,491	+		Pf1N1B4_2787	0.24	+0.2
3,132,803	+		Pf1N1B4_2787	0.39	-1.0
3,132,803	+		Pf1N1B4_2787	0.39	-1.4
3,132,804	-		Pf1N1B4_2787	0.39	-0.7
3,132,804	-		Pf1N1B4_2787	0.39	+0.8
3,132,851	+		Pf1N1B4_2787	0.42	-1.0
3,132,851	+		Pf1N1B4_2787	0.42	-1.8
3,132,851	+		Pf1N1B4_2787	0.42	-1.4
3,132,851	+		Pf1N1B4_2787	0.42	-0.6
3,132,852	-		Pf1N1B4_2787	0.42	+1.2
3,132,852	-		Pf1N1B4_2787	0.42	-2.0
3,132,852	-		Pf1N1B4_2787	0.42	-1.8
3,132,852	-		Pf1N1B4_2787	0.42	-1.0
3,132,852	-		Pf1N1B4_2787	0.42	-1.8
3,132,852	-				+0.2
3,132,932	+		Pf1N1B4_2787	0.46	-0.1
3,133,005	-		Pf1N1B4_2787	0.49	+1.2
3,133,031	+		Pf1N1B4_2787	0.51	-2.4
3,133,031	+		Pf1N1B4_2787	0.51	-1.1
3,133,031	+		Pf1N1B4_2787	0.51	-1.1
3,133,032	-		Pf1N1B4_2787	0.51	-1.0
3,133,032	-		Pf1N1B4_2787	0.51	+1.2
3,133,055	+		Pf1N1B4_2787	0.52	-0.8
3,133,055	+		Pf1N1B4_2787	0.52	-0.8
3,133,056	-		Pf1N1B4_2787	0.52	-0.4
3,133,056	-		Pf1N1B4_2787	0.52	-0.8
3,133,056	-		Pf1N1B4_2787	0.52	-0.9
3,133,056	-		Pf1N1B4_2787	0.52	-1.4
3,133,064	+		Pf1N1B4_2787	0.52	+0.6
3,133,064	+		Pf1N1B4_2787	0.52	-1.8
3,133,301	+		Pf1N1B4_2787	0.64	-1.4
3,133,301	+		Pf1N1B4_2787	0.64	-2.1
3,133,301	+		Pf1N1B4_2787	0.64	-0.8
3,133,301	+				-0.4
3,133,301	+		Pf1N1B4_2787	0.64	-1.8
3,133,301	+		Pf1N1B4_2787	0.64	-1.8
3,133,301	+		Pf1N1B4_2787	0.64	-1.7
3,133,301	+		Pf1N1B4_2787	0.64	-0.5
3,133,301	+		Pf1N1B4_2787	0.64	-0.8
3,133,302	-		Pf1N1B4_2787	0.64	-2.4
3,133,302	-		Pf1N1B4_2787	0.64	-3.1
3,133,302	-		Pf1N1B4_2787	0.64	-1.8
3,133,302	-		Pf1N1B4_2787	0.64	+0.2
3,133,302	-		Pf1N1B4_2787	0.64	-0.2
3,133,302	-		Pf1N1B4_2787	0.64	+1.1
3,133,304	+		Pf1N1B4_2787	0.65	-2.4
3,133,304	+		Pf1N1B4_2787	0.65	-0.8
3,133,304	+		Pf1N1B4_2787	0.65	-1.7
3,133,305	-		Pf1N1B4_2787	0.65	+1.2
3,133,305	-		Pf1N1B4_2787	0.65	-1.4
3,133,305	-		Pf1N1B4_2787	0.65	-2.1
3,133,305	-		Pf1N1B4_2787	0.65	-0.8
3,133,427	-		Pf1N1B4_2787	0.71	-1.1
3,133,484	+		Pf1N1B4_2787	0.74	-0.8
3,133,484	+		Pf1N1B4_2787	0.74	+0.2
3,133,485	-		Pf1N1B4_2787	0.74	-1.8
3,133,485	-		Pf1N1B4_2787	0.74	-1.6
3,133,485	-		Pf1N1B4_2787	0.74	-0.1
3,133,958	+				-0.5
3,133,958	+				+1.2
3,133,958	+				-0.8
3,133,958	+				+0.2
3,133,958	+				-0.7
3,133,959	-				-1.2
3,134,530	-				+0.2
3,134,570	-				+0.2
3,134,570	-				+2.5
3,134,586	+				-1.0
3,134,586	+				+0.2
3,134,586	+				+0.2
3,134,586	+				+0.6
3,134,586	+				+0.2
3,134,586	+				+0.5
3,134,586	+				+0.5
3,134,587	-				+2.2
3,134,587	-				+0.2
3,134,587	-				+0.6
3,134,587	-				-0.4
3,134,610	+				-1.4
3,134,610	+				+0.8
3,134,610	+				+1.0
3,134,611	-				-0.9
3,134,611	-				-1.4
3,134,611	-				-0.8
3,134,611	-				+0.2
3,134,624	-				-0.9
3,134,687	+				-0.8
3,134,687	+				-2.4
3,134,687	+				-1.6
3,134,687	+				-0.5
3,134,688	-				-0.4
3,134,688	-				-1.5
3,134,688	-				+0.2
3,134,688	-				+1.8
3,134,688	-				-0.8
3,134,688	-				+1.2
3,134,688	-				+0.2
3,134,688	-				-0.8
3,134,688	-				-1.6
3,134,688	-				+0.5
3,134,688	-				-2.1
3,134,690	+				-1.4
3,134,690	+				-1.8
3,134,691	-				+0.6
3,134,691	-				+0.2
3,134,691	-				+0.1
3,134,691	-				-1.4
3,134,713	+				-0.8
3,134,762	-				-1.1
3,134,762	-				+0.2
3,134,862	-				-0.8
3,135,004	-		Pf1N1B4_2789	0.54	-0.4