Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2478

Experiment: L-Isoleucine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (C)
2,809,411	+				-1.0
2,809,412	-				-1.0
2,809,412	-				-1.2
2,809,412	-				+0.3
2,809,489	-				-0.1
2,809,587	+				-0.1
2,809,587	+				+0.9
2,809,587	+				-0.2
2,809,587	+				+1.6
2,809,587	+				-1.5
2,809,587	+				+1.3
2,809,587	+				+0.3
2,809,587	+				-0.2
2,809,588	-				-1.2
2,809,588	-				+1.3
2,809,588	-				-0.5
2,809,588	-				-0.7
2,809,588	-				-0.9
2,809,593	+				-0.4
2,809,593	+				+0.7
2,809,593	+				+1.9
2,809,594	-				-0.2
2,809,594	-				+0.5
2,809,594	-				+1.3
2,809,594	-				+0.8
2,809,594	-				-0.1
2,809,594	-				-1.7
2,809,594	-				+0.1
2,809,594	-				-0.1
2,809,594	-				+2.3
2,809,597	+				+0.5
2,809,598	-				+1.0
2,809,598	-				+0.9
2,809,598	-				-0.1
2,809,619	-				-0.3
2,809,656	+				+0.7
2,809,656	+				-1.2
2,809,657	-				-1.7
2,809,657	-				-0.2
2,809,775	+				+0.7
2,809,775	+				-2.0
2,809,776	-				+1.1
2,809,954	+		Pf1N1B4_2477	0.43	-0.1
2,809,954	+		Pf1N1B4_2477	0.43	+0.0
2,809,954	+		Pf1N1B4_2477	0.43	-0.4
2,809,954	+		Pf1N1B4_2477	0.43	+0.3
2,810,128	+		Pf1N1B4_2477	0.81	-0.2
2,810,128	+		Pf1N1B4_2477	0.81	+0.9
2,810,128	+		Pf1N1B4_2477	0.81	-0.9
2,810,129	-		Pf1N1B4_2477	0.81	+1.3
2,810,385	-				-0.1
2,810,657	-		Pf1N1B4_2478	0.12	+0.3
2,810,657	-				-0.7
2,810,657	-		Pf1N1B4_2478	0.12	-1.0
2,810,749	-		Pf1N1B4_2478	0.17	-0.7
2,810,907	+		Pf1N1B4_2478	0.24	-2.0
2,810,972	-		Pf1N1B4_2478	0.27	-4.5
2,811,296	-				+0.3
2,811,388	+		Pf1N1B4_2478	0.46	-2.5
2,811,388	+		Pf1N1B4_2478	0.46	-1.2
2,811,391	-		Pf1N1B4_2478	0.46	-0.7
2,811,391	-		Pf1N1B4_2478	0.46	-2.5
2,811,391	-		Pf1N1B4_2478	0.46	-3.2
2,811,391	-		Pf1N1B4_2478	0.46	-0.7
2,811,439	+		Pf1N1B4_2478	0.48	-1.2
2,811,440	-		Pf1N1B4_2478	0.48	-2.2
2,811,479	-		Pf1N1B4_2478	0.50	-0.7
2,811,489	-		Pf1N1B4_2478	0.51	-0.4
2,811,506	-		Pf1N1B4_2478	0.51	-2.2
2,811,601	+		Pf1N1B4_2478	0.56	-0.7
2,811,603	+		Pf1N1B4_2478	0.56	-2.5
2,811,603	+		Pf1N1B4_2478	0.56	-0.7
2,811,603	+		Pf1N1B4_2478	0.56	-2.0
2,811,603	+		Pf1N1B4_2478	0.56	+0.3
2,811,603	+		Pf1N1B4_2478	0.56	-2.0
2,811,603	+		Pf1N1B4_2478	0.56	-3.1
2,811,603	+		Pf1N1B4_2478	0.56	-1.7
2,811,604	-		Pf1N1B4_2478	0.56	-2.5
2,811,604	-		Pf1N1B4_2478	0.56	+0.3
2,811,604	-		Pf1N1B4_2478	0.56	-1.0
2,811,604	-		Pf1N1B4_2478	0.56	-2.2
2,811,604	-		Pf1N1B4_2478	0.56	-1.2
2,811,604	-		Pf1N1B4_2478	0.56	-3.9
2,811,604	-		Pf1N1B4_2478	0.56	-1.2
2,811,604	-		Pf1N1B4_2478	0.56	-1.2
2,811,699	+		Pf1N1B4_2478	0.60	-2.0
2,811,700	-		Pf1N1B4_2478	0.60	-0.4
2,811,987	+		Pf1N1B4_2478	0.73	-0.7
2,811,987	+		Pf1N1B4_2478	0.73	-2.0
2,811,988	-		Pf1N1B4_2478	0.74	+0.3
2,811,988	-		Pf1N1B4_2478	0.74	-3.1
2,812,086	+		Pf1N1B4_2478	0.78	-2.0
2,812,087	-		Pf1N1B4_2478	0.78	-0.7
2,812,137	+		Pf1N1B4_2478	0.80	-1.7
2,812,137	+		Pf1N1B4_2478	0.80	-1.8
2,812,138	-		Pf1N1B4_2478	0.80	+0.3
2,812,149	+		Pf1N1B4_2478	0.81	-0.2
2,812,149	+		Pf1N1B4_2478	0.81	-1.7
2,812,323	+		Pf1N1B4_2478	0.89	-1.2
2,812,323	+		Pf1N1B4_2478	0.89	+0.3
2,812,323	+		Pf1N1B4_2478	0.89	-3.1
2,812,375	+				-2.0
2,812,376	-				-2.5
2,812,407	-				-2.8
2,812,635	+				-2.8
2,812,635	+				-0.6
2,812,636	-				-0.6
2,812,636	-				-0.5
2,812,652	+				-0.2
2,812,653	-				-0.2
2,812,653	-				+0.4
2,812,653	-				-0.6
2,812,658	+				+0.4
2,812,658	+				-2.0
2,812,658	+				-1.2
2,812,659	-				-0.2
2,812,659	-				-2.1
2,812,659	-				-0.1
2,812,767	+				+0.8
2,812,767	+				-0.7
2,812,768	-				+0.9
2,812,768	-				+2.7
2,812,771	+				-0.2
2,812,771	+				-1.5
2,812,772	-				+0.5
2,812,788	+				+0.8
2,812,789	-				-1.2
2,812,791	+				+0.4
2,812,792	-				-0.6
2,812,792	-				+0.4
2,812,823	+				+0.4
2,812,823	+				+1.9
2,812,823	+				+2.4
2,812,824	-				+0.2
2,812,824	-				-2.0
2,812,827	+				-1.2
2,812,827	+				+0.6
2,812,827	+				-0.2
2,812,828	-				+0.9
2,812,828	-				+0.9
2,812,925	+				-0.6
2,812,925	+				+0.4
2,812,926	-				-0.4
2,812,931	+				+0.2
2,812,931	+				+0.4
2,812,931	+				-0.2
2,812,931	+				-2.2
2,812,932	-				-1.0
2,813,017	-				-0.5
2,813,128	+				+0.4
2,813,128	+				+1.7
2,813,128	+				+0.0
2,813,128	+				-0.2
2,813,129	-				-0.6
2,813,129	-				-2.8
2,813,129	-				-0.6
2,813,129	-				-1.5
2,813,129	-				-2.2
2,813,129	-				-0.3
2,813,129	-				-1.0
2,813,129	-				+0.4
2,813,130	+				+0.4
2,813,130	+				+0.6
2,813,130	+				+0.4
2,813,130	+				-0.5
2,813,130	+				+0.7
2,813,130	+				+1.2
2,813,130	+				-0.9
2,813,130	+				-0.2
2,813,130	+				+1.4
2,813,131	-				-1.2
2,813,131	-				-0.3
2,813,131	-				-1.6
2,813,131	-				+0.0
2,813,131	-				-1.5
2,813,131	-				-0.1
2,813,131	-				+0.2
2,813,131	-				-0.6
2,813,143	-				-0.2
2,813,143	-				+0.4
2,813,188	-				+0.4
2,813,339	+		Pf1N1B4_2479	0.32	+0.4
2,813,352	+		Pf1N1B4_2479	0.34	-1.6
2,813,353	-		Pf1N1B4_2479	0.34	-1.2
2,813,541	+		Pf1N1B4_2479	0.71	-0.3
2,813,541	+		Pf1N1B4_2479	0.71	-0.6
2,813,542	-		Pf1N1B4_2479	0.71	+0.4