Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2169

Experiment: L-Isoleucine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (C)
2,482,262	+				+0.1
2,482,262	+				+0.5
2,482,262	+				-0.0
2,482,262	+				+0.5
2,482,262	+				+0.5
2,482,263	-				-0.8
2,482,263	-				-0.5
2,482,263	-				+0.5
2,482,282	+				-0.3
2,482,321	+				-0.3
2,482,388	+				-0.7
2,482,388	+				+0.3
2,482,388	+				-0.9
2,482,388	+				-2.1
2,482,389	-				-0.5
2,482,389	-				-1.1
2,482,389	-				+1.3
2,482,389	-				-0.5
2,482,389	-				-0.2
2,482,389	-				+0.2
2,482,527	-				+0.1
2,482,527	-				-0.8
2,482,542	+				+1.0
2,482,542	+				-0.5
2,482,543	-				-1.9
2,482,543	-				-0.1
2,482,543	-				-0.1
2,482,543	-				-0.1
2,482,543	-				+0.0
2,482,543	-				+0.5
2,482,574	+				-2.3
2,482,574	+				-0.1
2,482,604	+				-1.9
2,482,604	+				-0.9
2,482,604	+				+1.5
2,482,604	+				-1.5
2,482,605	-				+0.0
2,482,605	-				+0.0
2,482,605	-				+0.9
2,482,605	-				-0.8
2,482,605	-				-0.5
2,482,605	-				+0.1
2,482,605	-				+2.8
2,482,605	-				-0.1
2,482,605	-				-1.5
2,482,605	-				+1.5
2,482,605	-				-0.2
2,482,605	-				-1.7
2,482,605	-				-1.1
2,482,605	-				-1.1
2,482,605	-				-1.3
2,482,605	-				+0.1
2,482,605	-				+1.0
2,482,605	-				-0.5
2,482,605	-				+0.5
2,482,605	-				+0.5
2,482,605	-				+0.0
2,482,605	-				-0.1
2,482,673	-		Pf1N1B4_2168	0.16	+0.5
2,482,673	-		Pf1N1B4_2168	0.16	-1.2
2,482,673	-		Pf1N1B4_2168	0.16	-0.5
2,482,673	-		Pf1N1B4_2168	0.16	+0.1
2,482,673	-		Pf1N1B4_2168	0.16	-1.9
2,482,729	+		Pf1N1B4_2168	0.29	+0.5
2,482,736	+		Pf1N1B4_2168	0.31	-2.3
2,482,737	-		Pf1N1B4_2168	0.31	-0.2
2,482,737	-		Pf1N1B4_2168	0.31	-1.3
2,482,737	-		Pf1N1B4_2168	0.31	+0.5
2,482,737	-		Pf1N1B4_2168	0.31	-1.9
2,482,737	-		Pf1N1B4_2168	0.31	-1.1
2,482,737	-		Pf1N1B4_2168	0.31	-1.1
2,482,737	-		Pf1N1B4_2168	0.31	-0.5
2,482,737	-		Pf1N1B4_2168	0.31	-2.1
2,482,737	-		Pf1N1B4_2168	0.31	-1.3
2,482,737	-		Pf1N1B4_2168	0.31	+0.8
2,482,737	-		Pf1N1B4_2168	0.31	+0.9
2,482,737	-		Pf1N1B4_2168	0.31	+0.7
2,482,737	-		Pf1N1B4_2168	0.31	-1.9
2,482,781	-				-0.5
2,482,781	-		Pf1N1B4_2168	0.41	-1.9
2,482,837	-		Pf1N1B4_2168	0.54	+0.7
2,482,845	-		Pf1N1B4_2168	0.56	+0.5
2,482,845	-		Pf1N1B4_2168	0.56	+1.5
2,482,891	+		Pf1N1B4_2168	0.67	+0.5
2,482,891	+		Pf1N1B4_2168	0.67	-2.3
2,482,891	+				-1.5
2,482,892	-				-0.5
2,482,892	-		Pf1N1B4_2168	0.67	+0.5
2,482,892	-		Pf1N1B4_2168	0.67	-0.5
2,482,892	-		Pf1N1B4_2168	0.67	-0.9
2,482,892	-		Pf1N1B4_2168	0.67	-0.1
2,482,892	-		Pf1N1B4_2168	0.67	-2.0
2,482,892	-		Pf1N1B4_2168	0.67	-0.7
2,482,892	-		Pf1N1B4_2168	0.67	-0.5
2,482,959	+		Pf1N1B4_2168	0.83	-1.6
2,482,960	-		Pf1N1B4_2168	0.83	-0.3
2,482,960	-		Pf1N1B4_2168	0.83	-0.3
2,482,960	-		Pf1N1B4_2168	0.83	+0.9
2,482,960	-		Pf1N1B4_2168	0.83	-1.1
2,482,960	-		Pf1N1B4_2168	0.83	-0.1
2,482,995	-				+1.5
2,483,098	-				+0.0
2,483,099	+				-0.5
2,483,099	+				-0.5
2,483,099	+				-1.9
2,483,099	+				+1.5
2,483,099	+				-1.3
2,483,100	-				+1.5
2,483,100	-				+1.2
2,483,100	-				-1.5
2,483,100	-				+0.9
2,483,100	-				+0.1
2,483,100	-				-1.0
2,483,100	-				+0.0
2,483,100	-				+0.5
2,483,100	-				+0.5
2,483,100	-				+0.9
2,483,100	-				-0.8
2,483,100	-				-1.0
2,483,103	+				-1.9
2,483,103	+				+0.5
2,483,103	+				-2.3
2,483,103	+				-0.2
2,483,103	+				-1.5
2,483,103	+				+1.7
2,483,104	-				+0.5
2,483,104	-				+1.5
2,483,104	-				+0.5
2,483,104	-				-0.9
2,483,104	-				+0.5
2,483,104	-				-1.1
2,483,104	-				-0.8
2,483,104	-				-1.1
2,483,104	-				+0.5
2,483,104	-				+0.5
2,483,104	-				+1.0
2,483,129	+				-1.3
2,483,129	+				-0.5
2,483,129	+				-1.0
2,483,129	+				-1.5
2,483,129	+				-1.3
2,483,129	+				-0.1
2,483,129	+				+0.5
2,483,129	+				-1.1
2,483,129	+				+1.5
2,483,129	+				-1.0
2,483,129	+				+0.5
2,483,129	+				+0.5
2,483,130	-				+1.5
2,483,130	-				+1.5
2,483,130	-				-2.1
2,483,130	-				+0.0
2,483,130	-				-1.1
2,483,130	-				-1.7
2,483,130	-				-0.5
2,483,130	-				-0.5
2,483,130	-				-0.5
2,483,172	+		Pf1N1B4_2169	0.11	-0.3
2,483,172	+		Pf1N1B4_2169	0.11	-0.5
2,483,172	+		Pf1N1B4_2169	0.11	+2.5
2,483,172	+		Pf1N1B4_2169	0.11	+0.5
2,483,172	+		Pf1N1B4_2169	0.11	+0.9
2,483,173	-		Pf1N1B4_2169	0.12	+1.5
2,483,173	-		Pf1N1B4_2169	0.12	+3.0
2,483,173	-		Pf1N1B4_2169	0.12	-1.5
2,483,173	-		Pf1N1B4_2169	0.12	+2.0
2,483,432	-				-0.5
2,483,438	+				-0.9
2,483,439	-				-0.3
2,483,439	-				-0.1
2,483,439	-				-0.7
2,483,452	+				-0.2
2,483,452	+				-1.1
2,483,452	+				+1.5
2,483,452	+				-1.0
2,483,453	-				+0.5
2,483,453	-				-0.1
2,483,453	-				+0.9
2,483,453	-				-0.5
2,483,456	+				-1.0
2,483,456	+				-0.5
2,483,456	+				-0.1
2,483,456	+				-1.9
2,483,456	+				-0.0
2,483,456	+				-0.5
2,483,456	+				-1.0
2,483,456	+				-0.5
2,483,456	+				-1.1
2,483,456	+				-0.5
2,483,456	+				+0.9
2,483,456	+				+0.2
2,483,457	-				-0.5
2,483,457	-				-1.7
2,483,457	-				+1.0
2,483,457	-				-0.5
2,483,457	-				+0.9
2,483,457	-				-1.5
2,483,457	-				-0.3
2,483,457	-				+0.5
2,483,457	-				+0.5
2,483,457	-				-0.1
2,483,457	-				-0.5
2,483,553	+				-0.3
2,483,553	+				+1.0
2,483,553	+				-1.5
2,483,553	+				-0.5
2,483,554	-				+0.2
2,483,554	-				-0.1
2,483,554	-				+1.0
2,483,554	-				-0.9
2,483,554	-				+0.2
2,483,554	-				-0.5
2,483,554	-				+0.5
2,483,558	+				+0.1
2,483,558	+				+0.5
2,483,558	+				-0.1
2,483,559	-				-1.9
2,483,559	-				+1.5
2,483,569	+				+0.1
2,483,569	+				-0.9
2,483,569	+				+2.3
2,483,570	-				+0.1
2,483,570	-				+0.5
2,483,570	-				-0.3
2,483,570	-				+0.5
2,483,570	-				+0.8
2,483,570	-				-1.9
2,483,570	-				+0.5
2,483,577	+				-0.8
2,483,578	-				-0.4
2,483,623	-				-0.3
2,483,623	-				-1.7
2,483,623	-				+0.2
2,483,623	-				-1.5
2,483,629	+				-1.7
2,483,629	+				+0.7
2,483,630	-				-1.7
2,483,630	-				-1.9
2,483,668	+				-0.8
2,483,705	+		Pf1N1B4_2170	0.12	-0.2
2,483,706	-		Pf1N1B4_2170	0.12	-1.1
2,483,788	+		Pf1N1B4_2170	0.24	-0.5
2,483,789	-		Pf1N1B4_2170	0.24	+1.5
2,483,789	-		Pf1N1B4_2170	0.24	-0.1
2,483,789	-		Pf1N1B4_2170	0.24	+0.5
2,483,789	-		Pf1N1B4_2170	0.24	-1.5
2,483,899	-		Pf1N1B4_2170	0.40	-0.3
2,483,951	+		Pf1N1B4_2170	0.47	-1.7
2,483,952	-		Pf1N1B4_2170	0.47	+0.5
2,483,952	-		Pf1N1B4_2170	0.47	+0.5
2,483,958	+		Pf1N1B4_2170	0.48	-1.9
2,483,958	+		Pf1N1B4_2170	0.48	+0.5
2,484,070	+		Pf1N1B4_2170	0.64	+0.5
2,484,070	+		Pf1N1B4_2170	0.64	+0.2
2,484,071	-		Pf1N1B4_2170	0.64	-0.7
2,484,071	-		Pf1N1B4_2170	0.64	-0.3
2,484,071	-		Pf1N1B4_2170	0.64	+0.5
2,484,071	-		Pf1N1B4_2170	0.64	+0.0
2,484,071	-		Pf1N1B4_2170	0.64	+0.1
2,484,336	+				+1.5
2,484,368	+				-0.1
2,484,368	+				-0.1
2,484,368	+				-0.4
2,484,404	+				-0.1
2,484,404	+				-2.9
2,484,404	+				+0.1
2,484,404	+				-0.5
2,484,404	+				-1.1
2,484,405	-				-0.9
2,484,405	-				-0.5
2,484,405	-				+0.5