Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1489

Experiment: L-Isoleucine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (C)
1,714,760	+		Pf1N1B4_1487	0.65	+0.2
1,714,803	-		Pf1N1B4_1487	0.68	+0.4
1,714,862	+		Pf1N1B4_1487	0.72	-1.3
1,714,862	+		Pf1N1B4_1487	0.72	+1.1
1,714,862	+		Pf1N1B4_1487	0.72	-0.0
1,714,943	+		Pf1N1B4_1487	0.77	+0.4
1,715,021	+		Pf1N1B4_1487	0.82	-0.2
1,715,022	-		Pf1N1B4_1487	0.83	-2.2
1,715,022	-		Pf1N1B4_1487	0.83	-1.2
1,715,075	+		Pf1N1B4_1487	0.86	+0.4
1,715,075	+		Pf1N1B4_1487	0.86	-0.8
1,715,075	+		Pf1N1B4_1487	0.86	-1.9
1,715,075	+		Pf1N1B4_1487	0.86	-1.6
1,715,075	+		Pf1N1B4_1487	0.86	-1.6
1,715,075	+		Pf1N1B4_1487	0.86	+1.4
1,715,075	+		Pf1N1B4_1487	0.86	+1.4
1,715,075	+		Pf1N1B4_1487	0.86	-0.2
1,715,076	-		Pf1N1B4_1487	0.86	+2.0
1,715,076	-		Pf1N1B4_1487	0.86	-0.6
1,715,076	-		Pf1N1B4_1487	0.86	+0.4
1,715,076	-		Pf1N1B4_1487	0.86	-0.2
1,715,076	-		Pf1N1B4_1487	0.86	-1.2
1,715,076	-		Pf1N1B4_1487	0.86	-0.7
1,715,076	-				-1.2
1,715,178	-				-1.0
1,715,241	-				+1.4
1,715,241	-				-0.4
1,715,241	-				-0.6
1,715,305	+				-0.6
1,715,305	+				-0.6
1,715,306	-				-0.6
1,715,306	-				+0.4
1,715,310	-				+2.0
1,715,310	-				-0.2
1,715,310	-				-0.3
1,715,375	+				-0.9
1,715,376	-				-0.5
1,715,376	-				+0.4
1,715,469	+		Pf1N1B4_1488	0.20	-2.6
1,715,495	-		Pf1N1B4_1488	0.28	-1.1
1,715,506	-		Pf1N1B4_1488	0.31	-0.3
1,715,568	+		Pf1N1B4_1488	0.50	-0.6
1,715,574	+		Pf1N1B4_1488	0.52	-0.6
1,715,575	-		Pf1N1B4_1488	0.53	+2.0
1,715,575	-		Pf1N1B4_1488	0.53	+0.2
1,715,575	-		Pf1N1B4_1488	0.53	-1.6
1,715,602	+		Pf1N1B4_1488	0.61	-0.6
1,715,689	-		Pf1N1B4_1488	0.87	-0.0
1,715,689	-		Pf1N1B4_1488	0.87	-0.8
1,715,741	+				-0.0
1,715,742	-				+0.7
1,715,742	-				-0.6
1,715,742	-				+1.0
1,716,223	+		Pf1N1B4_1489	0.12	+1.4
1,716,223	+		Pf1N1B4_1489	0.12	-0.0
1,716,586	-		Pf1N1B4_1489	0.21	-0.6
1,716,696	+		Pf1N1B4_1489	0.24	+1.1
1,716,696	+		Pf1N1B4_1489	0.24	-0.3
1,716,696	+		Pf1N1B4_1489	0.24	+1.2
1,716,697	-		Pf1N1B4_1489	0.24	+0.7
1,716,697	-		Pf1N1B4_1489	0.24	+1.0
1,716,822	+		Pf1N1B4_1489	0.27	-0.6
1,716,822	+		Pf1N1B4_1489	0.27	+1.2
1,716,823	-				+1.7
1,716,981	+		Pf1N1B4_1489	0.31	+2.0
1,716,981	+		Pf1N1B4_1489	0.31	-0.3
1,717,101	+		Pf1N1B4_1489	0.34	+1.8
1,717,101	+				+0.4
1,717,101	+		Pf1N1B4_1489	0.34	+0.4
1,717,103	+		Pf1N1B4_1489	0.34	+1.0
1,717,116	+		Pf1N1B4_1489	0.35	+2.7
1,717,116	+		Pf1N1B4_1489	0.35	+0.0
1,717,131	+		Pf1N1B4_1489	0.35	+0.9
1,717,132	-		Pf1N1B4_1489	0.35	+0.4
1,717,221	+		Pf1N1B4_1489	0.37	+3.2
1,717,221	+		Pf1N1B4_1489	0.37	+0.8
1,717,221	+		Pf1N1B4_1489	0.37	+1.7
1,717,222	-		Pf1N1B4_1489	0.37	+0.7
1,717,222	-		Pf1N1B4_1489	0.37	+1.0
1,717,222	-		Pf1N1B4_1489	0.37	+1.4
1,717,222	-		Pf1N1B4_1489	0.37	+1.4
1,717,222	-		Pf1N1B4_1489	0.37	+0.8
1,717,242	+				+2.4
1,717,242	+		Pf1N1B4_1489	0.38	+3.0
1,717,243	-		Pf1N1B4_1489	0.38	+0.1
1,717,243	-				+1.4
1,717,243	-		Pf1N1B4_1489	0.38	-1.2
1,717,243	-		Pf1N1B4_1489	0.38	+0.4
1,717,297	-		Pf1N1B4_1489	0.39	+1.4
1,717,309	+		Pf1N1B4_1489	0.40	+3.7
1,717,309	+		Pf1N1B4_1489	0.40	+1.3
1,717,353	+		Pf1N1B4_1489	0.41	-0.9
1,717,569	+		Pf1N1B4_1489	0.46	+1.7
1,717,570	-		Pf1N1B4_1489	0.46	+1.0
1,717,989	+		Pf1N1B4_1489	0.57	-0.8
1,717,992	+		Pf1N1B4_1489	0.57	+1.1
1,717,993	-		Pf1N1B4_1489	0.57	+2.2
1,718,682	+		Pf1N1B4_1489	0.74	-0.3
1,718,682	+		Pf1N1B4_1489	0.74	-1.2
1,718,683	-		Pf1N1B4_1489	0.74	+1.2
1,718,892	-		Pf1N1B4_1489	0.80	+2.6
1,718,943	+		Pf1N1B4_1489	0.81	+0.8
1,718,944	-		Pf1N1B4_1489	0.81	+2.2
1,719,039	+		Pf1N1B4_1489	0.83	+1.4
1,719,039	+		Pf1N1B4_1489	0.83	+0.8
1,719,040	-				-0.6
1,719,107	+		Pf1N1B4_1489	0.85	-0.8
1,719,214	+		Pf1N1B4_1489	0.88	-0.9
1,719,215	-		Pf1N1B4_1489	0.88	+0.4
1,719,285	+		Pf1N1B4_1489	0.90	+1.6
1,719,285	+		Pf1N1B4_1489	0.90	+0.4
1,719,285	+		Pf1N1B4_1489	0.90	+1.4
1,719,285	+		Pf1N1B4_1489	0.90	+1.4
1,719,285	+		Pf1N1B4_1489	0.90	-1.2
1,719,285	+		Pf1N1B4_1489	0.90	+0.7
1,719,285	+		Pf1N1B4_1489	0.90	+1.8
1,719,285	+		Pf1N1B4_1489	0.90	+0.8
1,719,286	-		Pf1N1B4_1489	0.90	+1.8
1,719,286	-		Pf1N1B4_1489	0.90	+0.8
1,719,286	-		Pf1N1B4_1489	0.90	+2.7
1,719,286	-		Pf1N1B4_1489	0.90	-0.3
1,719,286	-		Pf1N1B4_1489	0.90	-0.3
1,719,286	-		Pf1N1B4_1489	0.90	+0.9
1,719,605	+				-0.4
1,719,605	+				+0.4
1,719,668	+				+0.4
1,719,669	-				-0.4
1,719,908	+				-0.0
1,719,908	+				+0.4
1,719,909	-				+0.4
1,719,909	-				+0.1
1,719,909	-				-0.6
1,719,909	-				-1.6
1,719,909	-				-0.6
1,719,909	-				-0.2
1,719,909	-				-0.8
1,719,909	-				+0.7
1,719,934	+				+0.8
1,719,988	+				+0.3
1,719,989	-				-0.1
1,719,989	-				-0.6
1,719,989	-				-0.6
1,719,989	-				-1.9
1,720,142	-		Pf1N1B4_1490	0.11	-0.4
1,720,257	+		Pf1N1B4_1490	0.17	+1.4
1,720,257	+		Pf1N1B4_1490	0.17	+1.0
1,720,257	+		Pf1N1B4_1490	0.17	+0.4
1,720,257	+		Pf1N1B4_1490	0.17	-0.4
1,720,258	-		Pf1N1B4_1490	0.17	+2.0
1,720,258	-		Pf1N1B4_1490	0.17	-0.8
1,720,258	-		Pf1N1B4_1490	0.17	-0.6